Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:25:08 (3355166): wrapper (7.7.26015): starting
05:25:08 (3355166): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 05:25:08] Arguments: --nthreads 4
[2026-03-19 05:25:08] Threads: 4
[2026-03-19 05:25:08] Checking for CVMFS
[2026-03-19 05:25:08] No cvmfs_config command found, will try listing directly
[2026-03-19 05:25:08] CVMFS is ok
[2026-03-19 05:25:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 05:25:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 05:25:08] Further information can be found at the LHC@home message board.
[2026-03-19 05:25:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 05:25:08] Checking for apptainer binary...
[2026-03-19 05:25:08] which: no apptainer in ((null))
[2026-03-19 05:25:08] apptainer is not installed, using version from CVMFS
[2026-03-19 05:25:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 05:25:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-19 05:25:09] apptainer works
[2026-03-19 05:25:09] Set ATHENA_PROC_NUMBER=4
[2026-03-19 05:25:09] Set ATHENA_CORE_NUMBER=4
[2026-03-19 05:25:09] Starting ATLAS job with PandaID=7056951636
[2026-03-19 05:25:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 08:45:26]  *** The last 200 lines of the pilot log: ***
[2026-03-19 08:45:26] 2026-03-19 07:42:40,767 | INFO     | preparing for final server update for job 7056951636 in state='finished'
[2026-03-19 08:45:26] 2026-03-19 07:42:40,768 | INFO     | reading metadata from: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7056951636/jobReport.json
[2026-03-19 08:45:26] 2026-03-19 07:42:40,769 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot224/slots/0/workernode_map.json
[2026-03-19 08:45:26] 2026-03-19 07:42:40,769 | INFO     | this job has now completed (state=finished)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,769 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,769 | INFO     | log transfer has been attempted: DONE
[2026-03-19 08:45:26] 2026-03-19 07:42:40,769 | INFO     | job 7056951636 has finished - writing final server update
[2026-03-19 08:45:26] 2026-03-19 07:42:40,770 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_783786/.job.ad'
[2026-03-19 08:45:26] 2026-03-19 07:42:40,770 | INFO     | total number of processed events: 400 (read)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,787 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7056951636/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,788 | INFO     | extracted standard info from prmon json
[2026-03-19 08:45:26] 2026-03-19 07:42:40,788 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 08:45:26] 2026-03-19 07:42:40,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 08:45:26] 2026-03-19 07:42:40,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 08:45:26] 2026-03-19 07:42:40,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 08:45:26] 2026-03-19 07:42:40,791 | INFO     | fitting pss+swap vs Time
[2026-03-19 08:45:26] 2026-03-19 07:42:40,791 | INFO     | sum of square deviations: 2263977332.5
[2026-03-19 08:45:26] 2026-03-19 07:42:40,791 | INFO     | sum of deviations: 12532226496.000008
[2026-03-19 08:45:26] 2026-03-19 07:42:40,792 | INFO     | mean x: 1773900232.5
[2026-03-19 08:45:26] 2026-03-19 07:42:40,792 | INFO     | mean y: 2336121.907216495
[2026-03-19 08:45:26] 2026-03-19 07:42:40,792 | INFO     | intersect: -9817072922.461859
[2026-03-19 08:45:26] 2026-03-19 07:42:40,792 | INFO     | chi2: 1.094631993316873
[2026-03-19 08:45:26] 2026-03-19 07:42:40,792 | INFO     | sum of square deviations: 2093397390.0
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | sum of deviations: 12225651781.000006
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | mean x: 1773900080.0
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | mean y: 2335848.3333333335
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | intersect: -10357419435.572916
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | chi2: 1.095230703242451
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | current chi2=1.095230703242451 (change=-0.054695087411415 %)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | right removable region: 188
[2026-03-19 08:45:26] 2026-03-19 07:42:40,793 | INFO     | sum of square deviations: 2093397390.0
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | sum of deviations: -6693931502.000001
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | mean x: 1773900385.0
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | mean y: 2353047.306878307
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | intersect: 5674648104.750047
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | chi2: 0.004718152134960441
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | current chi2=0.004718152134960441 (change=99.56897366751872 %)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | sum of square deviations: 1931608310.0
[2026-03-19 08:45:26] 2026-03-19 07:42:40,794 | INFO     | sum of deviations: -5959684536.499999
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | mean x: 1773900537.5
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | mean y: 2352353.0489130435
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | intersect: 5475453471.892094
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | chi2: 0.004609630000401506
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | current chi2=0.004609630000401506 (change=2.300098247252573 %)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | left removable region: 20
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | sum of square deviations: 1470248962.0
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | sum of deviations: -3490683947.0000005
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | mean x: 1773900659.5
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | mean y: 2350073.1785714286
[2026-03-19 08:45:26] 2026-03-19 07:42:40,795 | INFO     | intersect: 4213967775.8471913
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | chi2: 0.002978044800421415
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | current memory leak: -2.37 B/s (using 168 data points, chi2=0.00)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | could have reported an average CPU frequency of 3583 MHz (10 samples)
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | ..............................
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . Timing measurements:
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . get job = 0 s
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . initial setup = 5 s
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . payload setup = 7 s
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . stage-in = 0 s
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . payload execution = 11811 s
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . stage-out = 0 s
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | . log creation = 0 s
[2026-03-19 08:45:26] 2026-03-19 07:42:40,796 | INFO     | ..............................
[2026-03-19 08:45:26] 2026-03-19 07:42:40,884 | INFO     | time since job start (11837s) is within the limit (345600.0s)
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | 
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | job summary report
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | --------------------------------------------------
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | PanDA job id: 7056951636
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | task id: 49179398
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | errors: (none)
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | pilot state: finished 
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | transexitcode: 0
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | exeerrorcode: 0
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | exeerrordiag: 
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | exitcode: 0
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | exitmsg: OK
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | cpuconsumptiontime: 45430 s
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | nevents: 400
[2026-03-19 08:45:26] 2026-03-19 07:42:41,242 | INFO     | neventsw: 0
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | pid: 3380801
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | pgrp: 3380801
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | corecount: 4
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | event service: False
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | sizes: {0: 2280312, 11: 2280312, 11822: 2309973, 11823: 2309972, 11824: 2319050, 11826: 2319106, 11827: 2319428}
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | --------------------------------------------------
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | 
[2026-03-19 08:45:26] 2026-03-19 07:42:41,243 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-19 08:45:26] 2026-03-19 07:42:41,261 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,261 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,261 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,261 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | job 7056951636 has completed (purged errors)
[2026-03-19 08:45:26] 2026-03-19 07:42:41,262 | INFO     | overall cleanup function is called
[2026-03-19 08:45:26] 2026-03-19 07:42:42,269 | INFO     | --- collectZombieJob: --- 10, [3380801]
[2026-03-19 08:45:26] 2026-03-19 07:42:42,269 | INFO     | zombie collector waiting for pid 3380801
[2026-03-19 08:45:26] 2026-03-19 07:42:42,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 08:45:26] 2026-03-19 07:42:42,269 | INFO     | collected zombie processes
[2026-03-19 08:45:26] 2026-03-19 07:42:42,269 | INFO     | will attempt to kill all subprocesses of pid=3380801
[2026-03-19 08:45:26] 2026-03-19 07:42:42,777 | INFO     | process IDs to be killed: [3380801] (in reverse order)
[2026-03-19 08:45:26] 2026-03-19 07:42:43,005 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 08:45:26] 2026-03-19 07:42:43,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 08:45:26] 2026-03-19 07:42:43,038 | INFO     | did not find any defunct processes belonging to 3380801
[2026-03-19 08:45:26] 2026-03-19 07:42:43,072 | INFO     | did not find any defunct processes belonging to 3380801
[2026-03-19 08:45:26] 2026-03-19 07:42:43,072 | INFO     | ready for new job
[2026-03-19 08:45:26] 2026-03-19 07:42:43,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 08:45:26] 2026-03-19 07:42:43,074 | INFO     | **************************************
[2026-03-19 08:45:26] 2026-03-19 07:42:43,074 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 08:45:26] 2026-03-19 07:42:43,074 | INFO     | **************************************
[2026-03-19 08:45:26] 2026-03-19 07:42:43,074 | INFO     | 
[2026-03-19 08:45:26] 2026-03-19 07:42:43,079 | INFO     | architecture information:
[2026-03-19 08:45:26] 2026-03-19 07:42:43,079 | INFO     | executing command: cat /etc/os-release
[2026-03-19 08:45:26] 2026-03-19 07:42:43,094 | INFO     | cat /etc/os-release:
[2026-03-19 08:45:26] NAME="CentOS Linux"
[2026-03-19 08:45:26] VERSION="7 (Core)"
[2026-03-19 08:45:26] ID="centos"
[2026-03-19 08:45:26] ID_LIKE="rhel fedora"
[2026-03-19 08:45:26] VERSION_ID="7"
[2026-03-19 08:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 08:45:26] ANSI_COLOR="0;31"
[2026-03-19 08:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 08:45:26] HOME_URL="https://www.centos.org/"
[2026-03-19 08:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 08:45:26] 
[2026-03-19 08:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 08:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 08:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 08:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 08:45:26] 
[2026-03-19 08:45:26] 2026-03-19 07:42:43,094 | INFO     | **************************************
[2026-03-19 08:45:26] 2026-03-19 07:42:43,597 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-19 08:45:26] 2026-03-19 07:42:43,610 | INFO     | sufficient remaining disk space (37976276992 B)
[2026-03-19 08:45:26] 2026-03-19 07:42:43,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 08:45:26] 2026-03-19 07:42:43,611 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 08:45:26] 2026-03-19 07:42:43,611 | INFO     | update_server=False
[2026-03-19 08:45:26] 2026-03-19 07:42:43,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 08:45:26] 2026-03-19 07:42:43,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:45:26] 2026-03-19 07:42:43,611 | INFO     | aborting loop
[2026-03-19 08:45:26] 2026-03-19 07:42:43,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 08:45:26] 2026-03-19 07:42:43,766 | INFO     | all payload control threads have been joined
[2026-03-19 08:45:26] 2026-03-19 07:42:44,160 | INFO     | all data control threads have been joined
[2026-03-19 08:45:26] 2026-03-19 07:42:44,616 | INFO     | [job] retrieve thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:44,617 | INFO     | [job] job monitor thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:44,633 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:44,771 | INFO     | [payload] control thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,037 | INFO     | [data] copytool_in thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,091 | INFO     | all job control threads have been joined
[2026-03-19 08:45:26] 2026-03-19 07:42:45,128 | INFO     | [job] validate thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,165 | INFO     | [data] control thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,268 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,644 | INFO     | [payload] failed_post thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,714 | INFO     | [data] copytool_out thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,749 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:45,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:45:26] 2026-03-19 07:42:45,951 | INFO     | [payload] validate_post thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:46,096 | INFO     | [job] control thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:46,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 08:45:26] 2026-03-19 07:42:46,857 | INFO     | [job] queue monitor thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:50,778 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:42:54,305 | INFO     | job.realtimelogging is not enabled
[2026-03-19 08:45:26] 2026-03-19 07:42:55,310 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 08:45:26] 2026-03-19 07:43:14,554 | INFO     | PID=3360064 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 08:45:26] 2026-03-19 07:43:14,554 | INFO     | .. there are 35 such processes running
[2026-03-19 08:45:26] 2026-03-19 07:43:14,555 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 08:45:26] 2026-03-19 07:43:14,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 08:45:26] 2026-03-19 07:43:14,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 08:45:26] 2026-03-19 07:43:42,410 | INFO     | [monitor] cgroup control has ended
[2026-03-19 08:45:26] 2026-03-19 07:43:42,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22734596872000)>', '<ExcThread(monitor, started 22734349530880)>']
[2026-03-19 08:45:26] 2026-03-19 07:43:42,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 08:45:26] 2026-03-19 07:43:42,697 | INFO     | [monitor] control thread has ended
[2026-03-19 08:45:26] 2026-03-19 07:43:47,661 | INFO     | all workflow threads have been joined
[2026-03-19 08:45:26] 2026-03-19 07:43:47,661 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 08:45:26] 2026-03-19 07:43:47,661 | INFO     | traces error code: 0
[2026-03-19 08:45:26] 2026-03-19 07:43:47,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 08:45:26] 2026-03-19 07:43:47,893 [wrapper] ==== pilot stdout END ====
[2026-03-19 08:45:26] 2026-03-19 07:43:47,895 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 08:45:26] 2026-03-19 07:43:47,897 [wrapper] pilotpid: 3360064
[2026-03-19 08:45:26] 2026-03-19 07:43:47,900 [wrapper] Pilot exit status: 0
[2026-03-19 08:45:26] 2026-03-19 07:43:47,910 [wrapper] pandaids: 7056951636
[2026-03-19 08:45:26] 2026-03-19 07:43:48,059 [wrapper] cleanup supervisor_pilot 4137813 3360065
[2026-03-19 08:45:26] 2026-03-19 07:43:48,062 [wrapper] Test setup, not cleaning
[2026-03-19 08:45:26] 2026-03-19 07:43:48,064 [wrapper] apfmon messages muted
[2026-03-19 08:45:26] 2026-03-19 07:43:48,067 [wrapper] ==== wrapper stdout END ====
[2026-03-19 08:45:26] 2026-03-19 07:43:48,070 [wrapper] ==== wrapper stderr END ====
[2026-03-19 08:45:26]  *** Error codes and diagnostics ***
[2026-03-19 08:45:26]     "exeErrorCode": 0,
[2026-03-19 08:45:26]     "exeErrorDiag": "",
[2026-03-19 08:45:26]     "pilotErrorCode": 0,
[2026-03-19 08:45:26]     "pilotErrorDiag": "",
[2026-03-19 08:45:26]  *** Listing of results directory ***
[2026-03-19 08:45:26] total 483308
[2026-03-19 08:45:26] -rwx------. 1 boinc boinc     36322 Mar 16 16:26 runpilot2-wrapper.sh
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:28 queuedata.json
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:28 pilot3.tar.gz
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc       100 Mar 19 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 08:45:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 05:25 run_atlas
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc       105 Mar 19 05:25 job.xml
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc      6708 Mar 19 05:25 init_data.xml
[2026-03-19 08:45:26] -rw-r--r--. 2 boinc boinc 244364830 Mar 19 05:25 EVNT.49131349._000007.pool.root.1
[2026-03-19 08:45:26] -rw-r--r--. 2 boinc boinc     15845 Mar 19 05:25 start_atlas.sh
[2026-03-19 08:45:26] drwxrwx--x. 2 boinc boinc      4096 Mar 19 05:25 shared
[2026-03-19 08:45:26] -rw-r--r--. 2 boinc boinc    597539 Mar 19 05:25 input.tar.gz
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc         0 Mar 19 05:25 boinc_lockfile
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc      2611 Mar 19 05:25 pandaJob.out
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc   1010817 Mar 19 05:25 agis_schedconf.cvmfs.json
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc       445 Mar 19 05:25 workernode_map.json
[2026-03-19 08:45:26] drwx------. 5 boinc boinc      4096 Mar 19 05:25 pilot3
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc 242558139 Mar 19 08:42 HITS.49179398._000158.pool.root.1
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc      1031 Mar 19 08:42 memory_monitor_summary.json
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc   1511579 Mar 19 08:42 agis_ddmendpoints.agis.ALL.json
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc    363866 Mar 19 08:42 log.49179398._000158.job.log.tgz.1
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc       528 Mar 19 08:42 boinc_task_state.xml
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc      6352 Mar 19 08:42 heartbeat.json
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc        95 Mar 19 08:43 pilot_heartbeat.json
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc      4902 Mar 19 08:43 pilotlog.txt
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc   1658814 Mar 19 08:43 log.49179398._000158.job.log.1
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc       357 Mar 19 08:43 output.list
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc       620 Mar 19 08:43 runtime_log
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc   2037760 Mar 19 08:43 result.tar.gz
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc      9222 Mar 19 08:43 runtime_log.err
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc       665 Mar 19 08:43 95zMDmn0OM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmepuLDmrfXw1n.diag
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc        26 Mar 19 08:45 wrapper_checkpoint.txt
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc      8192 Mar 19 08:45 boinc_mmap_file
[2026-03-19 08:45:26] -rw-r--r--. 1 boinc boinc     21159 Mar 19 08:45 stderr.txt
[2026-03-19 08:45:26] HITS file was successfully produced:
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc 242558139 Mar 19 08:42 shared/HITS.pool.root.1
[2026-03-19 08:45:26]  *** Contents of shared directory: ***
[2026-03-19 08:45:26] total 478116
[2026-03-19 08:45:26] -rw-r--r--. 2 boinc boinc 244364830 Mar 19 05:25 ATLAS.root_0
[2026-03-19 08:45:26] -rw-r--r--. 2 boinc boinc     15845 Mar 19 05:25 start_atlas.sh
[2026-03-19 08:45:26] -rw-r--r--. 2 boinc boinc    597539 Mar 19 05:25 input.tar.gz
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc 242558139 Mar 19 08:42 HITS.pool.root.1
[2026-03-19 08:45:26] -rw-------. 1 boinc boinc   2037760 Mar 19 08:43 result.tar.gz
08:45:28 (3355166): run_atlas exited; CPU time 46032.122747
08:45:28 (3355166): called boinc_finish(0)

</stderr_txt>
]]>

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