Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:43:07 (2594051): wrapper (7.7.26015): starting
13:43:07 (2594051): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 13:43:07] Arguments: --nthreads 4
[2026-03-17 13:43:07] Threads: 4
[2026-03-17 13:43:07] Checking for CVMFS
[2026-03-17 13:43:07] No cvmfs_config command found, will try listing directly
[2026-03-17 13:43:07] CVMFS is ok
[2026-03-17 13:43:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 13:43:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 13:43:07] Further information can be found at the LHC@home message board.
[2026-03-17 13:43:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 13:43:07] Checking for apptainer binary...
[2026-03-17 13:43:07] which: no apptainer in ((null))
[2026-03-17 13:43:07] apptainer is not installed, using version from CVMFS
[2026-03-17 13:43:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 13:43:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot184/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-17 13:43:07] apptainer works
[2026-03-17 13:43:07] Set ATHENA_PROC_NUMBER=4
[2026-03-17 13:43:07] Set ATHENA_CORE_NUMBER=4
[2026-03-17 13:43:07] Starting ATLAS job with PandaID=7056962152
[2026-03-17 13:43:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot184/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:54:16 (3278616): wrapper (7.7.26015): starting
15:54:16 (3278616): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 15:54:16] Arguments: --nthreads 4
[2026-03-17 15:54:16] Threads: 4
[2026-03-17 15:54:16] This job has been restarted, cleaning up previous attempt
[2026-03-17 15:54:16] Checking for CVMFS
[2026-03-17 15:54:16] No cvmfs_config command found, will try listing directly
[2026-03-17 15:54:16] CVMFS is ok
[2026-03-17 15:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 15:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 15:54:16] Further information can be found at the LHC@home message board.
[2026-03-17 15:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 15:54:16] Checking for apptainer binary...
[2026-03-17 15:54:16] which: no apptainer in ((null))
[2026-03-17 15:54:16] apptainer is not installed, using version from CVMFS
[2026-03-17 15:54:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 15:54:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot184/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-17 15:54:16] apptainer works
[2026-03-17 15:54:16] Set ATHENA_PROC_NUMBER=4
[2026-03-17 15:54:16] Set ATHENA_CORE_NUMBER=4
[2026-03-17 15:54:16] Starting ATLAS job with PandaID=7056962152
[2026-03-17 15:54:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot184/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 18:56:09]  *** The last 200 lines of the pilot log: ***
[2026-03-17 18:56:09] 2026-03-17 17:49:06,215 | INFO     | preparing for final server update for job 7056962152 in state='finished'
[2026-03-17 18:56:09] 2026-03-17 17:49:06,215 | INFO     | reading metadata from: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7056962152/jobReport.json
[2026-03-17 18:56:09] 2026-03-17 17:49:06,217 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot184/slots/0/workernode_map.json
[2026-03-17 18:56:09] 2026-03-17 17:49:06,218 | INFO     | this job has now completed (state=finished)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,218 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,218 | INFO     | log transfer has been attempted: DONE
[2026-03-17 18:56:09] 2026-03-17 17:49:06,218 | INFO     | job 7056962152 has finished - writing final server update
[2026-03-17 18:56:09] 2026-03-17 17:49:06,218 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3192632/.job.ad'
[2026-03-17 18:56:09] 2026-03-17 17:49:06,218 | INFO     | total number of processed events: 400 (read)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,236 | INFO     | using path: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7056962152/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,236 | INFO     | extracted standard info from prmon json
[2026-03-17 18:56:09] 2026-03-17 17:49:06,236 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 18:56:09] 2026-03-17 17:49:06,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 18:56:09] 2026-03-17 17:49:06,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 18:56:09] 2026-03-17 17:49:06,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 18:56:09] 2026-03-17 17:49:06,239 | INFO     | fitting pss+swap vs Time
[2026-03-17 18:56:09] 2026-03-17 17:49:06,239 | INFO     | sum of square deviations: 1577789583.0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,240 | INFO     | sum of deviations: 20050763379.00002
[2026-03-17 18:56:09] 2026-03-17 17:49:06,240 | INFO     | mean x: 1773764497.5
[2026-03-17 18:56:09] 2026-03-17 17:49:06,240 | INFO     | mean y: 2319768.11627907
[2026-03-17 18:56:09] 2026-03-17 17:49:06,240 | INFO     | intersect: -22538919325.261215
[2026-03-17 18:56:09] 2026-03-17 17:49:06,240 | INFO     | chi2: 1.0562816195572295
[2026-03-17 18:56:09] 2026-03-17 17:49:06,240 | INFO     | sum of square deviations: 1444149868.0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | sum of deviations: 18991758482.999992
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | mean x: 1773764345.0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | mean y: 2318567.9101796406
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | intersect: -23324141373.98601
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | chi2: 1.0564493830125108
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | current chi2=1.0564493830125108 (change=-0.01588245522548877 %)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | right removable region: 166
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | sum of square deviations: 1444149868.0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,241 | INFO     | sum of deviations: 4411355482.999999
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | mean x: 1773764650.0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | mean y: 2337275.347305389
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | intersect: -5415872141.633422
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | chi2: 0.001036088001775148
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | current chi2=0.001036088001775148 (change=99.90191176457188 %)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | sum of square deviations: 1318277740.5
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | sum of deviations: 3840874119.5
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | mean x: 1773764802.5
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | mean y: 2337962.0061728396
[2026-03-17 18:56:09] 2026-03-17 17:49:06,242 | INFO     | intersect: -5165622563.078851
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | chi2: 0.0008944236844650407
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | current chi2=0.0008944236844650407 (change=13.673000465924837 %)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | left removable region: 20
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | sum of square deviations: 964976232.5
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | sum of deviations: 2256843138.5
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | mean x: 1773764924.5
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | mean y: 2338615.4315068494
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | intersect: -4146063246.0307083
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | chi2: 0.00011174724532047071
[2026-03-17 18:56:09] 2026-03-17 17:49:06,243 | INFO     | current memory leak: 2.34 B/s (using 146 data points, chi2=0.00)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | could have reported an average CPU frequency of 3587 MHz (9 samples)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | ..............................
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . Timing measurements:
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . get job = 0 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . initial setup = 0 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . payload setup = 4 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . stage-in = 0 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . payload execution = 10459 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . stage-out = 0 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | . log creation = 0 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,244 | INFO     | ..............................
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | 
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | job summary report
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | --------------------------------------------------
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | PanDA job id: 7056962152
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | task id: 49180212
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | errors: (none)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | pilot state: finished 
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | transexitcode: 0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | exeerrorcode: 0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | exeerrordiag: 
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | exitcode: 0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | exitmsg: OK
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | cpuconsumptiontime: 40489 s
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | nevents: 400
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | neventsw: 0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | pid: 3339977
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | pgrp: 3339977
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | corecount: 4
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | event service: False
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | sizes: {0: 2280325, 10: 2280325, 10466: 2309505, 10469: 2318527, 10472: 2318841}
[2026-03-17 18:56:09] 2026-03-17 17:49:06,294 | INFO     | --------------------------------------------------
[2026-03-17 18:56:09] 2026-03-17 17:49:06,295 | INFO     | 
[2026-03-17 18:56:09] 2026-03-17 17:49:06,295 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot184/slots/0
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,313 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,314 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 18:56:09] 2026-03-17 17:49:06,314 | INFO     | job 7056962152 has completed (purged errors)
[2026-03-17 18:56:09] 2026-03-17 17:49:06,314 | INFO     | overall cleanup function is called
[2026-03-17 18:56:09] 2026-03-17 17:49:07,320 | INFO     | --- collectZombieJob: --- 10, [3339977]
[2026-03-17 18:56:09] 2026-03-17 17:49:07,321 | INFO     | zombie collector waiting for pid 3339977
[2026-03-17 18:56:09] 2026-03-17 17:49:07,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 18:56:09] 2026-03-17 17:49:07,321 | INFO     | collected zombie processes
[2026-03-17 18:56:09] 2026-03-17 17:49:07,321 | INFO     | will attempt to kill all subprocesses of pid=3339977
[2026-03-17 18:56:09] 2026-03-17 17:49:07,831 | INFO     | process IDs to be killed: [3339977] (in reverse order)
[2026-03-17 18:56:09] 2026-03-17 17:49:08,049 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 18:56:09] 2026-03-17 17:49:08,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 18:56:09] 2026-03-17 17:49:08,084 | INFO     | did not find any defunct processes belonging to 3339977
[2026-03-17 18:56:09] 2026-03-17 17:49:08,118 | INFO     | did not find any defunct processes belonging to 3339977
[2026-03-17 18:56:09] 2026-03-17 17:49:08,119 | INFO     | ready for new job
[2026-03-17 18:56:09] 2026-03-17 17:49:08,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 18:56:09] 2026-03-17 17:49:08,120 | INFO     | **************************************
[2026-03-17 18:56:09] 2026-03-17 17:49:08,120 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 18:56:09] 2026-03-17 17:49:08,120 | INFO     | **************************************
[2026-03-17 18:56:09] 2026-03-17 17:49:08,120 | INFO     | 
[2026-03-17 18:56:09] 2026-03-17 17:49:08,127 | INFO     | architecture information:
[2026-03-17 18:56:09] 2026-03-17 17:49:08,128 | INFO     | executing command: cat /etc/os-release
[2026-03-17 18:56:09] 2026-03-17 17:49:08,143 | INFO     | cat /etc/os-release:
[2026-03-17 18:56:09] NAME="CentOS Linux"
[2026-03-17 18:56:09] VERSION="7 (Core)"
[2026-03-17 18:56:09] ID="centos"
[2026-03-17 18:56:09] ID_LIKE="rhel fedora"
[2026-03-17 18:56:09] VERSION_ID="7"
[2026-03-17 18:56:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 18:56:09] ANSI_COLOR="0;31"
[2026-03-17 18:56:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 18:56:09] HOME_URL="https://www.centos.org/"
[2026-03-17 18:56:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 18:56:09] 
[2026-03-17 18:56:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 18:56:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 18:56:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 18:56:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 18:56:09] 
[2026-03-17 18:56:09] 2026-03-17 17:49:08,143 | INFO     | **************************************
[2026-03-17 18:56:09] 2026-03-17 17:49:08,644 | INFO     | executing command: df -mP /var/lib/boinc/var/slot184/slots/0
[2026-03-17 18:56:09] 2026-03-17 17:49:08,659 | INFO     | sufficient remaining disk space (29222764544 B)
[2026-03-17 18:56:09] 2026-03-17 17:49:08,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 18:56:09] 2026-03-17 17:49:08,659 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 18:56:09] 2026-03-17 17:49:08,659 | INFO     | update_server=False
[2026-03-17 18:56:09] 2026-03-17 17:49:08,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 18:56:09] 2026-03-17 17:49:08,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 18:56:09] 2026-03-17 17:49:08,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 18:56:09] 2026-03-17 17:49:08,784 | INFO     | all data control threads have been joined
[2026-03-17 18:56:09] 2026-03-17 17:49:08,872 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 18:56:09] 2026-03-17 17:49:08,873 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 18:56:09] 2026-03-17 17:49:08,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 18:56:09] 2026-03-17 17:49:08,873 | INFO     | will abort loop
[2026-03-17 18:56:09] 2026-03-17 17:49:09,122 | INFO     | all payload control threads have been joined
[2026-03-17 18:56:09] 2026-03-17 17:49:09,665 | INFO     | [job] retrieve thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:09,758 | INFO     | [payload] validate_post thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:09,790 | INFO     | [data] control thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:09,878 | INFO     | [job] job monitor thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:10,033 | INFO     | all job control threads have been joined
[2026-03-17 18:56:09] 2026-03-17 17:49:10,128 | INFO     | [payload] control thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:10,254 | INFO     | [payload] failed_post thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:10,272 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:10,297 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:10,601 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:10,665 | INFO     | [data] copytool_out thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:10,854 | INFO     | [data] copytool_in thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:11,039 | INFO     | [job] control thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:11,108 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:11,134 | INFO     | [job] validate thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:11,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 18:56:09] 2026-03-17 17:49:12,309 | INFO     | [job] queue monitor thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:12,665 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 18:56:09] 2026-03-17 17:49:38,627 | INFO     | PID=3302722 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 18:56:09] 2026-03-17 17:49:38,627 | INFO     | .. there are 37 such processes running
[2026-03-17 18:56:09] 2026-03-17 17:49:38,631 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 18:56:09] 2026-03-17 17:49:38,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 18:56:09] 2026-03-17 17:49:38,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 18:56:09] 2026-03-17 17:49:40,015 | INFO     | [monitor] cgroup control has ended
[2026-03-17 18:56:09] 2026-03-17 17:49:42,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23322241181504)>', '<ExcThread(monitor, started 23321936647936)>']
[2026-03-17 18:56:09] 2026-03-17 17:49:42,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 18:56:09] 2026-03-17 17:49:42,652 | INFO     | [monitor] control thread has ended
[2026-03-17 18:56:09] 2026-03-17 17:49:47,094 | INFO     | all workflow threads have been joined
[2026-03-17 18:56:09] 2026-03-17 17:49:47,095 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 18:56:09] 2026-03-17 17:49:47,095 | INFO     | traces error code: 0
[2026-03-17 18:56:09] 2026-03-17 17:49:47,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 18:56:09] 2026-03-17 17:49:47,328 [wrapper] ==== pilot stdout END ====
[2026-03-17 18:56:09] 2026-03-17 17:49:47,331 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 18:56:09] 2026-03-17 17:49:47,333 [wrapper] pilotpid: 3302722
[2026-03-17 18:56:09] 2026-03-17 17:49:47,335 [wrapper] Pilot exit status: 0
[2026-03-17 18:56:09] 2026-03-17 17:49:47,345 [wrapper] pandaids: 7056962152 7056962152
[2026-03-17 18:56:09] 2026-03-17 17:49:47,489 [wrapper] cleanup supervisor_pilot 3971909 3302723
[2026-03-17 18:56:09] 2026-03-17 17:49:47,492 [wrapper] Test setup, not cleaning
[2026-03-17 18:56:09] 2026-03-17 17:49:47,494 [wrapper] apfmon messages muted
[2026-03-17 18:56:09] 2026-03-17 17:49:47,498 [wrapper] ==== wrapper stdout END ====
[2026-03-17 18:56:09] 2026-03-17 17:49:47,503 [wrapper] ==== wrapper stderr END ====
[2026-03-17 18:56:09]  *** Error codes and diagnostics ***
[2026-03-17 18:56:09]     "exeErrorCode": 0,
[2026-03-17 18:56:09]     "exeErrorDiag": "",
[2026-03-17 18:56:09]     "pilotErrorCode": 0,
[2026-03-17 18:56:09]     "pilotErrorDiag": "",
[2026-03-17 18:56:09]  *** Listing of results directory ***
[2026-03-17 18:56:09] total 690516
[2026-03-17 18:56:09] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:57 pilot3.tar.gz
[2026-03-17 18:56:09] -rwx------. 1 boinc boinc     36322 Mar 16 16:58 runpilot2-wrapper.sh
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:58 queuedata.json
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc       100 Mar 17 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 18:56:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 13:43 run_atlas
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc       105 Mar 17 13:43 job.xml
[2026-03-17 18:56:09] -rw-r--r--. 3 boinc boinc 235453734 Mar 17 13:43 EVNT.49132881._000004.pool.root.1
[2026-03-17 18:56:09] -rw-r--r--. 3 boinc boinc 235453734 Mar 17 13:43 ATLAS.root_0
[2026-03-17 18:56:09] -rw-r--r--. 2 boinc boinc     15845 Mar 17 13:43 start_atlas.sh
[2026-03-17 18:56:09] drwxrwx--x. 2 boinc boinc      4096 Mar 17 13:43 shared
[2026-03-17 18:56:09] -rw-r--r--. 2 boinc boinc    597544 Mar 17 13:43 input.tar.gz
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc         0 Mar 17 13:43 boinc_lockfile
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc      6716 Mar 17 15:54 init_data.xml
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc      2622 Mar 17 15:54 pandaJob.out
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc   1010282 Mar 17 15:54 agis_schedconf.cvmfs.json
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc       444 Mar 17 15:54 workernode_map.json
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc 228588012 Mar 17 18:48 HITS.49180212._000091.pool.root.1
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc       529 Mar 17 18:48 boinc_task_state.xml
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc      1028 Mar 17 18:48 memory_monitor_summary.json
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc   1511579 Mar 17 18:49 agis_ddmendpoints.agis.ALL.json
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc    351960 Mar 17 18:49 log.49180212._000091.job.log.tgz.1
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc      6344 Mar 17 18:49 heartbeat.json
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc        96 Mar 17 18:49 pilot_heartbeat.json
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc      5016 Mar 17 18:49 pilotlog.txt
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc   1473351 Mar 17 18:49 log.49180212._000091.job.log.1
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc       357 Mar 17 18:49 output.list
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc       620 Mar 17 18:49 runtime_log
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc   1843200 Mar 17 18:49 result.tar.gz
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc      9299 Mar 17 18:49 runtime_log.err
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc       791 Mar 17 18:49 LPMNDmaVPM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBEyLDm992Vgm.diag
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc      8192 Mar 17 18:56 boinc_mmap_file
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc        27 Mar 17 18:56 wrapper_checkpoint.txt
[2026-03-17 18:56:09] -rw-r--r--. 1 boinc boinc     23055 Mar 17 18:56 stderr.txt
[2026-03-17 18:56:09] HITS file was successfully produced:
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc 228588012 Mar 17 18:48 shared/HITS.pool.root.1
[2026-03-17 18:56:09]  *** Contents of shared directory: ***
[2026-03-17 18:56:09] total 455576
[2026-03-17 18:56:09] -rw-r--r--. 3 boinc boinc 235453734 Mar 17 13:43 ATLAS.root_0
[2026-03-17 18:56:09] -rw-r--r--. 2 boinc boinc     15845 Mar 17 13:43 start_atlas.sh
[2026-03-17 18:56:09] -rw-r--r--. 2 boinc boinc    597544 Mar 17 13:43 input.tar.gz
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc 228588012 Mar 17 18:48 HITS.pool.root.1
[2026-03-17 18:56:09] -rw-------. 1 boinc boinc   1843200 Mar 17 18:49 result.tar.gz
18:56:11 (3278616): run_atlas exited; CPU time 41037.687402
18:56:11 (3278616): called boinc_finish(0)

</stderr_txt>
]]>

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