Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:22:18 (3489359): wrapper (7.7.26015): starting
02:22:18 (3489359): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 02:22:18] Arguments: --nthreads 4
[2026-03-19 02:22:18] Threads: 4
[2026-03-19 02:22:18] Checking for CVMFS
[2026-03-19 02:22:18] No cvmfs_config command found, will try listing directly
[2026-03-19 02:22:18] CVMFS is ok
[2026-03-19 02:22:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:22:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:22:18] Further information can be found at the LHC@home message board.
[2026-03-19 02:22:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:22:18] Checking for apptainer binary...
[2026-03-19 02:22:18] which: no apptainer in ((null))
[2026-03-19 02:22:18] apptainer is not installed, using version from CVMFS
[2026-03-19 02:22:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:22:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-19 02:22:18] apptainer works
[2026-03-19 02:22:18] Set ATHENA_PROC_NUMBER=4
[2026-03-19 02:22:18] Set ATHENA_CORE_NUMBER=4
[2026-03-19 02:22:18] Starting ATLAS job with PandaID=7056945144
[2026-03-19 02:22:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 06:03:58]  *** The last 200 lines of the pilot log: ***
[2026-03-19 06:03:58] 2026-03-19 05:03:09,118 | INFO     | extracted standard info from prmon json
[2026-03-19 06:03:58] 2026-03-19 05:03:09,118 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 06:03:58] 2026-03-19 05:03:09,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 06:03:58] 2026-03-19 05:03:09,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 06:03:58] 2026-03-19 05:03:09,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 06:03:58] 2026-03-19 05:03:09,121 | INFO     | fitting pss+swap vs Time
[2026-03-19 06:03:58] 2026-03-19 05:03:09,121 | INFO     | sum of square deviations: 3168461268.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,122 | INFO     | sum of deviations: 22315017316.000004
[2026-03-19 06:03:58] 2026-03-19 05:03:09,122 | INFO     | mean x: 1773889962.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,122 | INFO     | mean y: 2331358.7465437786
[2026-03-19 06:03:58] 2026-03-19 05:03:09,122 | INFO     | intersect: -12490920687.125896
[2026-03-19 06:03:58] 2026-03-19 05:03:09,122 | INFO     | chi2: 1.0883429530481534
[2026-03-19 06:03:58] 2026-03-19 05:03:09,122 | INFO     | sum of square deviations: 2954447953.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,123 | INFO     | sum of deviations: 21669337501.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,123 | INFO     | mean x: 1773889809.5
[2026-03-19 06:03:58] 2026-03-19 05:03:09,123 | INFO     | mean y: 2330898.5943396227
[2026-03-19 06:03:58] 2026-03-19 05:03:09,123 | INFO     | intersect: -13008227277.801498
[2026-03-19 06:03:58] 2026-03-19 05:03:09,123 | INFO     | chi2: 1.0888052780413853
[2026-03-19 06:03:58] 2026-03-19 05:03:09,124 | INFO     | current chi2=1.0888052780413853 (change=-0.04247971578600267 %)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,124 | INFO     | right removable region: 211
[2026-03-19 06:03:58] 2026-03-19 05:03:09,124 | INFO     | sum of square deviations: 2954447953.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,124 | INFO     | sum of deviations: 871646903.5000001
[2026-03-19 06:03:58] 2026-03-19 05:03:09,124 | INFO     | mean x: 1773890114.5
[2026-03-19 06:03:58] 2026-03-19 05:03:09,124 | INFO     | mean y: 2346422.1933962265
[2026-03-19 06:03:58] 2026-03-19 05:03:09,125 | INFO     | intersect: -521002051.04105026
[2026-03-19 06:03:58] 2026-03-19 05:03:09,125 | INFO     | chi2: 0.0011616743402395914
[2026-03-19 06:03:58] 2026-03-19 05:03:09,125 | INFO     | current chi2=0.0011616743402395914 (change=99.89326210667456 %)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,125 | INFO     | sum of square deviations: 2750295288.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | sum of deviations: 422313003.9999996
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | mean x: 1773890267.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | mean y: 2346754.5990338163
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | intersect: -270037425.63490015
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | chi2: 0.000903901494770728
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | current chi2=0.000903901494770728 (change=22.189768383426514 %)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | left removable region: 20
[2026-03-19 06:03:58] 2026-03-19 05:03:09,126 | INFO     | sum of square deviations: 2160561440.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | sum of deviations: 362483777.0000003
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | mean x: 1773890389.0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | mean y: 2346550.455497382
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | intersect: -295264281.7496353
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | chi2: 0.0008703858736031139
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | current memory leak: 0.17 B/s (using 191 data points, chi2=0.00)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | could have reported an average CPU frequency of 3580 MHz (11 samples)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | ..............................
[2026-03-19 06:03:58] 2026-03-19 05:03:09,127 | INFO     | . Timing measurements:
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | . get job = 0 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | . initial setup = 4 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | . payload setup = 7 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | . stage-in = 0 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | . payload execution = 13212 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | . stage-out = 0 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | . log creation = 0 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,128 | INFO     | ..............................
[2026-03-19 06:03:58] 2026-03-19 05:03:09,301 | INFO     | time since job start (13238s) is within the limit (345600.0s)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,393 | INFO     | 
[2026-03-19 06:03:58] 2026-03-19 05:03:09,393 | INFO     | job summary report
[2026-03-19 06:03:58] 2026-03-19 05:03:09,393 | INFO     | --------------------------------------------------
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | PanDA job id: 7056945144
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | task id: 49178954
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | errors: (none)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | pilot state: finished 
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | transexitcode: 0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | exeerrorcode: 0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | exeerrordiag: 
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | exitcode: 0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | exitmsg: OK
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | cpuconsumptiontime: 51108 s
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | nevents: 400
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | neventsw: 0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | pid: 3500170
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | pgrp: 3500170
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | corecount: 4
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | event service: False
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | sizes: {0: 2280326, 11: 2280326, 13222: 2310595, 13223: 2310594, 13224: 2319672, 13226: 2319728, 13227: 2320050}
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | --------------------------------------------------
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | 
[2026-03-19 06:03:58] 2026-03-19 05:03:09,394 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-19 06:03:58] 2026-03-19 05:03:09,412 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,412 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,412 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,412 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | job 7056945144 has completed (purged errors)
[2026-03-19 06:03:58] 2026-03-19 05:03:09,413 | INFO     | overall cleanup function is called
[2026-03-19 06:03:58] 2026-03-19 05:03:10,420 | INFO     | --- collectZombieJob: --- 10, [3500170]
[2026-03-19 06:03:58] 2026-03-19 05:03:10,421 | INFO     | zombie collector waiting for pid 3500170
[2026-03-19 06:03:58] 2026-03-19 05:03:10,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 06:03:58] 2026-03-19 05:03:10,421 | INFO     | collected zombie processes
[2026-03-19 06:03:58] 2026-03-19 05:03:10,421 | INFO     | will attempt to kill all subprocesses of pid=3500170
[2026-03-19 06:03:58] 2026-03-19 05:03:10,923 | INFO     | process IDs to be killed: [3500170] (in reverse order)
[2026-03-19 06:03:58] 2026-03-19 05:03:11,167 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 06:03:58] 2026-03-19 05:03:11,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 06:03:58] 2026-03-19 05:03:11,235 | INFO     | did not find any defunct processes belonging to 3500170
[2026-03-19 06:03:58] 2026-03-19 05:03:11,297 | INFO     | did not find any defunct processes belonging to 3500170
[2026-03-19 06:03:58] 2026-03-19 05:03:11,297 | INFO     | ready for new job
[2026-03-19 06:03:58] 2026-03-19 05:03:11,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 06:03:58] 2026-03-19 05:03:11,299 | INFO     | **************************************
[2026-03-19 06:03:58] 2026-03-19 05:03:11,299 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 06:03:58] 2026-03-19 05:03:11,299 | INFO     | **************************************
[2026-03-19 06:03:58] 2026-03-19 05:03:11,299 | INFO     | 
[2026-03-19 06:03:58] 2026-03-19 05:03:11,309 | INFO     | architecture information:
[2026-03-19 06:03:58] 2026-03-19 05:03:11,313 | INFO     | executing command: cat /etc/os-release
[2026-03-19 06:03:58] 2026-03-19 05:03:11,330 | INFO     | cat /etc/os-release:
[2026-03-19 06:03:58] NAME="CentOS Linux"
[2026-03-19 06:03:58] VERSION="7 (Core)"
[2026-03-19 06:03:58] ID="centos"
[2026-03-19 06:03:58] ID_LIKE="rhel fedora"
[2026-03-19 06:03:58] VERSION_ID="7"
[2026-03-19 06:03:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 06:03:58] ANSI_COLOR="0;31"
[2026-03-19 06:03:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 06:03:58] HOME_URL="https://www.centos.org/"
[2026-03-19 06:03:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 06:03:58] 
[2026-03-19 06:03:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 06:03:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 06:03:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 06:03:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 06:03:58] 
[2026-03-19 06:03:58] 2026-03-19 05:03:11,330 | INFO     | **************************************
[2026-03-19 06:03:58] 2026-03-19 05:03:11,562 | WARNING  | process 3500170 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 06:03:58] 2026-03-19 05:03:11,833 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-19 06:03:58] 2026-03-19 05:03:11,848 | INFO     | sufficient remaining disk space (41144025088 B)
[2026-03-19 06:03:58] 2026-03-19 05:03:11,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 06:03:58] 2026-03-19 05:03:11,848 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 06:03:58] 2026-03-19 05:03:11,848 | INFO     | update_server=False
[2026-03-19 06:03:58] 2026-03-19 05:03:11,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 06:03:58] 2026-03-19 05:03:11,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 06:03:58] 2026-03-19 05:03:11,903 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 06:03:58] 2026-03-19 05:03:11,904 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7056945144/payload.stdout) since it has not been created yet
[2026-03-19 06:03:58] 2026-03-19 05:03:11,904 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-19 06:03:58] 2026-03-19 05:03:11,917 | INFO     | sufficient remaining disk space (41144025088 B)
[2026-03-19 06:03:58] 2026-03-19 05:03:11,917 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-19 06:03:58] 2026-03-19 05:03:11,918 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7056945144/HITS.49178954._000067.pool.root.1 since it does not exist
[2026-03-19 06:03:58] 2026-03-19 05:03:12,347 | INFO     | all data control threads have been joined
[2026-03-19 06:03:58] 2026-03-19 05:03:12,353 | INFO     | all job control threads have been joined
[2026-03-19 06:03:58] 2026-03-19 05:03:12,419 | INFO     | number of running child processes to parent process 3500170: 1
[2026-03-19 06:03:58] 2026-03-19 05:03:12,419 | INFO     | maximum number of monitored processes: 6
[2026-03-19 06:03:58] 2026-03-19 05:03:12,419 | INFO     | aborting job monitoring since job object (job id=7056945144) has expired
[2026-03-19 06:03:58] 2026-03-19 05:03:12,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:03:58] 2026-03-19 05:03:12,420 | INFO     | will abort loop
[2026-03-19 06:03:58] 2026-03-19 05:03:12,853 | INFO     | [job] retrieve thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:12,972 | INFO     | [job] validate thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,056 | INFO     | all payload control threads have been joined
[2026-03-19 06:03:58] 2026-03-19 05:03:13,209 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,213 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,254 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,352 | INFO     | [data] control thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,358 | INFO     | [job] control thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,395 | INFO     | [payload] failed_post thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,424 | INFO     | [job] job monitor thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,468 | INFO     | [data] copytool_in thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,854 | INFO     | [data] copytool_out thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:13,964 | INFO     | [payload] validate_post thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:14,061 | INFO     | [payload] control thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:14,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:03:58] 2026-03-19 05:03:14,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 06:03:58] 2026-03-19 05:03:15,190 | INFO     | [job] queue monitor thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:18,609 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:21,989 | INFO     | job.realtimelogging is not enabled
[2026-03-19 06:03:58] 2026-03-19 05:03:22,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 06:03:58] 2026-03-19 05:03:42,980 | INFO     | PID=3494311 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 06:03:58] 2026-03-19 05:03:42,980 | INFO     | .. there are 37 such processes running
[2026-03-19 06:03:58] 2026-03-19 05:03:42,981 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 06:03:58] 2026-03-19 05:03:42,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 06:03:58] 2026-03-19 05:03:42,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 06:03:58] 2026-03-19 05:03:52,887 | INFO     | [monitor] cgroup control has ended
[2026-03-19 06:03:58] 2026-03-19 05:03:53,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23103659530048)>', '<ExcThread(monitor, started 23103418935040)>']
[2026-03-19 06:03:58] 2026-03-19 05:03:54,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 06:03:58] 2026-03-19 05:03:54,035 | INFO     | [monitor] control thread has ended
[2026-03-19 06:03:58] 2026-03-19 05:03:58,507 | INFO     | all workflow threads have been joined
[2026-03-19 06:03:58] 2026-03-19 05:03:58,507 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 06:03:58] 2026-03-19 05:03:58,507 | INFO     | traces error code: 0
[2026-03-19 06:03:58] 2026-03-19 05:03:58,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 06:03:58] 2026-03-19 05:03:58,684 [wrapper] ==== pilot stdout END ====
[2026-03-19 06:03:58] 2026-03-19 05:03:58,686 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 06:03:58] 2026-03-19 05:03:58,689 [wrapper] pilotpid: 3494311
[2026-03-19 06:03:58] 2026-03-19 05:03:58,691 [wrapper] Pilot exit status: 0
[2026-03-19 06:03:58] 2026-03-19 05:03:58,699 [wrapper] pandaids: 7056945144
[2026-03-19 06:03:58] 2026-03-19 05:03:58,849 [wrapper] cleanup supervisor_pilot  216922 3494312
[2026-03-19 06:03:58] 2026-03-19 05:03:58,854 [wrapper] Test setup, not cleaning
[2026-03-19 06:03:58] 2026-03-19 05:03:58,857 [wrapper] apfmon messages muted
[2026-03-19 06:03:58] 2026-03-19 05:03:58,859 [wrapper] ==== wrapper stdout END ====
[2026-03-19 06:03:58] 2026-03-19 05:03:58,861 [wrapper] ==== wrapper stderr END ====
[2026-03-19 06:03:58]  *** Error codes and diagnostics ***
[2026-03-19 06:03:58]     "exeErrorCode": 0,
[2026-03-19 06:03:58]     "exeErrorDiag": "",
[2026-03-19 06:03:58]     "pilotErrorCode": 0,
[2026-03-19 06:03:58]     "pilotErrorDiag": "",
[2026-03-19 06:03:58]  *** Listing of results directory ***
[2026-03-19 06:03:58] total 474272
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-19 06:03:58] -rwx------. 1 boinc boinc     36322 Mar 16 16:06 runpilot2-wrapper.sh
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:09 queuedata.json
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc       100 Mar 19 02:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 06:03:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 02:22 run_atlas
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc       105 Mar 19 02:22 job.xml
[2026-03-19 06:03:58] -rw-r--r--. 2 boinc boinc 236271755 Mar 19 02:22 EVNT.49130187._000003.pool.root.1
[2026-03-19 06:03:58] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:22 start_atlas.sh
[2026-03-19 06:03:58] drwxrwx--x. 2 boinc boinc      4096 Mar 19 02:22 shared
[2026-03-19 06:03:58] -rw-r--r--. 2 boinc boinc    597541 Mar 19 02:22 input.tar.gz
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc      6708 Mar 19 02:22 init_data.xml
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc         0 Mar 19 02:22 boinc_lockfile
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc      2623 Mar 19 02:22 pandaJob.out
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc   1010446 Mar 19 02:22 agis_schedconf.cvmfs.json
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc       444 Mar 19 02:22 workernode_map.json
[2026-03-19 06:03:58] drwx------. 5 boinc boinc      4096 Mar 19 02:22 pilot3
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc       529 Mar 19 06:02 boinc_task_state.xml
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc 240951167 Mar 19 06:02 HITS.49178954._000067.pool.root.1
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc      1028 Mar 19 06:03 memory_monitor_summary.json
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc   1511579 Mar 19 06:03 agis_ddmendpoints.agis.ALL.json
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc    392504 Mar 19 06:03 log.49178954._000067.job.log.tgz.1
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc        95 Mar 19 06:03 pilot_heartbeat.json
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc      6345 Mar 19 06:03 heartbeat.json
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc      8192 Mar 19 06:03 boinc_mmap_file
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc        27 Mar 19 06:03 wrapper_checkpoint.txt
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc      6112 Mar 19 06:03 pilotlog.txt
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc   1853455 Mar 19 06:03 log.49178954._000067.job.log.1
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc       357 Mar 19 06:03 output.list
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc       620 Mar 19 06:03 runtime_log
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc   2263040 Mar 19 06:03 result.tar.gz
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc      9222 Mar 19 06:03 runtime_log.err
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc       665 Mar 19 06:03 ZYTKDm1hOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXcuLDmgS9eNn.diag
[2026-03-19 06:03:58] -rw-r--r--. 1 boinc boinc     21249 Mar 19 06:03 stderr.txt
[2026-03-19 06:03:58] HITS file was successfully produced:
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc 240951167 Mar 19 06:02 shared/HITS.pool.root.1
[2026-03-19 06:03:58]  *** Contents of shared directory: ***
[2026-03-19 06:03:58] total 468860
[2026-03-19 06:03:58] -rw-r--r--. 2 boinc boinc 236271755 Mar 19 02:22 ATLAS.root_0
[2026-03-19 06:03:58] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:22 start_atlas.sh
[2026-03-19 06:03:58] -rw-r--r--. 2 boinc boinc    597541 Mar 19 02:22 input.tar.gz
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc 240951167 Mar 19 06:02 HITS.pool.root.1
[2026-03-19 06:03:58] -rw-------. 1 boinc boinc   2263040 Mar 19 06:03 result.tar.gz
06:13:35 (3489359): run_atlas exited; CPU time 51776.525146
06:13:35 (3489359): called boinc_finish(0)

</stderr_txt>
]]>

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