Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:44:55 (2184670): wrapper (7.7.26015): starting
07:44:55 (2184670): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 07:44:55] Arguments: --nthreads 4
[2026-03-18 07:44:55] Threads: 4
[2026-03-18 07:44:55] Checking for CVMFS
[2026-03-18 07:44:55] No cvmfs_config command found, will try listing directly
[2026-03-18 07:44:55] CVMFS is ok
[2026-03-18 07:44:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 07:44:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 07:44:55] Further information can be found at the LHC@home message board.
[2026-03-18 07:44:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 07:44:55] Checking for apptainer binary...
[2026-03-18 07:44:55] which: no apptainer in ((null))
[2026-03-18 07:44:55] apptainer is not installed, using version from CVMFS
[2026-03-18 07:44:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 07:44:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-18 07:44:55] apptainer works
[2026-03-18 07:44:55] Set ATHENA_PROC_NUMBER=4
[2026-03-18 07:44:55] Set ATHENA_CORE_NUMBER=4
[2026-03-18 07:44:55] Starting ATLAS job with PandaID=7056955617
[2026-03-18 07:44:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 10:40:33]  *** The last 200 lines of the pilot log: ***
[2026-03-18 10:40:33] 2026-03-18 09:39:52,911 | INFO     | this job has now completed (state=finished)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,912 | INFO     | log transfer has been attempted: DONE
[2026-03-18 10:40:33] 2026-03-18 09:39:52,912 | INFO     | job 7056955617 has finished - writing final server update
[2026-03-18 10:40:33] 2026-03-18 09:39:52,912 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_402048/.job.ad'
[2026-03-18 10:40:33] 2026-03-18 09:39:52,912 | INFO     | total number of processed events: 400 (read)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,930 | INFO     | using path: /var/lib/boinc/var/slot76/slots/7/PanDA_Pilot-7056955617/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,930 | INFO     | extracted standard info from prmon json
[2026-03-18 10:40:33] 2026-03-18 09:39:52,930 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 10:40:33] 2026-03-18 09:39:52,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 10:40:33] 2026-03-18 09:39:52,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 10:40:33] 2026-03-18 09:39:52,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 10:40:33] 2026-03-18 09:39:52,932 | INFO     | fitting pss+swap vs Time
[2026-03-18 10:40:33] 2026-03-18 09:39:52,933 | INFO     | sum of square deviations: 1577789583.0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,933 | INFO     | sum of deviations: 19053611354.5
[2026-03-18 10:40:33] 2026-03-18 09:39:52,933 | INFO     | mean x: 1773821546.5
[2026-03-18 10:40:33] 2026-03-18 09:39:52,933 | INFO     | mean y: 2337821.819767442
[2026-03-18 10:40:33] 2026-03-18 09:39:52,933 | INFO     | intersect: -21418583398.22428
[2026-03-18 10:40:33] 2026-03-18 09:39:52,933 | INFO     | chi2: 1.0926970812812775
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | sum of square deviations: 1444149868.0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | sum of deviations: 18397919579.0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | mean x: 1773821394.0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | mean y: 2337073.377245509
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | intersect: -22595472251.992348
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | chi2: 1.0933759667802394
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | current chi2=1.0933759667802394 (change=-0.06212934129611113 %)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,934 | INFO     | right removable region: 166
[2026-03-18 10:40:33] 2026-03-18 09:39:52,935 | INFO     | sum of square deviations: 1444149868.0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,935 | INFO     | sum of deviations: 2069954845.9999998
[2026-03-18 10:40:33] 2026-03-18 09:39:52,935 | INFO     | mean x: 1773821699.0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,935 | INFO     | mean y: 2356855.401197605
[2026-03-18 10:40:33] 2026-03-18 09:39:52,935 | INFO     | intersect: -2540129144.940287
[2026-03-18 10:40:33] 2026-03-18 09:39:52,935 | INFO     | chi2: 0.002859357607043438
[2026-03-18 10:40:33] 2026-03-18 09:39:52,935 | INFO     | current chi2=0.002859357607043438 (change=99.73832110874767 %)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | sum of square deviations: 1318277740.5
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | sum of deviations: 2217553526.500001
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | mean x: 1773821851.5
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | mean y: 2356671.6975308643
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | intersect: -2981494743.9265094
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | chi2: 0.002590712452907334
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | current chi2=0.002590712452907334 (change=9.395297512782317 %)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | left removable region: 20
[2026-03-18 10:40:33] 2026-03-18 09:39:52,936 | INFO     | sum of square deviations: 964976232.5
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | sum of deviations: 2851679514.5
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | mean x: 1773821973.5
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | mean y: 2355267.883561644
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | intersect: -5239609885.076733
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | chi2: 0.0010396852891671818
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | current memory leak: 2.96 B/s (using 146 data points, chi2=0.00)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | could have reported an average CPU frequency of 3558 MHz (9 samples)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | ..............................
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | . Timing measurements:
[2026-03-18 10:40:33] 2026-03-18 09:39:52,937 | INFO     | . get job = 0 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,938 | INFO     | . initial setup = 5 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,938 | INFO     | . payload setup = 7 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,938 | INFO     | . stage-in = 0 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,938 | INFO     | . payload execution = 10461 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,938 | INFO     | . stage-out = 0 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,938 | INFO     | . log creation = 0 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,938 | INFO     | ..............................
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | 
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | job summary report
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | --------------------------------------------------
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | PanDA job id: 7056955617
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | task id: 49179534
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | errors: (none)
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | pilot state: finished 
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | transexitcode: 0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | exeerrorcode: 0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | exeerrordiag: 
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | exitcode: 0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | exitmsg: OK
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | cpuconsumptiontime: 40243 s
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | nevents: 400
[2026-03-18 10:40:33] 2026-03-18 09:39:52,986 | INFO     | neventsw: 0
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | pid: 2195603
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | pgrp: 2195603
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | corecount: 4
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | event service: False
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | sizes: {0: 2279202, 1: 2280331, 11: 2280331, 10472: 2309363, 10473: 2318383, 10474: 2318825}
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | --------------------------------------------------
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | 
[2026-03-18 10:40:33] 2026-03-18 09:39:52,987 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/7
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | job 7056955617 has completed (purged errors)
[2026-03-18 10:40:33] 2026-03-18 09:39:53,009 | INFO     | overall cleanup function is called
[2026-03-18 10:40:33] 2026-03-18 09:39:54,016 | INFO     | --- collectZombieJob: --- 10, [2195603]
[2026-03-18 10:40:33] 2026-03-18 09:39:54,016 | INFO     | zombie collector waiting for pid 2195603
[2026-03-18 10:40:33] 2026-03-18 09:39:54,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 10:40:33] 2026-03-18 09:39:54,016 | INFO     | collected zombie processes
[2026-03-18 10:40:33] 2026-03-18 09:39:54,016 | INFO     | will attempt to kill all subprocesses of pid=2195603
[2026-03-18 10:40:33] 2026-03-18 09:39:54,527 | INFO     | process IDs to be killed: [2195603] (in reverse order)
[2026-03-18 10:40:33] 2026-03-18 09:39:54,793 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 10:40:33] 2026-03-18 09:39:54,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 10:40:33] 2026-03-18 09:39:54,824 | INFO     | did not find any defunct processes belonging to 2195603
[2026-03-18 10:40:33] 2026-03-18 09:39:54,854 | INFO     | did not find any defunct processes belonging to 2195603
[2026-03-18 10:40:33] 2026-03-18 09:39:54,854 | INFO     | ready for new job
[2026-03-18 10:40:33] 2026-03-18 09:39:54,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 10:40:33] 2026-03-18 09:39:54,855 | INFO     | **************************************
[2026-03-18 10:40:33] 2026-03-18 09:39:54,855 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 10:40:33] 2026-03-18 09:39:54,855 | INFO     | **************************************
[2026-03-18 10:40:33] 2026-03-18 09:39:54,855 | INFO     | 
[2026-03-18 10:40:33] 2026-03-18 09:39:54,861 | INFO     | architecture information:
[2026-03-18 10:40:33] 2026-03-18 09:39:54,861 | INFO     | executing command: cat /etc/os-release
[2026-03-18 10:40:33] 2026-03-18 09:39:54,885 | INFO     | cat /etc/os-release:
[2026-03-18 10:40:33] NAME="CentOS Linux"
[2026-03-18 10:40:33] VERSION="7 (Core)"
[2026-03-18 10:40:33] ID="centos"
[2026-03-18 10:40:33] ID_LIKE="rhel fedora"
[2026-03-18 10:40:33] VERSION_ID="7"
[2026-03-18 10:40:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 10:40:33] ANSI_COLOR="0;31"
[2026-03-18 10:40:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 10:40:33] HOME_URL="https://www.centos.org/"
[2026-03-18 10:40:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 10:40:33] 
[2026-03-18 10:40:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 10:40:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 10:40:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 10:40:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 10:40:33] 
[2026-03-18 10:40:33] 2026-03-18 09:39:54,885 | INFO     | **************************************
[2026-03-18 10:40:33] 2026-03-18 09:39:55,389 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/7
[2026-03-18 10:40:33] 2026-03-18 09:39:55,404 | INFO     | sufficient remaining disk space (20662190080 B)
[2026-03-18 10:40:33] 2026-03-18 09:39:55,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 10:40:33] 2026-03-18 09:39:55,405 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 10:40:33] 2026-03-18 09:39:55,405 | INFO     | update_server=False
[2026-03-18 10:40:33] 2026-03-18 09:39:55,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 10:40:33] 2026-03-18 09:39:55,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 10:40:33] 2026-03-18 09:39:55,582 | INFO     | all data control threads have been joined
[2026-03-18 10:40:33] 2026-03-18 09:39:55,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 10:40:33] 2026-03-18 09:39:55,689 | INFO     | all job control threads have been joined
[2026-03-18 10:40:33] 2026-03-18 09:39:56,173 | INFO     | all payload control threads have been joined
[2026-03-18 10:40:33] 2026-03-18 09:39:56,410 | INFO     | [job] retrieve thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:56,561 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:56,582 | INFO     | [job] validate thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:56,587 | INFO     | [data] control thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:56,694 | INFO     | [job] control thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:56,827 | INFO     | [payload] failed_post thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:56,884 | INFO     | [data] copytool_in thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:56,984 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:57,102 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:57,178 | INFO     | [payload] control thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:57,313 | INFO     | [payload] validate_post thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:57,588 | INFO     | [data] copytool_out thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:57,662 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:57,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:40:33] 2026-03-18 09:39:58,524 | WARNING  | process 2195603 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 10:40:33] 2026-03-18 09:39:58,858 | INFO     | using path: /var/lib/boinc/var/slot76/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 10:40:33] 2026-03-18 09:39:59,001 | INFO     | [job] queue monitor thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:39:59,380 | INFO     | number of running child processes to parent process 2195603: 1
[2026-03-18 10:40:33] 2026-03-18 09:39:59,380 | INFO     | maximum number of monitored processes: 6
[2026-03-18 10:40:33] 2026-03-18 09:39:59,380 | INFO     | aborting job monitoring since job object (job id=7056955617) has expired
[2026-03-18 10:40:33] 2026-03-18 09:39:59,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:40:33] 2026-03-18 09:39:59,380 | INFO     | will abort loop
[2026-03-18 10:40:33] 2026-03-18 09:39:59,410 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:40:00,385 | INFO     | [job] job monitor thread has finished
[2026-03-18 10:40:33] 2026-03-18 09:40:25,795 | INFO     | [monitor] cgroup control has ended
[2026-03-18 10:40:33] 2026-03-18 09:40:25,966 | INFO     | PID=2189492 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 10:40:33] 2026-03-18 09:40:25,966 | INFO     | .. there are 47 such processes running
[2026-03-18 10:40:33] 2026-03-18 09:40:25,967 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 10:40:33] 2026-03-18 09:40:25,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 10:40:33] 2026-03-18 09:40:25,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 10:40:33] 2026-03-18 09:40:27,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22826696320832)>', '<ExcThread(monitor, started 22826456459008)>']
[2026-03-18 10:40:33] 2026-03-18 09:40:27,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 10:40:33] 2026-03-18 09:40:27,977 | INFO     | [monitor] control thread has ended
[2026-03-18 10:40:33] 2026-03-18 09:40:32,840 | INFO     | all workflow threads have been joined
[2026-03-18 10:40:33] 2026-03-18 09:40:32,840 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 10:40:33] 2026-03-18 09:40:32,840 | INFO     | traces error code: 0
[2026-03-18 10:40:33] 2026-03-18 09:40:32,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 10:40:33] 2026-03-18 09:40:32,979 [wrapper] ==== pilot stdout END ====
[2026-03-18 10:40:33] 2026-03-18 09:40:32,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 10:40:33] 2026-03-18 09:40:32,988 [wrapper] pilotpid: 2189492
[2026-03-18 10:40:33] 2026-03-18 09:40:32,991 [wrapper] Pilot exit status: 0
[2026-03-18 10:40:33] 2026-03-18 09:40:33,003 [wrapper] pandaids: 7056955617
[2026-03-18 10:40:33] 2026-03-18 09:40:33,137 [wrapper] cleanup supervisor_pilot 3097667 2189493
[2026-03-18 10:40:33] 2026-03-18 09:40:33,140 [wrapper] Test setup, not cleaning
[2026-03-18 10:40:33] 2026-03-18 09:40:33,143 [wrapper] apfmon messages muted
[2026-03-18 10:40:33] 2026-03-18 09:40:33,145 [wrapper] ==== wrapper stdout END ====
[2026-03-18 10:40:33] 2026-03-18 09:40:33,147 [wrapper] ==== wrapper stderr END ====
[2026-03-18 10:40:33]  *** Error codes and diagnostics ***
[2026-03-18 10:40:33]     "exeErrorCode": 0,
[2026-03-18 10:40:33]     "exeErrorDiag": "",
[2026-03-18 10:40:33]     "pilotErrorCode": 0,
[2026-03-18 10:40:33]     "pilotErrorDiag": "",
[2026-03-18 10:40:33]  *** Listing of results directory ***
[2026-03-18 10:40:33] total 461128
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:23 queuedata.json
[2026-03-18 10:40:33] -rwx------. 1 boinc boinc     36322 Mar 16 16:23 runpilot2-wrapper.sh
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc       100 Mar 18 07:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 10:40:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 07:44 run_atlas
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc       105 Mar 18 07:44 job.xml
[2026-03-18 10:40:33] -rw-r--r--. 2 boinc boinc    597528 Mar 18 07:44 input.tar.gz
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc      6706 Mar 18 07:44 init_data.xml
[2026-03-18 10:40:33] -rw-r--r--. 2 boinc boinc 238797406 Mar 18 07:44 EVNT.49131703._000001.pool.root.1
[2026-03-18 10:40:33] -rw-r--r--. 2 boinc boinc     15845 Mar 18 07:44 start_atlas.sh
[2026-03-18 10:40:33] drwxrwx--x. 2 boinc boinc      4096 Mar 18 07:44 shared
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc         0 Mar 18 07:44 boinc_lockfile
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc      2610 Mar 18 07:44 pandaJob.out
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc   1011507 Mar 18 07:45 agis_schedconf.cvmfs.json
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc   1511579 Mar 18 07:45 agis_ddmendpoints.agis.ALL.json
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc       443 Mar 18 07:45 workernode_map.json
[2026-03-18 10:40:33] drwx------. 5 boinc boinc      4096 Mar 18 07:45 pilot3
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc 225846174 Mar 18 10:39 HITS.49179534._000002.pool.root.1
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc       531 Mar 18 10:39 boinc_task_state.xml
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc      1032 Mar 18 10:39 memory_monitor_summary.json
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc    331291 Mar 18 10:39 log.49179534._000002.job.log.tgz.1
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc      6353 Mar 18 10:39 heartbeat.json
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc      8192 Mar 18 10:40 boinc_mmap_file
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc        28 Mar 18 10:40 wrapper_checkpoint.txt
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc        95 Mar 18 10:40 pilot_heartbeat.json
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc      5361 Mar 18 10:40 pilotlog.txt
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc   1473543 Mar 18 10:40 log.49179534._000002.job.log.1
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc       357 Mar 18 10:40 output.list
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc       620 Mar 18 10:40 runtime_log
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc   1822720 Mar 18 10:40 result.tar.gz
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc      9205 Mar 18 10:40 runtime_log.err
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc       665 Mar 18 10:40 KDCNDmkxOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDguLDmRyLNGm.diag
[2026-03-18 10:40:33] -rw-r--r--. 1 boinc boinc     21111 Mar 18 10:40 stderr.txt
[2026-03-18 10:40:33] HITS file was successfully produced:
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc 225846174 Mar 18 10:39 shared/HITS.pool.root.1
[2026-03-18 10:40:33]  *** Contents of shared directory: ***
[2026-03-18 10:40:33] total 456148
[2026-03-18 10:40:33] -rw-r--r--. 2 boinc boinc    597528 Mar 18 07:44 input.tar.gz
[2026-03-18 10:40:33] -rw-r--r--. 2 boinc boinc 238797406 Mar 18 07:44 ATLAS.root_0
[2026-03-18 10:40:33] -rw-r--r--. 2 boinc boinc     15845 Mar 18 07:44 start_atlas.sh
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc 225846174 Mar 18 10:39 HITS.pool.root.1
[2026-03-18 10:40:33] -rw-------. 1 boinc boinc   1822720 Mar 18 10:40 result.tar.gz
10:40:34 (2184670): run_atlas exited; CPU time 40728.993112
10:40:34 (2184670): called boinc_finish(0)

</stderr_txt>
]]>

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