Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:40:06 (250380): wrapper (7.7.26015): starting
13:40:06 (250380): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 13:40:06] Arguments: --nthreads 4
[2026-03-17 13:40:06] Threads: 4
[2026-03-17 13:40:06] Checking for CVMFS
[2026-03-17 13:40:06] No cvmfs_config command found, will try listing directly
[2026-03-17 13:40:06] CVMFS is ok
[2026-03-17 13:40:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 13:40:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 13:40:06] Further information can be found at the LHC@home message board.
[2026-03-17 13:40:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 13:40:06] Checking for apptainer binary...
[2026-03-17 13:40:06] which: no apptainer in ((null))
[2026-03-17 13:40:06] apptainer is not installed, using version from CVMFS
[2026-03-17 13:40:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 13:40:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot184/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-17 13:40:06] apptainer works
[2026-03-17 13:40:06] Set ATHENA_PROC_NUMBER=4
[2026-03-17 13:40:06] Set ATHENA_CORE_NUMBER=4
[2026-03-17 13:40:06] Starting ATLAS job with PandaID=7056943912
[2026-03-17 13:40:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot184/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:52:58 (923882): wrapper (7.7.26015): starting
15:52:58 (923882): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 15:52:58] Arguments: --nthreads 4
[2026-03-17 15:52:58] Threads: 4
[2026-03-17 15:52:58] This job has been restarted, cleaning up previous attempt
[2026-03-17 15:52:58] Checking for CVMFS
[2026-03-17 15:52:58] No cvmfs_config command found, will try listing directly
[2026-03-17 15:52:58] CVMFS is ok
[2026-03-17 15:52:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 15:52:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 15:52:58] Further information can be found at the LHC@home message board.
[2026-03-17 15:52:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 15:52:58] Checking for apptainer binary...
[2026-03-17 15:52:58] which: no apptainer in ((null))
[2026-03-17 15:52:58] apptainer is not installed, using version from CVMFS
[2026-03-17 15:52:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 15:52:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot184/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-17 15:52:58] apptainer works
[2026-03-17 15:52:58] Set ATHENA_PROC_NUMBER=4
[2026-03-17 15:52:58] Set ATHENA_CORE_NUMBER=4
[2026-03-17 15:52:58] Starting ATLAS job with PandaID=7056943912
[2026-03-17 15:52:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot184/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 20:01:43]  *** The last 200 lines of the pilot log: ***
[2026-03-17 20:01:43] 2026-03-17 19:00:30,937 | INFO     | job 7056943912 has state=finished
[2026-03-17 20:01:43] 2026-03-17 19:00:30,937 | INFO     | preparing for final server update for job 7056943912 in state='finished'
[2026-03-17 20:01:43] 2026-03-17 19:00:31,595 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,596 | INFO     | reading metadata from: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7056943912/jobReport.json
[2026-03-17 20:01:43] 2026-03-17 19:00:31,597 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot184/slots/0/workernode_map.json
[2026-03-17 20:01:43] 2026-03-17 19:00:31,597 | INFO     | this job has now completed (state=finished)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,597 | INFO     | log transfer has been attempted: DONE
[2026-03-17 20:01:43] 2026-03-17 19:00:31,597 | INFO     | job 7056943912 has finished - writing final server update
[2026-03-17 20:01:43] 2026-03-17 19:00:31,598 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_871023/.job.ad'
[2026-03-17 20:01:43] 2026-03-17 19:00:31,598 | INFO     | total number of processed events: 400 (read)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,615 | INFO     | using path: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7056943912/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,615 | INFO     | extracted standard info from prmon json
[2026-03-17 20:01:43] 2026-03-17 19:00:31,615 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 20:01:43] 2026-03-17 19:00:31,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 20:01:43] 2026-03-17 19:00:31,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 20:01:43] 2026-03-17 19:00:31,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 20:01:43] 2026-03-17 19:00:31,618 | INFO     | fitting pss+swap vs Time
[2026-03-17 20:01:43] 2026-03-17 19:00:31,618 | INFO     | sum of square deviations: 4449281562.0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,619 | INFO     | sum of deviations: 33745639261.0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,619 | INFO     | mean x: 1773766584.0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,619 | INFO     | mean y: 2331572.633744856
[2026-03-17 20:01:43] 2026-03-17 19:00:31,619 | INFO     | intersect: -13450826300.785696
[2026-03-17 20:01:43] 2026-03-17 19:00:31,620 | INFO     | chi2: 1.0572863964175907
[2026-03-17 20:01:43] 2026-03-17 19:00:31,620 | INFO     | sum of square deviations: 4180243959.5
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | sum of deviations: 32827700738.499996
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | mean x: 1773766431.5
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | mean y: 2331052.2394957985
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | intersect: -13927160661.024961
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | chi2: 1.0575212812852222
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | current chi2=1.0575212812852222 (change=-0.022215822356867462 %)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | right removable region: 237
[2026-03-17 20:01:43] 2026-03-17 19:00:31,621 | INFO     | sum of square deviations: 4180243959.5
[2026-03-17 20:01:43] 2026-03-17 19:00:31,622 | INFO     | sum of deviations: 10980935038.5
[2026-03-17 20:01:43] 2026-03-17 19:00:31,622 | INFO     | mean x: 1773766736.5
[2026-03-17 20:01:43] 2026-03-17 19:00:31,622 | INFO     | mean y: 2344305.3151260503
[2026-03-17 20:01:43] 2026-03-17 19:00:31,622 | INFO     | intersect: -4657100812.162746
[2026-03-17 20:01:43] 2026-03-17 19:00:31,622 | INFO     | chi2: 0.0006422343568125582
[2026-03-17 20:01:43] 2026-03-17 19:00:31,622 | INFO     | current chi2=0.0006422343568125582 (change=99.9392563491795 %)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,623 | INFO     | sum of square deviations: 3922276332.0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,623 | INFO     | sum of deviations: 9975884489.999998
[2026-03-17 20:01:43] 2026-03-17 19:00:31,623 | INFO     | mean x: 1773766889.0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,623 | INFO     | mean y: 2344898.9356223177
[2026-03-17 20:01:43] 2026-03-17 19:00:31,623 | INFO     | intersect: -4509038822.931796
[2026-03-17 20:01:43] 2026-03-17 19:00:31,624 | INFO     | chi2: 0.0005537500489279563
[2026-03-17 20:01:43] 2026-03-17 19:00:31,624 | INFO     | current chi2=0.0005537500489279563 (change=13.777573084653094 %)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,624 | INFO     | left removable region: 20
[2026-03-17 20:01:43] 2026-03-17 19:00:31,624 | INFO     | sum of square deviations: 3168461268.0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | sum of deviations: 7785509788.000001
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | mean x: 1773767011.0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | mean y: 2345725.8479262674
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | intersect: -4356135965.32609
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | chi2: 0.0003451180304239146
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | current memory leak: 2.46 B/s (using 217 data points, chi2=0.00)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | could have reported an average CPU frequency of 3544 MHz (12 samples)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | ..............................
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . Timing measurements:
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . get job = 0 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . initial setup = 0 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . payload setup = 3 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . stage-in = 0 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . payload execution = 14823 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . stage-out = 0 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | . log creation = 0 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,625 | INFO     | ..............................
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | 
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | job summary report
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | --------------------------------------------------
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | PanDA job id: 7056943912
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | task id: 49178885
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | errors: (none)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | pilot state: finished 
[2026-03-17 20:01:43] 2026-03-17 19:00:31,672 | INFO     | transexitcode: 0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | exeerrorcode: 0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | exeerrordiag: 
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | exitcode: 0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | exitmsg: OK
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | cpuconsumptiontime: 57533 s
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | nevents: 400
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | neventsw: 0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | pid: 973377
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | pgrp: 973377
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | corecount: 4
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | event service: False
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | sizes: {0: 2280307, 10: 2280307, 14831: 2311608, 14833: 2320686, 14836: 2320824}
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | --------------------------------------------------
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | 
[2026-03-17 20:01:43] 2026-03-17 19:00:31,673 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot184/slots/0
[2026-03-17 20:01:43] 2026-03-17 19:00:31,690 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | job 7056943912 has completed (purged errors)
[2026-03-17 20:01:43] 2026-03-17 19:00:31,691 | INFO     | overall cleanup function is called
[2026-03-17 20:01:43] 2026-03-17 19:00:32,698 | INFO     | --- collectZombieJob: --- 10, [973377]
[2026-03-17 20:01:43] 2026-03-17 19:00:32,698 | INFO     | zombie collector waiting for pid 973377
[2026-03-17 20:01:43] 2026-03-17 19:00:32,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 20:01:43] 2026-03-17 19:00:32,699 | INFO     | collected zombie processes
[2026-03-17 20:01:43] 2026-03-17 19:00:32,699 | INFO     | will attempt to kill all subprocesses of pid=973377
[2026-03-17 20:01:43] 2026-03-17 19:00:33,163 | INFO     | process IDs to be killed: [973377] (in reverse order)
[2026-03-17 20:01:43] 2026-03-17 19:00:33,389 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 20:01:43] 2026-03-17 19:00:33,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 20:01:43] 2026-03-17 19:00:33,419 | INFO     | did not find any defunct processes belonging to 973377
[2026-03-17 20:01:43] 2026-03-17 19:00:33,449 | INFO     | did not find any defunct processes belonging to 973377
[2026-03-17 20:01:43] 2026-03-17 19:00:33,449 | INFO     | ready for new job
[2026-03-17 20:01:43] 2026-03-17 19:00:33,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 20:01:43] 2026-03-17 19:00:33,451 | INFO     | **************************************
[2026-03-17 20:01:43] 2026-03-17 19:00:33,451 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 20:01:43] 2026-03-17 19:00:33,451 | INFO     | **************************************
[2026-03-17 20:01:43] 2026-03-17 19:00:33,451 | INFO     | 
[2026-03-17 20:01:43] 2026-03-17 19:00:33,457 | INFO     | architecture information:
[2026-03-17 20:01:43] 2026-03-17 19:00:33,457 | INFO     | executing command: cat /etc/os-release
[2026-03-17 20:01:43] 2026-03-17 19:00:33,468 | INFO     | cat /etc/os-release:
[2026-03-17 20:01:43] NAME="CentOS Linux"
[2026-03-17 20:01:43] VERSION="7 (Core)"
[2026-03-17 20:01:43] ID="centos"
[2026-03-17 20:01:43] ID_LIKE="rhel fedora"
[2026-03-17 20:01:43] VERSION_ID="7"
[2026-03-17 20:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 20:01:43] ANSI_COLOR="0;31"
[2026-03-17 20:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 20:01:43] HOME_URL="https://www.centos.org/"
[2026-03-17 20:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 20:01:43] 
[2026-03-17 20:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 20:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 20:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 20:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 20:01:43] 
[2026-03-17 20:01:43] 2026-03-17 19:00:33,469 | INFO     | **************************************
[2026-03-17 20:01:43] 2026-03-17 19:00:33,972 | INFO     | executing command: df -mP /var/lib/boinc/var/slot184/slots/0
[2026-03-17 20:01:43] 2026-03-17 19:00:33,984 | INFO     | sufficient remaining disk space (24831328256 B)
[2026-03-17 20:01:43] 2026-03-17 19:00:33,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 20:01:43] 2026-03-17 19:00:33,985 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 20:01:43] 2026-03-17 19:00:33,985 | INFO     | update_server=False
[2026-03-17 20:01:43] 2026-03-17 19:00:33,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 20:01:43] 2026-03-17 19:00:33,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 20:01:43] 2026-03-17 19:00:33,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 20:01:43] 2026-03-17 19:00:33,986 | INFO     | aborting loop
[2026-03-17 20:01:43] 2026-03-17 19:00:34,447 | INFO     | all data control threads have been joined
[2026-03-17 20:01:43] 2026-03-17 19:00:34,604 | INFO     | all job control threads have been joined
[2026-03-17 20:01:43] 2026-03-17 19:00:34,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 20:01:43] 2026-03-17 19:00:34,990 | INFO     | [job] retrieve thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:34,991 | INFO     | [job] job monitor thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,038 | INFO     | all payload control threads have been joined
[2026-03-17 20:01:43] 2026-03-17 19:00:35,075 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,434 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,452 | INFO     | [data] control thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,531 | INFO     | [payload] validate_post thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,588 | INFO     | [job] validate thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,610 | INFO     | [job] control thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,903 | INFO     | [data] copytool_in thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:35,991 | INFO     | [data] copytool_out thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:36,004 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:36,043 | INFO     | [payload] control thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:36,560 | INFO     | [payload] failed_post thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:36,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 20:01:43] 2026-03-17 19:00:37,684 | INFO     | [job] queue monitor thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:00:38,783 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 20:01:43] 2026-03-17 19:01:03,732 | INFO     | PID=947359 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-17 20:01:43] 2026-03-17 19:01:03,733 | INFO     | .. there are 38 such processes running
[2026-03-17 20:01:43] 2026-03-17 19:01:03,733 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 20:01:43] 2026-03-17 19:01:03,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 20:01:43] 2026-03-17 19:01:03,733 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 20:01:43] 2026-03-17 19:01:29,222 | INFO     | [monitor] cgroup control has ended
[2026-03-17 20:01:43] 2026-03-17 19:01:29,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22409433737024)>', '<ExcThread(monitor, started 22409126082304)>']
[2026-03-17 20:01:43] 2026-03-17 19:01:30,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 20:01:43] 2026-03-17 19:01:30,856 | INFO     | [monitor] control thread has ended
[2026-03-17 20:01:43] 2026-03-17 19:01:34,979 | INFO     | all workflow threads have been joined
[2026-03-17 20:01:43] 2026-03-17 19:01:34,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 20:01:43] 2026-03-17 19:01:34,979 | INFO     | traces error code: 0
[2026-03-17 20:01:43] 2026-03-17 19:01:34,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 20:01:43] 2026-03-17 19:01:35,114 [wrapper] ==== pilot stdout END ====
[2026-03-17 20:01:43] 2026-03-17 19:01:35,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 20:01:43] 2026-03-17 19:01:35,119 [wrapper] pilotpid: 947359
[2026-03-17 20:01:43] 2026-03-17 19:01:35,121 [wrapper] Pilot exit status: 0
[2026-03-17 20:01:43] 2026-03-17 19:01:35,128 [wrapper] pandaids: 7056943912 7056943912
[2026-03-17 20:01:43] 2026-03-17 19:01:35,270 [wrapper] cleanup supervisor_pilot 2190886 947361
[2026-03-17 20:01:43] 2026-03-17 19:01:35,272 [wrapper] Test setup, not cleaning
[2026-03-17 20:01:43] 2026-03-17 19:01:35,273 [wrapper] apfmon messages muted
[2026-03-17 20:01:43] 2026-03-17 19:01:35,275 [wrapper] ==== wrapper stdout END ====
[2026-03-17 20:01:43] 2026-03-17 19:01:35,276 [wrapper] ==== wrapper stderr END ====
[2026-03-17 20:01:43]  *** Error codes and diagnostics ***
[2026-03-17 20:01:43]     "exeErrorCode": 0,
[2026-03-17 20:01:43]     "exeErrorDiag": "",
[2026-03-17 20:01:43]     "pilotErrorCode": 0,
[2026-03-17 20:01:43]     "pilotErrorDiag": "",
[2026-03-17 20:01:43]  *** Listing of results directory ***
[2026-03-17 20:01:43] total 734340
[2026-03-17 20:01:43] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc    585013 Mar 16 15:05 pilot3.tar.gz
[2026-03-17 20:01:43] -rwx------. 1 boinc boinc     36322 Mar 16 15:06 runpilot2-wrapper.sh
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc      5111 Mar 16 15:07 queuedata.json
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc       100 Mar 17 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 20:01:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 13:40 run_atlas
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc       105 Mar 17 13:40 job.xml
[2026-03-17 20:01:43] -rw-r--r--. 3 boinc boinc 244603584 Mar 17 13:40 EVNT.49129985._000006.pool.root.1
[2026-03-17 20:01:43] -rw-r--r--. 3 boinc boinc 244603584 Mar 17 13:40 ATLAS.root_0
[2026-03-17 20:01:43] -rw-r--r--. 2 boinc boinc     15845 Mar 17 13:40 start_atlas.sh
[2026-03-17 20:01:43] drwxrwx--x. 2 boinc boinc      4096 Mar 17 13:40 shared
[2026-03-17 20:01:43] -rw-r--r--. 2 boinc boinc    597530 Mar 17 13:40 input.tar.gz
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc         0 Mar 17 13:40 boinc_lockfile
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc      2602 Mar 17 15:52 pandaJob.out
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc   1010282 Mar 17 15:53 agis_schedconf.cvmfs.json
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc       444 Mar 17 15:53 workernode_map.json
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc      6715 Mar 17 19:41 init_data.xml
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc 253885730 Mar 17 19:59 HITS.49178885._000137.pool.root.1
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc       530 Mar 17 19:59 boinc_task_state.xml
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc        96 Mar 17 20:00 pilot_heartbeat.json
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc      1032 Mar 17 20:00 memory_monitor_summary.json
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc   1511579 Mar 17 20:00 agis_ddmendpoints.agis.ALL.json
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc    409717 Mar 17 20:00 log.49178885._000137.job.log.tgz.1
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc      6363 Mar 17 20:00 heartbeat.json
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc      4829 Mar 17 20:01 pilotlog.txt
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc   2060533 Mar 17 20:01 log.49178885._000137.job.log.1
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc       357 Mar 17 20:01 output.list
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc       620 Mar 17 20:01 runtime_log
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc   2488320 Mar 17 20:01 result.tar.gz
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc       790 Mar 17 20:01 slnKDmMlNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUYxLDmo0Cv4n.diag
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc      9299 Mar 17 20:01 runtime_log.err
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc        27 Mar 17 20:01 wrapper_checkpoint.txt
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc      8192 Mar 17 20:01 boinc_mmap_file
[2026-03-17 20:01:43] -rw-r--r--. 1 boinc boinc      3891 Mar 17 20:01 stderr.txt
[2026-03-17 20:01:43] HITS file was successfully produced:
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc 253885730 Mar 17 19:59 shared/HITS.pool.root.1
[2026-03-17 20:01:43]  *** Contents of shared directory: ***
[2026-03-17 20:01:43] total 489848
[2026-03-17 20:01:43] -rw-r--r--. 3 boinc boinc 244603584 Mar 17 13:40 ATLAS.root_0
[2026-03-17 20:01:43] -rw-r--r--. 2 boinc boinc     15845 Mar 17 13:40 start_atlas.sh
[2026-03-17 20:01:43] -rw-r--r--. 2 boinc boinc    597530 Mar 17 13:40 input.tar.gz
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc 253885730 Mar 17 19:59 HITS.pool.root.1
[2026-03-17 20:01:43] -rw-------. 1 boinc boinc   2488320 Mar 17 20:01 result.tar.gz
20:01:44 (923882): run_atlas exited; CPU time 58300.606973
20:01:44 (923882): called boinc_finish(0)

</stderr_txt>
]]>

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