Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:23:12 (1784479): wrapper (7.7.26015): starting
04:23:12 (1784479): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 04:23:12] Arguments: --nthreads 4
[2026-03-19 04:23:12] Threads: 4
[2026-03-19 04:23:12] Checking for CVMFS
[2026-03-19 04:23:12] No cvmfs_config command found, will try listing directly
[2026-03-19 04:23:12] CVMFS is ok
[2026-03-19 04:23:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 04:23:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 04:23:12] Further information can be found at the LHC@home message board.
[2026-03-19 04:23:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 04:23:12] Checking for apptainer binary...
[2026-03-19 04:23:12] which: no apptainer in ((null))
[2026-03-19 04:23:12] apptainer is not installed, using version from CVMFS
[2026-03-19 04:23:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 04:23:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-19 04:23:12] apptainer works
[2026-03-19 04:23:12] Set ATHENA_PROC_NUMBER=4
[2026-03-19 04:23:12] Set ATHENA_CORE_NUMBER=4
[2026-03-19 04:23:12] Starting ATLAS job with PandaID=7056958857
[2026-03-19 04:23:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 07:36:42]  *** The last 200 lines of the pilot log: ***
[2026-03-19 07:36:42] 2026-03-19 06:35:05,632 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7056958857/jobReport.json
[2026-03-19 07:36:42] 2026-03-19 06:35:05,634 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/0/workernode_map.json
[2026-03-19 07:36:42] 2026-03-19 06:35:05,635 | INFO     | this job has now completed (state=finished)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,635 | INFO     | log transfer has been attempted: DONE
[2026-03-19 07:36:42] 2026-03-19 06:35:05,635 | INFO     | job 7056958857 has finished - writing final server update
[2026-03-19 07:36:42] 2026-03-19 06:35:05,635 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2290186/.job.ad'
[2026-03-19 07:36:42] 2026-03-19 06:35:05,635 | INFO     | total number of processed events: 400 (read)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,653 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7056958857/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,654 | INFO     | extracted standard info from prmon json
[2026-03-19 07:36:42] 2026-03-19 06:35:05,654 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 07:36:42] 2026-03-19 06:35:05,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 07:36:42] 2026-03-19 06:35:05,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 07:36:42] 2026-03-19 06:35:05,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 07:36:42] 2026-03-19 06:35:05,656 | INFO     | fitting pss+swap vs Time
[2026-03-19 07:36:42] 2026-03-19 06:35:05,656 | INFO     | sum of square deviations: 2060343747.0
[2026-03-19 07:36:42] 2026-03-19 06:35:05,657 | INFO     | sum of deviations: 503697221.5000001
[2026-03-19 07:36:42] 2026-03-19 06:35:05,657 | INFO     | mean x: 1773896336.5
[2026-03-19 07:36:42] 2026-03-19 06:35:05,657 | INFO     | mean y: 2353541.313829787
[2026-03-19 07:36:42] 2026-03-19 06:35:05,657 | INFO     | intersect: -431315188.58868545
[2026-03-19 07:36:42] 2026-03-19 06:35:05,657 | INFO     | chi2: 1.1056251606237617
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | sum of square deviations: 1900284932.0
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | sum of deviations: 548081461.9999981
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | mean x: 1773896184.0
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | mean y: 2353583.601092896
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | intersect: -509274750.44020325
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | chi2: 1.1057684178688583
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | current chi2=1.1057684178688583 (change=-0.012957125995191745 %)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,658 | INFO     | right removable region: 182
[2026-03-19 07:36:42] 2026-03-19 06:35:05,659 | INFO     | sum of square deviations: 1900284932.0
[2026-03-19 07:36:42] 2026-03-19 06:35:05,659 | INFO     | sum of deviations: -15737626497.000004
[2026-03-19 07:36:42] 2026-03-19 06:35:05,659 | INFO     | mean x: 1773896489.0
[2026-03-19 07:36:42] 2026-03-19 06:35:05,659 | INFO     | mean y: 2368709.1038251366
[2026-03-19 07:36:42] 2026-03-19 06:35:05,659 | INFO     | intersect: 14693281591.752348
[2026-03-19 07:36:42] 2026-03-19 06:35:05,659 | INFO     | chi2: 0.032285374261698856
[2026-03-19 07:36:42] 2026-03-19 06:35:05,659 | INFO     | current chi2=0.032285374261698856 (change=97.07989873860285 %)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | sum of square deviations: 1748737904.5
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | sum of deviations: -12357629063.000008
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | mean x: 1773896641.5
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | mean y: 2365301.2921348317
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | intersect: 12537781063.33923
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | chi2: 0.026532917880277954
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | current chi2=0.026532917880277954 (change=17.81753042350579 %)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | left removable region: 20
[2026-03-19 07:36:42] 2026-03-19 06:35:05,660 | INFO     | sum of square deviations: 1318277740.5
[2026-03-19 07:36:42] 2026-03-19 06:35:05,661 | INFO     | sum of deviations: -5950109519.000002
[2026-03-19 07:36:42] 2026-03-19 06:35:05,661 | INFO     | mean x: 1773896763.5
[2026-03-19 07:36:42] 2026-03-19 06:35:05,661 | INFO     | mean y: 2358779.7283950616
[2026-03-19 07:36:42] 2026-03-19 06:35:05,661 | INFO     | intersect: 8008926511.215207
[2026-03-19 07:36:42] 2026-03-19 06:35:05,661 | INFO     | chi2: 0.012026579120019783
[2026-03-19 07:36:42] 2026-03-19 06:35:05,661 | INFO     | current memory leak: -4.51 B/s (using 162 data points, chi2=0.01)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,661 | INFO     | could have reported an average CPU frequency of 3558 MHz (10 samples)
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | ..............................
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . Timing measurements:
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . get job = 0 s
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . initial setup = 5 s
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . payload setup = 8 s
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . stage-in = 0 s
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . payload execution = 11469 s
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . stage-out = 0 s
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | . log creation = 0 s
[2026-03-19 07:36:42] 2026-03-19 06:35:05,662 | INFO     | ..............................
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | 
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | job summary report
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | --------------------------------------------------
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | PanDA job id: 7056958857
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | task id: 49179692
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | errors: (none)
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | pilot state: finished 
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | transexitcode: 0
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | exeerrorcode: 0
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | exeerrordiag: 
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | exitcode: 0
[2026-03-19 07:36:42] 2026-03-19 06:35:06,202 | INFO     | exitmsg: OK
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | cpuconsumptiontime: 44080 s
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | nevents: 400
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | neventsw: 0
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | pid: 1804092
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | pgrp: 1804092
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | corecount: 4
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | event service: False
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | sizes: {0: 2280336, 11: 2280336, 11481: 2309771, 11483: 2318793, 11485: 2318849, 11486: 2319043}
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | --------------------------------------------------
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | 
[2026-03-19 07:36:42] 2026-03-19 06:35:06,203 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/0
[2026-03-19 07:36:42] 2026-03-19 06:35:06,222 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,222 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,222 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | job 7056958857 has completed (purged errors)
[2026-03-19 07:36:42] 2026-03-19 06:35:06,223 | INFO     | overall cleanup function is called
[2026-03-19 07:36:42] 2026-03-19 06:35:07,230 | INFO     | --- collectZombieJob: --- 10, [1804092]
[2026-03-19 07:36:42] 2026-03-19 06:35:07,230 | INFO     | zombie collector waiting for pid 1804092
[2026-03-19 07:36:42] 2026-03-19 06:35:07,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 07:36:42] 2026-03-19 06:35:07,230 | INFO     | collected zombie processes
[2026-03-19 07:36:42] 2026-03-19 06:35:07,230 | INFO     | will attempt to kill all subprocesses of pid=1804092
[2026-03-19 07:36:42] 2026-03-19 06:35:07,740 | INFO     | process IDs to be killed: [1804092] (in reverse order)
[2026-03-19 07:36:42] 2026-03-19 06:35:07,993 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 07:36:42] 2026-03-19 06:35:07,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 07:36:42] 2026-03-19 06:35:08,026 | INFO     | did not find any defunct processes belonging to 1804092
[2026-03-19 07:36:42] 2026-03-19 06:35:08,060 | INFO     | did not find any defunct processes belonging to 1804092
[2026-03-19 07:36:42] 2026-03-19 06:35:08,060 | INFO     | ready for new job
[2026-03-19 07:36:42] 2026-03-19 06:35:08,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 07:36:42] 2026-03-19 06:35:08,062 | INFO     | **************************************
[2026-03-19 07:36:42] 2026-03-19 06:35:08,065 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 07:36:42] 2026-03-19 06:35:08,066 | INFO     | **************************************
[2026-03-19 07:36:42] 2026-03-19 06:35:08,066 | INFO     | 
[2026-03-19 07:36:42] 2026-03-19 06:35:08,072 | INFO     | architecture information:
[2026-03-19 07:36:42] 2026-03-19 06:35:08,072 | INFO     | executing command: cat /etc/os-release
[2026-03-19 07:36:42] 2026-03-19 06:35:08,084 | INFO     | cat /etc/os-release:
[2026-03-19 07:36:42] NAME="CentOS Linux"
[2026-03-19 07:36:42] VERSION="7 (Core)"
[2026-03-19 07:36:42] ID="centos"
[2026-03-19 07:36:42] ID_LIKE="rhel fedora"
[2026-03-19 07:36:42] VERSION_ID="7"
[2026-03-19 07:36:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 07:36:42] ANSI_COLOR="0;31"
[2026-03-19 07:36:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 07:36:42] HOME_URL="https://www.centos.org/"
[2026-03-19 07:36:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 07:36:42] 
[2026-03-19 07:36:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 07:36:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 07:36:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 07:36:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 07:36:42] 
[2026-03-19 07:36:42] 2026-03-19 06:35:08,084 | INFO     | **************************************
[2026-03-19 07:36:42] 2026-03-19 06:35:08,586 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/0
[2026-03-19 07:36:42] 2026-03-19 06:35:08,604 | INFO     | sufficient remaining disk space (84110475264 B)
[2026-03-19 07:36:42] 2026-03-19 06:35:08,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 07:36:42] 2026-03-19 06:35:08,605 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 07:36:42] 2026-03-19 06:35:08,605 | INFO     | update_server=False
[2026-03-19 07:36:42] 2026-03-19 06:35:08,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 07:36:42] 2026-03-19 06:35:08,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 07:36:42] 2026-03-19 06:35:08,714 | INFO     | all job control threads have been joined
[2026-03-19 07:36:42] 2026-03-19 06:35:08,757 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-19 07:36:42] 2026-03-19 06:35:08,757 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-19 07:36:42] 2026-03-19 06:35:08,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 07:36:42] 2026-03-19 06:35:08,758 | INFO     | will abort loop
[2026-03-19 07:36:42] 2026-03-19 06:35:09,314 | INFO     | all data control threads have been joined
[2026-03-19 07:36:42] 2026-03-19 06:35:09,609 | INFO     | [job] retrieve thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:09,627 | INFO     | [payload] validate_post thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:09,651 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:09,658 | INFO     | [job] validate thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:09,709 | INFO     | all payload control threads have been joined
[2026-03-19 07:36:42] 2026-03-19 06:35:09,719 | INFO     | [job] control thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:09,762 | INFO     | [job] job monitor thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:10,254 | INFO     | [payload] failed_post thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:10,319 | INFO     | [data] control thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:10,557 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:10,610 | INFO     | [data] copytool_out thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:10,714 | INFO     | [payload] control thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:10,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 07:36:42] 2026-03-19 06:35:10,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 07:36:42] 2026-03-19 06:35:10,816 | INFO     | [data] copytool_in thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:11,053 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:11,728 | INFO     | [job] queue monitor thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:14,756 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:18,993 | INFO     | job.realtimelogging is not enabled
[2026-03-19 07:36:42] 2026-03-19 06:35:20,000 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 07:36:42] 2026-03-19 06:35:38,186 | INFO     | PID=1790674 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 07:36:42] 2026-03-19 06:35:38,186 | INFO     | .. there are 35 such processes running
[2026-03-19 07:36:42] 2026-03-19 06:35:38,187 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 07:36:42] 2026-03-19 06:35:38,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 07:36:42] 2026-03-19 06:35:38,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 07:36:42] 2026-03-19 06:35:46,911 | INFO     | [monitor] cgroup control has ended
[2026-03-19 07:36:42] 2026-03-19 06:35:48,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23372349228864)>', '<ExcThread(monitor, started 23372103939840)>']
[2026-03-19 07:36:42] 2026-03-19 06:35:49,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 07:36:42] 2026-03-19 06:35:49,241 | INFO     | [monitor] control thread has ended
[2026-03-19 07:36:42] 2026-03-19 06:35:54,020 | INFO     | all workflow threads have been joined
[2026-03-19 07:36:42] 2026-03-19 06:35:54,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 07:36:42] 2026-03-19 06:35:54,020 | INFO     | traces error code: 0
[2026-03-19 07:36:42] 2026-03-19 06:35:54,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 07:36:42] 2026-03-19 06:35:54,173 [wrapper] ==== pilot stdout END ====
[2026-03-19 07:36:42] 2026-03-19 06:35:54,180 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 07:36:42] 2026-03-19 06:35:54,183 [wrapper] pilotpid: 1790674
[2026-03-19 07:36:42] 2026-03-19 06:35:54,187 [wrapper] Pilot exit status: 0
[2026-03-19 07:36:42] 2026-03-19 06:35:54,195 [wrapper] pandaids: 7056958857
[2026-03-19 07:36:42] 2026-03-19 06:35:54,341 [wrapper] cleanup supervisor_pilot 2465043 1790675
[2026-03-19 07:36:42] 2026-03-19 06:35:54,345 [wrapper] Test setup, not cleaning
[2026-03-19 07:36:42] 2026-03-19 06:35:54,350 [wrapper] apfmon messages muted
[2026-03-19 07:36:42] 2026-03-19 06:35:54,353 [wrapper] ==== wrapper stdout END ====
[2026-03-19 07:36:42] 2026-03-19 06:35:54,356 [wrapper] ==== wrapper stderr END ====
[2026-03-19 07:36:42]  *** Error codes and diagnostics ***
[2026-03-19 07:36:42]     "exeErrorCode": 0,
[2026-03-19 07:36:42]     "exeErrorDiag": "",
[2026-03-19 07:36:42]     "pilotErrorCode": 0,
[2026-03-19 07:36:42]     "pilotErrorDiag": "",
[2026-03-19 07:36:42]  *** Listing of results directory ***
[2026-03-19 07:36:42] total 466312
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:24 queuedata.json
[2026-03-19 07:36:42] -rwx------. 1 boinc boinc     36322 Mar 16 16:24 runpilot2-wrapper.sh
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc       100 Mar 19 04:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 07:36:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 04:23 run_atlas
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc       105 Mar 19 04:23 job.xml
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc      6708 Mar 19 04:23 init_data.xml
[2026-03-19 07:36:42] -rw-r--r--. 2 boinc boinc 236576355 Mar 19 04:23 EVNT.49132028._000006.pool.root.1
[2026-03-19 07:36:42] -rw-r--r--. 2 boinc boinc     15845 Mar 19 04:23 start_atlas.sh
[2026-03-19 07:36:42] drwxrwx--x. 2 boinc boinc      4096 Mar 19 04:23 shared
[2026-03-19 07:36:42] -rw-r--r--. 2 boinc boinc    597542 Mar 19 04:23 input.tar.gz
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc         0 Mar 19 04:23 boinc_lockfile
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc      2629 Mar 19 04:23 pandaJob.out
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc   1010446 Mar 19 04:23 agis_schedconf.cvmfs.json
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc       444 Mar 19 04:23 workernode_map.json
[2026-03-19 07:36:42] drwx------. 5 boinc boinc      4096 Mar 19 04:23 pilot3
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc 233012390 Mar 19 07:34 HITS.49179692._000149.pool.root.1
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc       528 Mar 19 07:34 boinc_task_state.xml
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc      1031 Mar 19 07:34 memory_monitor_summary.json
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc   1511579 Mar 19 07:35 agis_ddmendpoints.agis.ALL.json
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc    378202 Mar 19 07:35 log.49179692._000149.job.log.tgz.1
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc      6351 Mar 19 07:35 heartbeat.json
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc        95 Mar 19 07:35 pilot_heartbeat.json
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc      5088 Mar 19 07:35 pilotlog.txt
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc   1607578 Mar 19 07:35 log.49179692._000149.job.log.1
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc       357 Mar 19 07:35 output.list
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc       620 Mar 19 07:35 runtime_log
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc   2007040 Mar 19 07:35 result.tar.gz
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc       665 Mar 19 07:35 zG9MDmLzOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvluLDmds1vEn.diag
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc      9222 Mar 19 07:35 runtime_log.err
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc        26 Mar 19 07:36 wrapper_checkpoint.txt
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc      8192 Mar 19 07:36 boinc_mmap_file
[2026-03-19 07:36:42] -rw-r--r--. 1 boinc boinc     21127 Mar 19 07:36 stderr.txt
[2026-03-19 07:36:42] HITS file was successfully produced:
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc 233012390 Mar 19 07:34 shared/HITS.pool.root.1
[2026-03-19 07:36:42]  *** Contents of shared directory: ***
[2026-03-19 07:36:42] total 461152
[2026-03-19 07:36:42] -rw-r--r--. 2 boinc boinc 236576355 Mar 19 04:23 ATLAS.root_0
[2026-03-19 07:36:42] -rw-r--r--. 2 boinc boinc     15845 Mar 19 04:23 start_atlas.sh
[2026-03-19 07:36:42] -rw-r--r--. 2 boinc boinc    597542 Mar 19 04:23 input.tar.gz
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc 233012390 Mar 19 07:34 HITS.pool.root.1
[2026-03-19 07:36:42] -rw-------. 1 boinc boinc   2007040 Mar 19 07:35 result.tar.gz
07:36:43 (1784479): run_atlas exited; CPU time 44644.171811
07:36:43 (1784479): called boinc_finish(0)

</stderr_txt>
]]>

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