Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:02:17 (4189561): wrapper (7.7.26015): starting
22:02:17 (4189561): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 22:02:17] Arguments: --nthreads 4
[2026-03-18 22:02:17] Threads: 4
[2026-03-18 22:02:17] Checking for CVMFS
[2026-03-18 22:02:17] No cvmfs_config command found, will try listing directly
[2026-03-18 22:02:17] CVMFS is ok
[2026-03-18 22:02:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 22:02:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 22:02:17] Further information can be found at the LHC@home message board.
[2026-03-18 22:02:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 22:02:17] Checking for apptainer binary...
[2026-03-18 22:02:17] which: no apptainer in ((null))
[2026-03-18 22:02:17] apptainer is not installed, using version from CVMFS
[2026-03-18 22:02:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 22:02:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot208/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-18 22:02:18] apptainer works
[2026-03-18 22:02:18] Set ATHENA_PROC_NUMBER=4
[2026-03-18 22:02:18] Set ATHENA_CORE_NUMBER=4
[2026-03-18 22:02:18] Starting ATLAS job with PandaID=7056948658
[2026-03-18 22:02:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot208/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 01:16:03]  *** The last 200 lines of the pilot log: ***
[2026-03-19 01:16:03] 2026-03-19 00:15:18,364 | INFO     | time since job start (11560s) is within the limit (345600.0s)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,487 | INFO     | job 7056948658 has state=finished
[2026-03-19 01:16:03] 2026-03-19 00:15:18,487 | INFO     | preparing for final server update for job 7056948658 in state='finished'
[2026-03-19 01:16:03] 2026-03-19 00:15:18,488 | INFO     | reading metadata from: /var/lib/boinc/var/slot208/slots/0/PanDA_Pilot-7056948658/jobReport.json
[2026-03-19 01:16:03] 2026-03-19 00:15:18,489 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot208/slots/0/workernode_map.json
[2026-03-19 01:16:03] 2026-03-19 00:15:18,490 | INFO     | this job has now completed (state=finished)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,490 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,490 | INFO     | log transfer has been attempted: DONE
[2026-03-19 01:16:03] 2026-03-19 00:15:18,490 | INFO     | job 7056948658 has finished - writing final server update
[2026-03-19 01:16:03] 2026-03-19 00:15:18,490 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3862727/.job.ad'
[2026-03-19 01:16:03] 2026-03-19 00:15:18,490 | INFO     | total number of processed events: 400 (read)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,511 | INFO     | using path: /var/lib/boinc/var/slot208/slots/0/PanDA_Pilot-7056948658/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,511 | INFO     | extracted standard info from prmon json
[2026-03-19 01:16:03] 2026-03-19 00:15:18,511 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 01:16:03] 2026-03-19 00:15:18,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 01:16:03] 2026-03-19 00:15:18,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 01:16:03] 2026-03-19 00:15:18,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 01:16:03] 2026-03-19 00:15:18,514 | INFO     | fitting pss+swap vs Time
[2026-03-19 01:16:03] 2026-03-19 00:15:18,514 | INFO     | sum of square deviations: 2093397390.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,515 | INFO     | sum of deviations: 29516259649.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,515 | INFO     | mean x: 1773873520.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,515 | INFO     | mean y: 2328381.693121693
[2026-03-19 01:16:03] 2026-03-19 00:15:18,515 | INFO     | intersect: -25008742927.995285
[2026-03-19 01:16:03] 2026-03-19 00:15:18,515 | INFO     | chi2: 1.0981011297078878
[2026-03-19 01:16:03] 2026-03-19 00:15:18,515 | INFO     | sum of square deviations: 1931608310.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | sum of deviations: 28426300791.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | mean x: 1773873367.5
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | mean y: 2327354.315217391
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | intersect: -26102684541.03073
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | chi2: 1.0984464596195855
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | current chi2=1.0984464596195855 (change=-0.03144791516512157 %)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | right removable region: 183
[2026-03-19 01:16:03] 2026-03-19 00:15:18,516 | INFO     | sum of square deviations: 1931608310.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,517 | INFO     | sum of deviations: 9929260451.5
[2026-03-19 01:16:03] 2026-03-19 00:15:18,517 | INFO     | mean x: 1773873672.5
[2026-03-19 01:16:03] 2026-03-19 00:15:18,517 | INFO     | mean y: 2346561.7336956523
[2026-03-19 01:16:03] 2026-03-19 00:15:18,517 | INFO     | intersect: -9116093036.567324
[2026-03-19 01:16:03] 2026-03-19 00:15:18,517 | INFO     | chi2: 0.0011534982842811713
[2026-03-19 01:16:03] 2026-03-19 00:15:18,517 | INFO     | current chi2=0.0011534982842811713 (change=99.894955186451 %)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,517 | INFO     | sum of square deviations: 1778377530.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | sum of deviations: 8856601956.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | mean x: 1773873825.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | mean y: 2347627.4301675977
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | intersect: -8831825163.873714
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | chi2: 0.0010253244790172664
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | current chi2=0.0010253244790172664 (change=11.111746502837612 %)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | left removable region: 20
[2026-03-19 01:16:03] 2026-03-19 00:15:18,518 | INFO     | sum of square deviations: 1342841922.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | sum of deviations: 6687548218.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | mean x: 1773873947.0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | mean y: 2348816.6503067487
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | intersect: -8831801621.212234
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | chi2: 0.0008372785070560764
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | current memory leak: 4.98 B/s (using 163 data points, chi2=0.00)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | could have reported an average CPU frequency of 3547 MHz (10 samples)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | ..............................
[2026-03-19 01:16:03] 2026-03-19 00:15:18,519 | INFO     | . Timing measurements:
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | . get job = 0 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | . initial setup = 7 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | . payload setup = 11 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | . stage-in = 0 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | . payload execution = 11527 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | . stage-out = 0 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | . log creation = 0 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,520 | INFO     | ..............................
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | 
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | job summary report
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | --------------------------------------------------
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | PanDA job id: 7056948658
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | task id: 49179087
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | errors: (none)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | pilot state: finished 
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | transexitcode: 0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | exeerrorcode: 0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | exeerrordiag: 
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | exitcode: 0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | exitmsg: OK
[2026-03-19 01:16:03] 2026-03-19 00:15:18,648 | INFO     | cpuconsumptiontime: 43874 s
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | nevents: 400
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | neventsw: 0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | pid: 7921
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | pgrp: 7921
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | corecount: 4
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | event service: False
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | sizes: {0: 2280399, 11: 2280399, 11542: 2310332, 11543: 2319354, 11545: 2319410, 11548: 2319604}
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | --------------------------------------------------
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | 
[2026-03-19 01:16:03] 2026-03-19 00:15:18,649 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot208/slots/0
[2026-03-19 01:16:03] 2026-03-19 00:15:18,668 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | job 7056948658 has completed (purged errors)
[2026-03-19 01:16:03] 2026-03-19 00:15:18,669 | INFO     | overall cleanup function is called
[2026-03-19 01:16:03] 2026-03-19 00:15:19,677 | INFO     | --- collectZombieJob: --- 10, [7921]
[2026-03-19 01:16:03] 2026-03-19 00:15:19,677 | INFO     | zombie collector waiting for pid 7921
[2026-03-19 01:16:03] 2026-03-19 00:15:19,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 01:16:03] 2026-03-19 00:15:19,677 | INFO     | collected zombie processes
[2026-03-19 01:16:03] 2026-03-19 00:15:19,677 | INFO     | will attempt to kill all subprocesses of pid=7921
[2026-03-19 01:16:03] 2026-03-19 00:15:20,151 | INFO     | process IDs to be killed: [7921] (in reverse order)
[2026-03-19 01:16:03] 2026-03-19 00:15:20,389 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 01:16:03] 2026-03-19 00:15:20,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 01:16:03] 2026-03-19 00:15:20,419 | INFO     | did not find any defunct processes belonging to 7921
[2026-03-19 01:16:03] 2026-03-19 00:15:20,449 | INFO     | did not find any defunct processes belonging to 7921
[2026-03-19 01:16:03] 2026-03-19 00:15:20,449 | INFO     | ready for new job
[2026-03-19 01:16:03] 2026-03-19 00:15:20,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 01:16:03] 2026-03-19 00:15:20,451 | INFO     | **************************************
[2026-03-19 01:16:03] 2026-03-19 00:15:20,451 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 01:16:03] 2026-03-19 00:15:20,451 | INFO     | **************************************
[2026-03-19 01:16:03] 2026-03-19 00:15:20,451 | INFO     | 
[2026-03-19 01:16:03] 2026-03-19 00:15:20,457 | INFO     | architecture information:
[2026-03-19 01:16:03] 2026-03-19 00:15:20,457 | INFO     | executing command: cat /etc/os-release
[2026-03-19 01:16:03] 2026-03-19 00:15:20,470 | INFO     | cat /etc/os-release:
[2026-03-19 01:16:03] NAME="CentOS Linux"
[2026-03-19 01:16:03] VERSION="7 (Core)"
[2026-03-19 01:16:03] ID="centos"
[2026-03-19 01:16:03] ID_LIKE="rhel fedora"
[2026-03-19 01:16:03] VERSION_ID="7"
[2026-03-19 01:16:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 01:16:03] ANSI_COLOR="0;31"
[2026-03-19 01:16:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 01:16:03] HOME_URL="https://www.centos.org/"
[2026-03-19 01:16:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 01:16:03] 
[2026-03-19 01:16:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 01:16:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 01:16:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 01:16:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 01:16:03] 
[2026-03-19 01:16:03] 2026-03-19 00:15:20,471 | INFO     | **************************************
[2026-03-19 01:16:03] 2026-03-19 00:15:20,974 | INFO     | executing command: df -mP /var/lib/boinc/var/slot208/slots/0
[2026-03-19 01:16:03] 2026-03-19 00:15:20,988 | INFO     | sufficient remaining disk space (19755171840 B)
[2026-03-19 01:16:03] 2026-03-19 00:15:20,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 01:16:03] 2026-03-19 00:15:20,989 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 01:16:03] 2026-03-19 00:15:20,989 | INFO     | update_server=False
[2026-03-19 01:16:03] 2026-03-19 00:15:20,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 01:16:03] 2026-03-19 00:15:20,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:16:03] 2026-03-19 00:15:20,989 | INFO     | aborting loop
[2026-03-19 01:16:03] 2026-03-19 00:15:20,990 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 01:16:03] 2026-03-19 00:15:21,332 | INFO     | all data control threads have been joined
[2026-03-19 01:16:03] 2026-03-19 00:15:21,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 01:16:03] 2026-03-19 00:15:21,994 | INFO     | [job] retrieve thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:21,995 | INFO     | [job] job monitor thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:22,084 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:22,263 | INFO     | [payload] failed_post thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:22,322 | INFO     | all job control threads have been joined
[2026-03-19 01:16:03] 2026-03-19 00:15:22,338 | INFO     | [data] control thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:22,387 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:22,440 | INFO     | all payload control threads have been joined
[2026-03-19 01:16:03] 2026-03-19 00:15:22,769 | INFO     | [payload] validate_post thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:22,962 | INFO     | [job] validate thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:22,996 | INFO     | [data] copytool_out thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:23,165 | INFO     | [data] copytool_in thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:23,190 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:23,328 | INFO     | [job] control thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:23,348 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:23,445 | INFO     | [payload] control thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:23,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:16:03] 2026-03-19 00:15:24,584 | INFO     | [job] queue monitor thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:25,532 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 01:16:03] 2026-03-19 00:15:52,058 | INFO     | PID=1095 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-19 01:16:03] 2026-03-19 00:15:52,059 | INFO     | .. there are 49 such processes running
[2026-03-19 01:16:03] 2026-03-19 00:15:52,059 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 01:16:03] 2026-03-19 00:15:52,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 01:16:03] 2026-03-19 00:15:52,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 01:16:03] 2026-03-19 00:15:57,921 | INFO     | [monitor] cgroup control has ended
[2026-03-19 01:16:03] 2026-03-19 00:15:58,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22658278037312)>', '<ExcThread(monitor, started 22657957345024)>']
[2026-03-19 01:16:03] 2026-03-19 00:15:59,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 01:16:03] 2026-03-19 00:15:59,102 | INFO     | [monitor] control thread has ended
[2026-03-19 01:16:03] 2026-03-19 00:16:03,121 | INFO     | all workflow threads have been joined
[2026-03-19 01:16:03] 2026-03-19 00:16:03,121 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 01:16:03] 2026-03-19 00:16:03,121 | INFO     | traces error code: 0
[2026-03-19 01:16:03] 2026-03-19 00:16:03,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 01:16:03] 2026-03-19 00:16:03,241 [wrapper] ==== pilot stdout END ====
[2026-03-19 01:16:03] 2026-03-19 00:16:03,243 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 01:16:03] 2026-03-19 00:16:03,246 [wrapper] pilotpid: 1095
[2026-03-19 01:16:03] 2026-03-19 00:16:03,248 [wrapper] Pilot exit status: 0
[2026-03-19 01:16:03] 2026-03-19 00:16:03,258 [wrapper] pandaids: 7056948658
[2026-03-19 01:16:03] 2026-03-19 00:16:03,392 [wrapper] cleanup supervisor_pilot  789507 1101
[2026-03-19 01:16:03] 2026-03-19 00:16:03,395 [wrapper] Test setup, not cleaning
[2026-03-19 01:16:03] 2026-03-19 00:16:03,397 [wrapper] apfmon messages muted
[2026-03-19 01:16:03] 2026-03-19 00:16:03,399 [wrapper] ==== wrapper stdout END ====
[2026-03-19 01:16:03] 2026-03-19 00:16:03,401 [wrapper] ==== wrapper stderr END ====
[2026-03-19 01:16:03]  *** Error codes and diagnostics ***
[2026-03-19 01:16:03]     "exeErrorCode": 0,
[2026-03-19 01:16:03]     "exeErrorDiag": "",
[2026-03-19 01:16:03]     "pilotErrorCode": 0,
[2026-03-19 01:16:03]     "pilotErrorDiag": "",
[2026-03-19 01:16:03]  *** Listing of results directory ***
[2026-03-19 01:16:03] total 469892
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-19 01:16:03] -rwx------. 1 boinc boinc     36322 Mar 16 16:06 runpilot2-wrapper.sh
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:09 queuedata.json
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc       100 Mar 18 22:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 01:16:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 22:02 run_atlas
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc       105 Mar 18 22:02 job.xml
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc      6709 Mar 18 22:02 init_data.xml
[2026-03-19 01:16:03] -rw-r--r--. 2 boinc boinc 241977684 Mar 18 22:02 EVNT.49130588._000010.pool.root.1
[2026-03-19 01:16:03] -rw-r--r--. 2 boinc boinc     15845 Mar 18 22:02 start_atlas.sh
[2026-03-19 01:16:03] drwxrwx--x. 2 boinc boinc      4096 Mar 18 22:02 shared
[2026-03-19 01:16:03] -rw-r--r--. 2 boinc boinc    597563 Mar 18 22:02 input.tar.gz
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc         0 Mar 18 22:02 boinc_lockfile
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc      2698 Mar 18 22:02 pandaJob.out
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc   1010358 Mar 18 22:02 agis_schedconf.cvmfs.json
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc       445 Mar 18 22:02 workernode_map.json
[2026-03-19 01:16:03] drwx------. 5 boinc boinc      4096 Mar 18 22:02 pilot3
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc       531 Mar 19 01:14 boinc_task_state.xml
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc 231278073 Mar 19 01:14 HITS.49179087._000238.pool.root.1
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc      1027 Mar 19 01:15 memory_monitor_summary.json
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc   1511579 Mar 19 01:15 agis_ddmendpoints.agis.ALL.json
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc    367411 Mar 19 01:15 log.49179087._000238.job.log.tgz.1
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc      6349 Mar 19 01:15 heartbeat.json
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc        95 Mar 19 01:15 pilot_heartbeat.json
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc      8192 Mar 19 01:16 boinc_mmap_file
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc        28 Mar 19 01:16 wrapper_checkpoint.txt
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc      4827 Mar 19 01:16 pilotlog.txt
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc   1617179 Mar 19 01:16 log.49179087._000238.job.log.1
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc       357 Mar 19 01:16 output.list
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc       620 Mar 19 01:16 runtime_log
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc   2007040 Mar 19 01:16 result.tar.gz
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc      9222 Mar 19 01:16 runtime_log.err
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc       665 Mar 19 01:16 TJvMDm9hOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxduLDmi6Uusn.diag
[2026-03-19 01:16:03] -rw-r--r--. 1 boinc boinc     21095 Mar 19 01:16 stderr.txt
[2026-03-19 01:16:03] HITS file was successfully produced:
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc 231278073 Mar 19 01:14 shared/HITS.pool.root.1
[2026-03-19 01:16:03]  *** Contents of shared directory: ***
[2026-03-19 01:16:03] total 464736
[2026-03-19 01:16:03] -rw-r--r--. 2 boinc boinc 241977684 Mar 18 22:02 ATLAS.root_0
[2026-03-19 01:16:03] -rw-r--r--. 2 boinc boinc     15845 Mar 18 22:02 start_atlas.sh
[2026-03-19 01:16:03] -rw-r--r--. 2 boinc boinc    597563 Mar 18 22:02 input.tar.gz
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc 231278073 Mar 19 01:14 HITS.pool.root.1
[2026-03-19 01:16:03] -rw-------. 1 boinc boinc   2007040 Mar 19 01:16 result.tar.gz
01:16:04 (4189561): run_atlas exited; CPU time 44425.025165
01:16:04 (4189561): called boinc_finish(0)

</stderr_txt>
]]>

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