Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:39:57 (3606699): wrapper (7.7.26015): starting
02:39:57 (3606699): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 02:39:57] Arguments: --nthreads 4
[2026-03-19 02:39:57] Threads: 4
[2026-03-19 02:39:57] Checking for CVMFS
[2026-03-19 02:39:57] No cvmfs_config command found, will try listing directly
[2026-03-19 02:39:57] CVMFS is ok
[2026-03-19 02:39:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:39:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:39:57] Further information can be found at the LHC@home message board.
[2026-03-19 02:39:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:39:57] Checking for apptainer binary...
[2026-03-19 02:39:57] which: no apptainer in ((null))
[2026-03-19 02:39:57] apptainer is not installed, using version from CVMFS
[2026-03-19 02:39:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:39:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-19 02:39:58] apptainer works
[2026-03-19 02:39:58] Set ATHENA_PROC_NUMBER=4
[2026-03-19 02:39:58] Set ATHENA_CORE_NUMBER=4
[2026-03-19 02:39:58] Starting ATLAS job with PandaID=7056958702
[2026-03-19 02:39:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 05:31:39]  *** The last 200 lines of the pilot log: ***
[2026-03-19 05:31:39] 2026-03-19 04:29:30,242 | INFO     | job 7056958702 has finished - writing final server update
[2026-03-19 05:31:39] 2026-03-19 04:29:30,242 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_663318/.job.ad'
[2026-03-19 05:31:39] 2026-03-19 04:29:30,242 | INFO     | total number of processed events: 400 (read)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,273 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7056958702/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,273 | INFO     | extracted standard info from prmon json
[2026-03-19 05:31:39] 2026-03-19 04:29:30,273 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 05:31:39] 2026-03-19 04:29:30,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 05:31:39] 2026-03-19 04:29:30,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 05:31:39] 2026-03-19 04:29:30,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 05:31:39] 2026-03-19 04:29:30,275 | INFO     | fitting pss+swap vs Time
[2026-03-19 05:31:39] 2026-03-19 04:29:30,276 | INFO     | sum of square deviations: 1444149868.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,276 | INFO     | sum of deviations: 8635593588.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,276 | INFO     | mean x: 1773889496.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,276 | INFO     | mean y: 2311643.3413173654
[2026-03-19 05:31:39] 2026-03-19 04:29:30,276 | INFO     | intersect: -10605028423.581812
[2026-03-19 05:31:39] 2026-03-19 04:29:30,276 | INFO     | chi2: 1.7642486342838115
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | sum of square deviations: 1318277740.5
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | sum of deviations: 17703443302.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | mean x: 1773889343.5
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | mean y: 2322347.75308642
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | intersect: -23819629925.19
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | chi2: 1.0976435005261969
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | current chi2=1.0976435005261969 (change=37.78408104185496 %)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,277 | INFO     | sum of square deviations: 1199940638.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | sum of deviations: 17014016422.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | mean x: 1773889191.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | mean y: 2321459.050955414
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | intersect: -25149739293.542953
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | chi2: 1.0984372749700573
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | current chi2=1.0984372749700573 (change=-0.07231623413976322 %)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | right removable region: 156
[2026-03-19 05:31:39] 2026-03-19 04:29:30,278 | INFO     | sum of square deviations: 1318277740.5
[2026-03-19 05:31:39] 2026-03-19 04:29:30,279 | INFO     | sum of deviations: -7385381111.5
[2026-03-19 05:31:39] 2026-03-19 04:29:30,279 | INFO     | mean x: 1773889648.5
[2026-03-19 05:31:39] 2026-03-19 04:29:30,279 | INFO     | mean y: 2330678.8950617285
[2026-03-19 05:31:39] 2026-03-19 04:29:30,279 | INFO     | intersect: 9940184214.181448
[2026-03-19 05:31:39] 2026-03-19 04:29:30,279 | INFO     | chi2: 0.6840042362908609
[2026-03-19 05:31:39] 2026-03-19 04:29:30,279 | INFO     | current chi2=0.6840042362908609 (change=61.229714281823476 %)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,279 | INFO     | sum of square deviations: 1199940638.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | sum of deviations: -7761823976.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | mean x: 1773889801.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | mean y: 2331161.611464968
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | intersect: 11476749105.429506
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | chi2: 0.6837606176316358
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | current chi2=0.6837606176316358 (change=0.035616542456848296 %)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | left removable region: 20
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | sum of square deviations: 779958810.0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | sum of deviations: 1064344927.5000001
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | mean x: 1773889770.5
[2026-03-19 05:31:39] 2026-03-19 04:29:30,280 | INFO     | mean y: 2342890.419117647
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | intersect: -2418336964.6822233
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | chi2: 0.000508436755923078
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | current memory leak: 1.36 B/s (using 136 data points, chi2=0.00)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | could have reported an average CPU frequency of 3585 MHz (9 samples)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | ..............................
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . Timing measurements:
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . get job = 0 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . initial setup = 4 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . payload setup = 7 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . stage-in = 0 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . payload execution = 10134 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . stage-out = 0 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | . log creation = 0 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,281 | INFO     | ..............................
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | 
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | job summary report
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | --------------------------------------------------
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | PanDA job id: 7056958702
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | task id: 49179724
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | errors: (none)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | pilot state: finished 
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | transexitcode: 0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | exeerrorcode: 0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | exeerrordiag: 
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | exitcode: 0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | exitmsg: OK
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | cpuconsumptiontime: 39092 s
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | nevents: 400
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | neventsw: 0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | pid: 3617441
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | pgrp: 3617441
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | corecount: 4
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | event service: False
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | sizes: {0: 2279247, 1: 2280377, 11: 2280377, 10145: 2309120, 10147: 2318142, 10148: 2318198, 10149: 2318584}
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | --------------------------------------------------
[2026-03-19 05:31:39] 2026-03-19 04:29:30,332 | INFO     | 
[2026-03-19 05:31:39] 2026-03-19 04:29:30,333 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 05:31:39] 2026-03-19 04:29:30,353 | INFO     | job 7056958702 has completed (purged errors)
[2026-03-19 05:31:39] 2026-03-19 04:29:30,353 | INFO     | overall cleanup function is called
[2026-03-19 05:31:39] 2026-03-19 04:29:31,362 | INFO     | --- collectZombieJob: --- 10, [3617441]
[2026-03-19 05:31:39] 2026-03-19 04:29:31,362 | INFO     | zombie collector waiting for pid 3617441
[2026-03-19 05:31:39] 2026-03-19 04:29:31,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 05:31:39] 2026-03-19 04:29:31,362 | INFO     | collected zombie processes
[2026-03-19 05:31:39] 2026-03-19 04:29:31,362 | INFO     | will attempt to kill all subprocesses of pid=3617441
[2026-03-19 05:31:39] 2026-03-19 04:29:31,877 | INFO     | process IDs to be killed: [3617441] (in reverse order)
[2026-03-19 05:31:39] 2026-03-19 04:29:32,145 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 05:31:39] 2026-03-19 04:29:32,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 05:31:39] 2026-03-19 04:29:32,177 | INFO     | did not find any defunct processes belonging to 3617441
[2026-03-19 05:31:39] 2026-03-19 04:29:32,206 | INFO     | did not find any defunct processes belonging to 3617441
[2026-03-19 05:31:39] 2026-03-19 04:29:32,207 | INFO     | ready for new job
[2026-03-19 05:31:39] 2026-03-19 04:29:32,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 05:31:39] 2026-03-19 04:29:32,208 | INFO     | **************************************
[2026-03-19 05:31:39] 2026-03-19 04:29:32,208 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 05:31:39] 2026-03-19 04:29:32,208 | INFO     | **************************************
[2026-03-19 05:31:39] 2026-03-19 04:29:32,208 | INFO     | 
[2026-03-19 05:31:39] 2026-03-19 04:29:32,214 | INFO     | architecture information:
[2026-03-19 05:31:39] 2026-03-19 04:29:32,214 | INFO     | executing command: cat /etc/os-release
[2026-03-19 05:31:39] 2026-03-19 04:29:32,227 | INFO     | cat /etc/os-release:
[2026-03-19 05:31:39] NAME="CentOS Linux"
[2026-03-19 05:31:39] VERSION="7 (Core)"
[2026-03-19 05:31:39] ID="centos"
[2026-03-19 05:31:39] ID_LIKE="rhel fedora"
[2026-03-19 05:31:39] VERSION_ID="7"
[2026-03-19 05:31:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 05:31:39] ANSI_COLOR="0;31"
[2026-03-19 05:31:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 05:31:39] HOME_URL="https://www.centos.org/"
[2026-03-19 05:31:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 05:31:39] 
[2026-03-19 05:31:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 05:31:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 05:31:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 05:31:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 05:31:39] 
[2026-03-19 05:31:39] 2026-03-19 04:29:32,228 | INFO     | **************************************
[2026-03-19 05:31:39] 2026-03-19 04:29:32,733 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-19 05:31:39] 2026-03-19 04:29:32,748 | INFO     | sufficient remaining disk space (40146829312 B)
[2026-03-19 05:31:39] 2026-03-19 04:29:32,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 05:31:39] 2026-03-19 04:29:32,748 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 05:31:39] 2026-03-19 04:29:32,748 | INFO     | update_server=False
[2026-03-19 05:31:39] 2026-03-19 04:29:32,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 05:31:39] 2026-03-19 04:29:32,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 05:31:39] 2026-03-19 04:29:32,748 | INFO     | aborting loop
[2026-03-19 05:31:39] 2026-03-19 04:29:32,853 | INFO     | all data control threads have been joined
[2026-03-19 05:31:39] 2026-03-19 04:29:33,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 05:31:39] 2026-03-19 04:29:33,754 | INFO     | [job] job monitor thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:33,754 | INFO     | [job] retrieve thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:33,771 | INFO     | all job control threads have been joined
[2026-03-19 05:31:39] 2026-03-19 04:29:33,793 | INFO     | [payload] failed_post thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:33,859 | INFO     | [data] control thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:33,875 | INFO     | all payload control threads have been joined
[2026-03-19 05:31:39] 2026-03-19 04:29:33,919 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:34,035 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:34,098 | INFO     | [payload] validate_post thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:34,396 | INFO     | [data] copytool_in thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:34,776 | INFO     | [job] control thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:34,881 | INFO     | [payload] control thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:35,118 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:35,245 | INFO     | [job] validate thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:35,345 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 05:31:39] 2026-03-19 04:29:35,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 05:31:39] 2026-03-19 04:29:35,597 | INFO     | [data] copytool_out thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:36,350 | INFO     | [job] queue monitor thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:39,584 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:29:43,191 | INFO     | job.realtimelogging is not enabled
[2026-03-19 05:31:39] 2026-03-19 04:29:44,197 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 05:31:39] 2026-03-19 04:30:03,276 | INFO     | PID=3611504 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 05:31:39] 2026-03-19 04:30:03,277 | INFO     | .. there are 42 such processes running
[2026-03-19 05:31:39] 2026-03-19 04:30:03,277 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 05:31:39] 2026-03-19 04:30:03,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 05:31:39] 2026-03-19 04:30:03,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 05:31:39] 2026-03-19 04:30:27,152 | INFO     | [monitor] cgroup control has ended
[2026-03-19 05:31:39] 2026-03-19 04:30:28,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23361137637184)>', '<ExcThread(monitor, started 23360894670592)>']
[2026-03-19 05:31:39] 2026-03-19 04:30:28,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 05:31:39] 2026-03-19 04:30:28,414 | INFO     | [monitor] control thread has ended
[2026-03-19 05:31:39] 2026-03-19 04:30:33,400 | INFO     | all workflow threads have been joined
[2026-03-19 05:31:39] 2026-03-19 04:30:33,400 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 05:31:39] 2026-03-19 04:30:33,400 | INFO     | traces error code: 0
[2026-03-19 05:31:39] 2026-03-19 04:30:33,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 05:31:39] 2026-03-19 04:30:33,547 [wrapper] ==== pilot stdout END ====
[2026-03-19 05:31:39] 2026-03-19 04:30:33,551 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 05:31:39] 2026-03-19 04:30:33,553 [wrapper] pilotpid: 3611504
[2026-03-19 05:31:39] 2026-03-19 04:30:33,555 [wrapper] Pilot exit status: 0
[2026-03-19 05:31:39] 2026-03-19 04:30:33,563 [wrapper] pandaids: 7056958702
[2026-03-19 05:31:39] 2026-03-19 04:30:33,704 [wrapper] cleanup supervisor_pilot   84118 3611505
[2026-03-19 05:31:39] 2026-03-19 04:30:33,707 [wrapper] Test setup, not cleaning
[2026-03-19 05:31:39] 2026-03-19 04:30:33,709 [wrapper] apfmon messages muted
[2026-03-19 05:31:39] 2026-03-19 04:30:33,711 [wrapper] ==== wrapper stdout END ====
[2026-03-19 05:31:39] 2026-03-19 04:30:33,713 [wrapper] ==== wrapper stderr END ====
[2026-03-19 05:31:39]  *** Error codes and diagnostics ***
[2026-03-19 05:31:39]     "exeErrorCode": 0,
[2026-03-19 05:31:39]     "exeErrorDiag": "",
[2026-03-19 05:31:39]     "pilotErrorCode": 0,
[2026-03-19 05:31:39]     "pilotErrorDiag": "",
[2026-03-19 05:31:39]  *** Listing of results directory ***
[2026-03-19 05:31:39] total 449936
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:24 queuedata.json
[2026-03-19 05:31:39] -rwx------. 1 boinc boinc     36322 Mar 16 16:24 runpilot2-wrapper.sh
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc       100 Mar 19 02:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 05:31:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 02:39 run_atlas
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc       105 Mar 19 02:39 job.xml
[2026-03-19 05:31:39] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:39 start_atlas.sh
[2026-03-19 05:31:39] drwxrwx--x. 2 boinc boinc      4096 Mar 19 02:39 shared
[2026-03-19 05:31:39] -rw-r--r--. 2 boinc boinc    597551 Mar 19 02:39 input.tar.gz
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc      6708 Mar 19 02:39 init_data.xml
[2026-03-19 05:31:39] -rw-r--r--. 2 boinc boinc 233845175 Mar 19 02:39 EVNT.49132113._000006.pool.root.1
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc         0 Mar 19 02:39 boinc_lockfile
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc      2642 Mar 19 02:39 pandaJob.out
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc   1010446 Mar 19 02:40 agis_schedconf.cvmfs.json
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc   1511579 Mar 19 02:40 agis_ddmendpoints.agis.ALL.json
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc       444 Mar 19 02:40 workernode_map.json
[2026-03-19 05:31:39] drwx------. 5 boinc boinc      4096 Mar 19 02:40 pilot3
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc 219380755 Mar 19 05:28 HITS.49179724._000144.pool.root.1
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc       529 Mar 19 05:29 boinc_task_state.xml
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc      1026 Mar 19 05:29 memory_monitor_summary.json
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc    349681 Mar 19 05:29 log.49179724._000144.job.log.tgz.1
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc      6349 Mar 19 05:29 heartbeat.json
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc        95 Mar 19 05:30 pilot_heartbeat.json
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc      4902 Mar 19 05:30 pilotlog.txt
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc   1432315 Mar 19 05:30 log.49179724._000144.job.log.1
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc       357 Mar 19 05:30 output.list
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc       620 Mar 19 05:30 runtime_log
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc   1802240 Mar 19 05:30 result.tar.gz
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc      9222 Mar 19 05:30 runtime_log.err
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc       665 Mar 19 05:30 1g6NDmPzOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzyxLDmCEpNtn.diag
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc        27 Mar 19 05:31 wrapper_checkpoint.txt
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc      8192 Mar 19 05:31 boinc_mmap_file
[2026-03-19 05:31:39] -rw-r--r--. 1 boinc boinc     20884 Mar 19 05:31 stderr.txt
[2026-03-19 05:31:39] HITS file was successfully produced:
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc 219380755 Mar 19 05:28 shared/HITS.pool.root.1
[2026-03-19 05:31:39]  *** Contents of shared directory: ***
[2026-03-19 05:31:39] total 444976
[2026-03-19 05:31:39] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:39 start_atlas.sh
[2026-03-19 05:31:39] -rw-r--r--. 2 boinc boinc    597551 Mar 19 02:39 input.tar.gz
[2026-03-19 05:31:39] -rw-r--r--. 2 boinc boinc 233845175 Mar 19 02:39 ATLAS.root_0
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc 219380755 Mar 19 05:28 HITS.pool.root.1
[2026-03-19 05:31:39] -rw-------. 1 boinc boinc   1802240 Mar 19 05:30 result.tar.gz
05:31:40 (3606699): run_atlas exited; CPU time 39565.167271
05:31:40 (3606699): called boinc_finish(0)

</stderr_txt>
]]>

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