Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:12:16 (3434909): wrapper (7.7.26015): starting
14:12:16 (3434909): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 14:12:16] Arguments: --nthreads 4
[2026-03-18 14:12:16] Threads: 4
[2026-03-18 14:12:16] Checking for CVMFS
[2026-03-18 14:12:16] No cvmfs_config command found, will try listing directly
[2026-03-18 14:12:16] CVMFS is ok
[2026-03-18 14:12:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 14:12:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 14:12:16] Further information can be found at the LHC@home message board.
[2026-03-18 14:12:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 14:12:16] Checking for apptainer binary...
[2026-03-18 14:12:16] which: no apptainer in ((null))
[2026-03-18 14:12:16] apptainer is not installed, using version from CVMFS
[2026-03-18 14:12:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 14:12:16] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-18 14:12:16] apptainer works
[2026-03-18 14:12:16] Set ATHENA_PROC_NUMBER=4
[2026-03-18 14:12:16] Set ATHENA_CORE_NUMBER=4
[2026-03-18 14:12:16] Starting ATLAS job with PandaID=7056958741
[2026-03-18 14:12:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:42:38 (3637689): wrapper (7.7.26015): starting
17:42:38 (3637689): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 17:42:38] Arguments: --nthreads 4
[2026-03-18 17:42:38] Threads: 4
[2026-03-18 17:42:38] This job has been restarted, cleaning up previous attempt
[2026-03-18 17:42:38] Checking for CVMFS
[2026-03-18 17:42:38] No cvmfs_config command found, will try listing directly
[2026-03-18 17:42:38] CVMFS is ok
[2026-03-18 17:42:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 17:42:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 17:42:38] Further information can be found at the LHC@home message board.
[2026-03-18 17:42:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 17:42:38] Checking for apptainer binary...
[2026-03-18 17:42:38] which: no apptainer in ((null))
[2026-03-18 17:42:38] apptainer is not installed, using version from CVMFS
[2026-03-18 17:42:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 17:42:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-18 17:42:39] apptainer works
[2026-03-18 17:42:39] Set ATHENA_PROC_NUMBER=4
[2026-03-18 17:42:39] Set ATHENA_CORE_NUMBER=4
[2026-03-18 17:42:39] Starting ATLAS job with PandaID=7056958741
[2026-03-18 17:42:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 01:01:56]  *** The last 200 lines of the pilot log: ***
[2026-03-19 01:01:56] 2026-03-19 00:01:23,688 | INFO     | extracted standard info from prmon json
[2026-03-19 01:01:56] 2026-03-19 00:01:23,689 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 01:01:56] 2026-03-19 00:01:23,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 01:01:56] 2026-03-19 00:01:23,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 01:01:56] 2026-03-19 00:01:23,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 01:01:56] 2026-03-19 00:01:23,696 | INFO     | fitting pss+swap vs Time
[2026-03-19 01:01:56] 2026-03-19 00:01:23,697 | INFO     | sum of square deviations: 24826065480.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,701 | INFO     | sum of deviations: 39022790557.99999
[2026-03-19 01:01:56] 2026-03-19 00:01:23,701 | INFO     | mean x: 1773865304.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,701 | INFO     | mean y: 2337819.612529002
[2026-03-19 01:01:56] 2026-03-19 00:01:23,701 | INFO     | intersect: -2785908038.0268908
[2026-03-19 01:01:56] 2026-03-19 00:01:23,702 | INFO     | chi2: 1.0709707792665824
[2026-03-19 01:01:56] 2026-03-19 00:01:23,703 | INFO     | sum of square deviations: 23972030862.5
[2026-03-19 01:01:56] 2026-03-19 00:01:23,707 | INFO     | sum of deviations: 38489474542.50001
[2026-03-19 01:01:56] 2026-03-19 00:01:23,707 | INFO     | mean x: 1773865151.5
[2026-03-19 01:01:56] 2026-03-19 00:01:23,707 | INFO     | mean y: 2337724.3779342724
[2026-03-19 01:01:56] 2026-03-19 00:01:23,707 | INFO     | intersect: -2845778815.355524
[2026-03-19 01:01:56] 2026-03-19 00:01:23,708 | INFO     | chi2: 1.071091332695516
[2026-03-19 01:01:56] 2026-03-19 00:01:23,708 | INFO     | current chi2=1.071091332695516 (change=-0.011256462946285658 %)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,709 | INFO     | right removable region: 425
[2026-03-19 01:01:56] 2026-03-19 00:01:23,709 | INFO     | sum of square deviations: 23972030862.5
[2026-03-19 01:01:56] 2026-03-19 00:01:23,714 | INFO     | sum of deviations: -3170555337.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,714 | INFO     | mean x: 1773865456.5
[2026-03-19 01:01:56] 2026-03-19 00:01:23,714 | INFO     | mean y: 2345299.7417840376
[2026-03-19 01:01:56] 2026-03-19 00:01:23,714 | INFO     | intersect: 236957820.57847232
[2026-03-19 01:01:56] 2026-03-19 00:01:23,714 | INFO     | chi2: 0.003399278459363138
[2026-03-19 01:01:56] 2026-03-19 00:01:23,715 | INFO     | current chi2=0.003399278459363138 (change=99.68259839342294 %)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,715 | INFO     | sum of square deviations: 23137810570.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,719 | INFO     | sum of deviations: -1074906375.9999988
[2026-03-19 01:01:56] 2026-03-19 00:01:23,719 | INFO     | mean x: 1773865609.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,719 | INFO     | mean y: 2344917.9596199524
[2026-03-19 01:01:56] 2026-03-19 00:01:23,720 | INFO     | intersect: 84752864.36028153
[2026-03-19 01:01:56] 2026-03-19 00:01:23,720 | INFO     | chi2: 0.00216521923668904
[2026-03-19 01:01:56] 2026-03-19 00:01:23,720 | INFO     | current chi2=0.00216521923668904 (change=36.303563754094505 %)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,721 | INFO     | sum of square deviations: 22323172040.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,725 | INFO     | sum of deviations: 468848836.4999995
[2026-03-19 01:01:56] 2026-03-19 00:01:23,725 | INFO     | mean x: 1773865761.5
[2026-03-19 01:01:56] 2026-03-19 00:01:23,725 | INFO     | mean y: 2344628.7860576925
[2026-03-19 01:01:56] 2026-03-19 00:01:23,725 | INFO     | intersect: -34911496.68285934
[2026-03-19 01:01:56] 2026-03-19 00:01:23,726 | INFO     | chi2: 0.0016359314826985382
[2026-03-19 01:01:56] 2026-03-19 00:01:23,726 | INFO     | current chi2=0.0016359314826985382 (change=24.444995916435033 %)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,726 | INFO     | left removable region: 30
[2026-03-19 01:01:56] 2026-03-19 00:01:23,726 | INFO     | sum of square deviations: 19110274590.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,730 | INFO     | sum of deviations: 3697566544.9999995
[2026-03-19 01:01:56] 2026-03-19 00:01:23,730 | INFO     | mean x: 1773866036.0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,730 | INFO     | mean y: 2343930.8
[2026-03-19 01:01:56] 2026-03-19 00:01:23,730 | INFO     | intersect: -340873937.63698953
[2026-03-19 01:01:56] 2026-03-19 00:01:23,731 | INFO     | chi2: 0.0004123074425978316
[2026-03-19 01:01:56] 2026-03-19 00:01:23,731 | INFO     | current memory leak: 0.19 B/s (using 395 data points, chi2=0.00)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | could have reported an average CPU frequency of 2639 MHz (18 samples)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | ..............................
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | . Timing measurements:
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | . get job = 0 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | . initial setup = 1 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | . payload setup = 7 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | . stage-in = 0 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | . payload execution = 26291 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,732 | INFO     | . stage-out = 1 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,733 | INFO     | . log creation = 0 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,733 | INFO     | ..............................
[2026-03-19 01:01:56] 2026-03-19 00:01:23,904 | INFO     | 
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | job summary report
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | --------------------------------------------------
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | PanDA job id: 7056958741
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | task id: 49179692
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | errors: (none)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | pilot state: finished 
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | transexitcode: 0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,905 | INFO     | exeerrorcode: 0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | exeerrordiag: 
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | exitcode: 0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | exitmsg: OK
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | cpuconsumptiontime: 93583 s
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | nevents: 400
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | neventsw: 0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | pid: 3650800
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | pgrp: 3650800
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | corecount: 4
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | event service: False
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | sizes: {0: 2280070, 1: 2280332, 11: 2280360, 26302: 2317438, 26304: 2326514, 26306: 2326652}
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | --------------------------------------------------
[2026-03-19 01:01:56] 2026-03-19 00:01:23,906 | INFO     | 
[2026-03-19 01:01:56] 2026-03-19 00:01:23,907 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-19 01:01:56] 2026-03-19 00:01:23,930 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,930 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,930 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,930 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,931 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 01:01:56] 2026-03-19 00:01:23,932 | INFO     | job 7056958741 has completed (purged errors)
[2026-03-19 01:01:56] 2026-03-19 00:01:23,932 | INFO     | overall cleanup function is called
[2026-03-19 01:01:56] 2026-03-19 00:01:24,939 | INFO     | --- collectZombieJob: --- 10, [3650800]
[2026-03-19 01:01:56] 2026-03-19 00:01:24,940 | INFO     | zombie collector waiting for pid 3650800
[2026-03-19 01:01:56] 2026-03-19 00:01:24,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 01:01:56] 2026-03-19 00:01:24,940 | INFO     | collected zombie processes
[2026-03-19 01:01:56] 2026-03-19 00:01:24,940 | INFO     | will attempt to kill all subprocesses of pid=3650800
[2026-03-19 01:01:56] 2026-03-19 00:01:25,346 | INFO     | process IDs to be killed: [3650800] (in reverse order)
[2026-03-19 01:01:56] 2026-03-19 00:01:25,480 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 01:01:56] 2026-03-19 00:01:25,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 01:01:56] 2026-03-19 00:01:25,493 | INFO     | did not find any defunct processes belonging to 3650800
[2026-03-19 01:01:56] 2026-03-19 00:01:25,505 | INFO     | did not find any defunct processes belonging to 3650800
[2026-03-19 01:01:56] 2026-03-19 00:01:25,505 | INFO     | ready for new job
[2026-03-19 01:01:56] 2026-03-19 00:01:25,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 01:01:56] 2026-03-19 00:01:25,509 | INFO     | **************************************
[2026-03-19 01:01:56] 2026-03-19 00:01:25,509 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 01:01:56] 2026-03-19 00:01:25,509 | INFO     | **************************************
[2026-03-19 01:01:56] 2026-03-19 00:01:25,509 | INFO     | 
[2026-03-19 01:01:56] 2026-03-19 00:01:25,513 | INFO     | architecture information:
[2026-03-19 01:01:56] 2026-03-19 00:01:25,513 | INFO     | executing command: cat /etc/os-release
[2026-03-19 01:01:56] 2026-03-19 00:01:25,530 | INFO     | cat /etc/os-release:
[2026-03-19 01:01:56] NAME="CentOS Linux"
[2026-03-19 01:01:56] VERSION="7 (Core)"
[2026-03-19 01:01:56] ID="centos"
[2026-03-19 01:01:56] ID_LIKE="rhel fedora"
[2026-03-19 01:01:56] VERSION_ID="7"
[2026-03-19 01:01:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 01:01:56] ANSI_COLOR="0;31"
[2026-03-19 01:01:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 01:01:56] HOME_URL="https://www.centos.org/"
[2026-03-19 01:01:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 01:01:56] 
[2026-03-19 01:01:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 01:01:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 01:01:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 01:01:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 01:01:56] 
[2026-03-19 01:01:56] 2026-03-19 00:01:25,531 | INFO     | **************************************
[2026-03-19 01:01:56] 2026-03-19 00:01:26,034 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-19 01:01:56] 2026-03-19 00:01:26,052 | INFO     | sufficient remaining disk space (9953083392 B)
[2026-03-19 01:01:56] 2026-03-19 00:01:26,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 01:01:56] 2026-03-19 00:01:26,052 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 01:01:56] 2026-03-19 00:01:26,053 | INFO     | update_server=False
[2026-03-19 01:01:56] 2026-03-19 00:01:26,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 01:01:56] 2026-03-19 00:01:26,070 | INFO     | all data control threads have been joined
[2026-03-19 01:01:56] 2026-03-19 00:01:26,799 | WARNING  | process 3650800 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 01:01:56] 2026-03-19 00:01:27,029 | INFO     | all payload control threads have been joined
[2026-03-19 01:01:56] 2026-03-19 00:01:27,057 | INFO     | [job] retrieve thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:27,076 | INFO     | [data] control thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:27,098 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 01:01:56] 2026-03-19 00:01:27,174 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:27,411 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:27,524 | INFO     | number of running child processes to parent process 3650800: 1
[2026-03-19 01:01:56] 2026-03-19 00:01:27,524 | INFO     | maximum number of monitored processes: 6
[2026-03-19 01:01:56] 2026-03-19 00:01:27,525 | INFO     | aborting job monitoring since job object (job id=7056958741) has expired
[2026-03-19 01:01:56] 2026-03-19 00:01:27,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:01:56] 2026-03-19 00:01:27,525 | INFO     | will abort loop
[2026-03-19 01:01:56] 2026-03-19 00:01:27,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 01:01:56] 2026-03-19 00:01:27,550 | INFO     | [job] validate thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:27,703 | INFO     | all job control threads have been joined
[2026-03-19 01:01:56] 2026-03-19 00:01:27,718 | INFO     | [payload] validate_post thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,034 | INFO     | [payload] control thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,057 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,181 | INFO     | [data] copytool_in thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,193 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,196 | INFO     | [payload] failed_post thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 01:01:56] 2026-03-19 00:01:28,530 | INFO     | [job] job monitor thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,708 | INFO     | [job] control thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:28,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:01:56] 2026-03-19 00:01:29,555 | INFO     | [data] copytool_out thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:29,848 | INFO     | [job] queue monitor thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:31,078 | INFO     | [monitor] cgroup control has ended
[2026-03-19 01:01:56] 2026-03-19 00:01:32,242 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 01:01:56] 2026-03-19 00:01:33,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22892350347072)>', '<ExcThread(monitor, started 22892041467648)>']
[2026-03-19 01:01:56] 2026-03-19 00:01:38,118 | INFO     | all workflow threads have been joined
[2026-03-19 01:01:56] 2026-03-19 00:01:38,119 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 01:01:56] 2026-03-19 00:01:38,119 | INFO     | traces error code: 0
[2026-03-19 01:01:56] 2026-03-19 00:01:38,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 01:01:56] 2026-03-19 00:01:56,256 | INFO     | PID=3643473 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 01:01:56] 2026-03-19 00:01:56,256 | INFO     | .. there are 12 such processes running
[2026-03-19 01:01:56] 2026-03-19 00:01:56,257 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 01:01:56] 2026-03-19 00:01:56,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 01:01:56] 2026-03-19 00:01:56,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 01:01:56] 2026-03-19 00:01:56,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 01:01:56] 2026-03-19 00:01:56,258 | INFO     | [monitor] control thread has ended
[2026-03-19 01:01:56] 2026-03-19 00:01:56,391 [wrapper] ==== pilot stdout END ====
[2026-03-19 01:01:56] 2026-03-19 00:01:56,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 01:01:56] 2026-03-19 00:01:56,396 [wrapper] pilotpid: 3643473
[2026-03-19 01:01:56] 2026-03-19 00:01:56,399 [wrapper] Pilot exit status: 0
[2026-03-19 01:01:56] 2026-03-19 00:01:56,410 [wrapper] pandaids: 7056958741 7056958741
[2026-03-19 01:01:56] 2026-03-19 00:01:56,489 [wrapper] cleanup supervisor_pilot 4067072 3643475
[2026-03-19 01:01:56] 2026-03-19 00:01:56,492 [wrapper] Test setup, not cleaning
[2026-03-19 01:01:56] 2026-03-19 00:01:56,495 [wrapper] apfmon messages muted
[2026-03-19 01:01:56] 2026-03-19 00:01:56,498 [wrapper] ==== wrapper stdout END ====
[2026-03-19 01:01:56] 2026-03-19 00:01:56,501 [wrapper] ==== wrapper stderr END ====
[2026-03-19 01:01:56]  *** Error codes and diagnostics ***
[2026-03-19 01:01:56]     "exeErrorCode": 0,
[2026-03-19 01:01:56]     "exeErrorDiag": "",
[2026-03-19 01:01:56]     "pilotErrorCode": 0,
[2026-03-19 01:01:56]     "pilotErrorDiag": "",
[2026-03-19 01:01:56]  *** Listing of results directory ***
[2026-03-19 01:01:56] total 701540
[2026-03-19 01:01:56] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-19 01:01:56] -rwx------. 1 boinc boinc     36322 Mar 16 16:26 runpilot2-wrapper.sh
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:28 queuedata.json
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:28 pilot3.tar.gz
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc       100 Mar 18 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 01:01:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 14:12 run_atlas
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc       105 Mar 18 14:12 job.xml
[2026-03-19 01:01:56] -rw-r--r--. 3 boinc boinc 236792157 Mar 18 14:12 EVNT.49132028._000002.pool.root.1
[2026-03-19 01:01:56] -rw-r--r--. 3 boinc boinc 236792157 Mar 18 14:12 ATLAS.root_0
[2026-03-19 01:01:56] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:12 start_atlas.sh
[2026-03-19 01:01:56] drwxrwx--x. 2 boinc boinc      4096 Mar 18 14:12 shared
[2026-03-19 01:01:56] -rw-r--r--. 2 boinc boinc    597543 Mar 18 14:12 input.tar.gz
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc         0 Mar 18 14:12 boinc_lockfile
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc      2628 Mar 18 17:42 pandaJob.out
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc   1011280 Mar 18 17:42 agis_schedconf.cvmfs.json
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc       451 Mar 18 17:42 workernode_map.json
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc      6571 Mar 18 20:13 init_data.xml
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc       530 Mar 19 01:00 boinc_task_state.xml
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc 232430292 Mar 19 01:00 HITS.49179692._000033.pool.root.1
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc      1041 Mar 19 01:01 memory_monitor_summary.json
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc   1511579 Mar 19 01:01 agis_ddmendpoints.agis.ALL.json
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc    560118 Mar 19 01:01 log.49179692._000033.job.log.tgz.1
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc      6381 Mar 19 01:01 heartbeat.json
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc      8192 Mar 19 01:01 boinc_mmap_file
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc        28 Mar 19 01:01 wrapper_checkpoint.txt
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc        96 Mar 19 01:01 pilot_heartbeat.json
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc       823 Mar 19 01:01 pilotlog.txt
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc   3648762 Mar 19 01:01 log.49179692._000033.job.log.1
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc       357 Mar 19 01:01 output.list
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc       620 Mar 19 01:01 runtime_log
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc   4229120 Mar 19 01:01 result.tar.gz
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc      9282 Mar 19 01:01 runtime_log.err
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc       791 Mar 19 01:01 4HBLDmN1OM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7suLDmrVxKBo.diag
[2026-03-19 01:01:56] -rw-r--r--. 1 boinc boinc     22788 Mar 19 01:01 stderr.txt
[2026-03-19 01:01:56] HITS file was successfully produced:
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc 232430292 Mar 19 01:00 shared/HITS.pool.root.1
[2026-03-19 01:01:56]  *** Contents of shared directory: ***
[2026-03-19 01:01:56] total 462968
[2026-03-19 01:01:56] -rw-r--r--. 3 boinc boinc 236792157 Mar 18 14:12 ATLAS.root_0
[2026-03-19 01:01:56] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:12 start_atlas.sh
[2026-03-19 01:01:56] -rw-r--r--. 2 boinc boinc    597543 Mar 18 14:12 input.tar.gz
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc 232430292 Mar 19 01:00 HITS.pool.root.1
[2026-03-19 01:01:56] -rw-------. 1 boinc boinc   4229120 Mar 19 01:01 result.tar.gz
01:01:58 (3637689): run_atlas exited; CPU time 94769.252137
01:01:58 (3637689): called boinc_finish(0)

</stderr_txt>
]]>

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