Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:58:05 (2082339): wrapper (7.7.26015): starting
13:58:05 (2082339): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 13:58:05] Arguments: --nthreads 4
[2026-03-18 13:58:05] Threads: 4
[2026-03-18 13:58:05] Checking for CVMFS
[2026-03-18 13:58:05] No cvmfs_config command found, will try listing directly
[2026-03-18 13:58:05] CVMFS is ok
[2026-03-18 13:58:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 13:58:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 13:58:05] Further information can be found at the LHC@home message board.
[2026-03-18 13:58:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 13:58:05] Checking for apptainer binary...
[2026-03-18 13:58:05] which: no apptainer in ((null))
[2026-03-18 13:58:05] apptainer is not installed, using version from CVMFS
[2026-03-18 13:58:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 13:58:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-18 13:58:05] apptainer works
[2026-03-18 13:58:05] Set ATHENA_PROC_NUMBER=4
[2026-03-18 13:58:05] Set ATHENA_CORE_NUMBER=4
[2026-03-18 13:58:05] Starting ATLAS job with PandaID=7056914394
[2026-03-18 13:58:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:15:02 (2681418): wrapper (7.7.26015): starting
16:15:02 (2681418): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 16:15:02] Arguments: --nthreads 4
[2026-03-18 16:15:02] Threads: 4
[2026-03-18 16:15:02] This job has been restarted, cleaning up previous attempt
[2026-03-18 16:15:02] Checking for CVMFS
[2026-03-18 16:15:02] No cvmfs_config command found, will try listing directly
[2026-03-18 16:15:02] CVMFS is ok
[2026-03-18 16:15:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 16:15:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 16:15:02] Further information can be found at the LHC@home message board.
[2026-03-18 16:15:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 16:15:02] Checking for apptainer binary...
[2026-03-18 16:15:02] which: no apptainer in ((null))
[2026-03-18 16:15:02] apptainer is not installed, using version from CVMFS
[2026-03-18 16:15:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 16:15:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-18 16:15:02] apptainer works
[2026-03-18 16:15:02] Set ATHENA_PROC_NUMBER=4
[2026-03-18 16:15:02] Set ATHENA_CORE_NUMBER=4
[2026-03-18 16:15:02] Starting ATLAS job with PandaID=7056914394
[2026-03-18 16:15:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 19:31:37]  *** The last 200 lines of the pilot log: ***
[2026-03-18 19:31:37] 2026-03-18 18:30:41,457 | INFO     | total number of processed events: 400 (read)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,475 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/PanDA_Pilot-7056914394/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,475 | INFO     | extracted standard info from prmon json
[2026-03-18 19:31:37] 2026-03-18 18:30:41,475 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 19:31:37] 2026-03-18 18:30:41,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 19:31:37] 2026-03-18 18:30:41,476 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 19:31:37] 2026-03-18 18:30:41,476 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 19:31:37] 2026-03-18 18:30:41,478 | INFO     | fitting pss+swap vs Time
[2026-03-18 19:31:37] 2026-03-18 18:30:41,478 | INFO     | sum of square deviations: 2194675568.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,479 | INFO     | sum of deviations: 23428985072.5
[2026-03-18 19:31:37] 2026-03-18 18:30:41,479 | INFO     | mean x: 1773852761.5
[2026-03-18 19:31:37] 2026-03-18 18:30:41,479 | INFO     | mean y: 2318713.6614583335
[2026-03-18 19:31:37] 2026-03-18 18:30:41,479 | INFO     | intersect: -18934225017.888573
[2026-03-18 19:31:37] 2026-03-18 18:30:41,479 | INFO     | chi2: 1.0979544887117152
[2026-03-18 19:31:37] 2026-03-18 18:30:41,479 | INFO     | sum of square deviations: 2027639878.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | sum of deviations: 22567690600.999996
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | mean x: 1773852609.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | mean y: 2317927.139037433
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | intersect: -19740713015.404213
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | chi2: 1.0985050810837544
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | current chi2=1.0985050810837544 (change=-0.05014710333624909 %)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | right removable region: 186
[2026-03-18 19:31:37] 2026-03-18 18:30:41,480 | INFO     | sum of square deviations: 2027639878.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,481 | INFO     | sum of deviations: 3998925576.9999995
[2026-03-18 19:31:37] 2026-03-18 18:30:41,481 | INFO     | mean x: 1773852914.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,481 | INFO     | mean y: 2336178.203208556
[2026-03-18 19:31:37] 2026-03-18 18:30:41,481 | INFO     | intersect: -3496068969.8684454
[2026-03-18 19:31:37] 2026-03-18 18:30:41,481 | INFO     | chi2: 0.0008973163659196497
[2026-03-18 19:31:37] 2026-03-18 18:30:41,481 | INFO     | current chi2=0.0008973163659196497 (change=99.91827381051354 %)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,481 | INFO     | sum of square deviations: 1869302025.5
[2026-03-18 19:31:37] 2026-03-18 18:30:41,482 | INFO     | sum of deviations: 3229313770.0000005
[2026-03-18 19:31:37] 2026-03-18 18:30:41,482 | INFO     | mean x: 1773853066.5
[2026-03-18 19:31:37] 2026-03-18 18:30:41,482 | INFO     | mean y: 2336915.10989011
[2026-03-18 19:31:37] 2026-03-18 18:30:41,482 | INFO     | intersect: -3062083951.8567343
[2026-03-18 19:31:37] 2026-03-18 18:30:41,482 | INFO     | chi2: 0.0005238948572110962
[2026-03-18 19:31:37] 2026-03-18 18:30:41,482 | INFO     | current chi2=0.0005238948572110962 (change=41.61536810106411 %)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,482 | INFO     | sum of square deviations: 1719429448.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | sum of deviations: 3042518228.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | mean x: 1773853219.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | mean y: 2337103.118644068
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | intersect: -3136483602.1342626
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | chi2: 0.0004941706675051481
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | current chi2=0.0004941706675051481 (change=5.673693737743854 %)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | left removable region: 30
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | sum of square deviations: 1177156955.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | sum of deviations: 1535023215.0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,483 | INFO     | mean x: 1773853493.5
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | mean y: 2338104.346153846
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | intersect: -2310782742.4243193
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | chi2: 0.0001296094188835455
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | current memory leak: 1.30 B/s (using 156 data points, chi2=0.00)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | could have reported an average CPU frequency of 3572 MHz (10 samples)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | ..............................
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . Timing measurements:
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . get job = 0 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . initial setup = 0 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . payload setup = 8 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . stage-in = 0 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . payload execution = 11703 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . stage-out = 0 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | . log creation = 0 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,484 | INFO     | ..............................
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | 
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | job summary report
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | --------------------------------------------------
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | PanDA job id: 7056914394
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | task id: 49177101
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | errors: (none)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | pilot state: finished 
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | transexitcode: 0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | exeerrorcode: 0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | exeerrordiag: 
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | exitcode: 0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | exitmsg: OK
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | cpuconsumptiontime: 45443 s
[2026-03-18 19:31:37] 2026-03-18 18:30:41,533 | INFO     | nevents: 400
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | neventsw: 0
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | pid: 2704957
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | pgrp: 2704957
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | corecount: 4
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | event service: False
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | sizes: {0: 2279883, 1: 2280344, 11: 2280344, 11715: 2309780, 11716: 2309779, 11717: 2319041, 11719: 2319179}
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | --------------------------------------------------
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | 
[2026-03-18 19:31:37] 2026-03-18 18:30:41,534 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/1
[2026-03-18 19:31:37] 2026-03-18 18:30:41,552 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 19:31:37] 2026-03-18 18:30:41,553 | INFO     | job 7056914394 has completed (purged errors)
[2026-03-18 19:31:37] 2026-03-18 18:30:41,554 | INFO     | overall cleanup function is called
[2026-03-18 19:31:37] 2026-03-18 18:30:42,560 | INFO     | --- collectZombieJob: --- 10, [2704957]
[2026-03-18 19:31:37] 2026-03-18 18:30:42,560 | INFO     | zombie collector waiting for pid 2704957
[2026-03-18 19:31:37] 2026-03-18 18:30:42,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 19:31:37] 2026-03-18 18:30:42,560 | INFO     | collected zombie processes
[2026-03-18 19:31:37] 2026-03-18 18:30:42,560 | INFO     | will attempt to kill all subprocesses of pid=2704957
[2026-03-18 19:31:37] 2026-03-18 18:30:43,033 | INFO     | process IDs to be killed: [2704957] (in reverse order)
[2026-03-18 19:31:37] 2026-03-18 18:30:43,270 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 19:31:37] 2026-03-18 18:30:43,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 19:31:37] 2026-03-18 18:30:43,302 | INFO     | did not find any defunct processes belonging to 2704957
[2026-03-18 19:31:37] 2026-03-18 18:30:43,333 | INFO     | did not find any defunct processes belonging to 2704957
[2026-03-18 19:31:37] 2026-03-18 18:30:43,334 | INFO     | ready for new job
[2026-03-18 19:31:37] 2026-03-18 18:30:43,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 19:31:37] 2026-03-18 18:30:43,335 | INFO     | **************************************
[2026-03-18 19:31:37] 2026-03-18 18:30:43,335 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 19:31:37] 2026-03-18 18:30:43,335 | INFO     | **************************************
[2026-03-18 19:31:37] 2026-03-18 18:30:43,335 | INFO     | 
[2026-03-18 19:31:37] 2026-03-18 18:30:43,341 | INFO     | architecture information:
[2026-03-18 19:31:37] 2026-03-18 18:30:43,341 | INFO     | executing command: cat /etc/os-release
[2026-03-18 19:31:37] 2026-03-18 18:30:43,356 | INFO     | cat /etc/os-release:
[2026-03-18 19:31:37] NAME="CentOS Linux"
[2026-03-18 19:31:37] VERSION="7 (Core)"
[2026-03-18 19:31:37] ID="centos"
[2026-03-18 19:31:37] ID_LIKE="rhel fedora"
[2026-03-18 19:31:37] VERSION_ID="7"
[2026-03-18 19:31:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 19:31:37] ANSI_COLOR="0;31"
[2026-03-18 19:31:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 19:31:37] HOME_URL="https://www.centos.org/"
[2026-03-18 19:31:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 19:31:37] 
[2026-03-18 19:31:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 19:31:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 19:31:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 19:31:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 19:31:37] 
[2026-03-18 19:31:37] 2026-03-18 18:30:43,357 | INFO     | **************************************
[2026-03-18 19:31:37] 2026-03-18 18:30:43,860 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/1
[2026-03-18 19:31:37] 2026-03-18 18:30:43,877 | INFO     | sufficient remaining disk space (21734883328 B)
[2026-03-18 19:31:37] 2026-03-18 18:30:43,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 19:31:37] 2026-03-18 18:30:43,877 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 19:31:37] 2026-03-18 18:30:43,877 | INFO     | update_server=False
[2026-03-18 19:31:37] 2026-03-18 18:30:43,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 19:31:37] 2026-03-18 18:30:43,919 | INFO     | all payload control threads have been joined
[2026-03-18 19:31:37] 2026-03-18 18:30:44,012 | INFO     | all data control threads have been joined
[2026-03-18 19:31:37] 2026-03-18 18:30:44,230 | INFO     | all job control threads have been joined
[2026-03-18 19:31:37] 2026-03-18 18:30:44,268 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 19:31:37] 2026-03-18 18:30:44,268 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 19:31:37] 2026-03-18 18:30:44,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 19:31:37] 2026-03-18 18:30:44,268 | INFO     | will abort loop
[2026-03-18 19:31:37] 2026-03-18 18:30:44,882 | INFO     | [job] retrieve thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:44,924 | INFO     | [payload] control thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,003 | INFO     | [job] validate thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,017 | INFO     | [data] control thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 19:31:37] 2026-03-18 18:30:45,235 | INFO     | [job] control thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,273 | INFO     | [job] job monitor thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,312 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,399 | INFO     | [payload] failed_post thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,431 | INFO     | [data] copytool_in thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,526 | INFO     | [payload] validate_post thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,593 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:45,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 19:31:37] 2026-03-18 18:30:46,196 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:46,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 19:31:37] 2026-03-18 18:30:47,185 | INFO     | [data] copytool_out thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:47,550 | INFO     | [job] queue monitor thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:49,736 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:30:54,066 | INFO     | job.realtimelogging is not enabled
[2026-03-18 19:31:37] 2026-03-18 18:30:55,071 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 19:31:37] 2026-03-18 18:31:14,309 | INFO     | PID=2686049 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 19:31:37] 2026-03-18 18:31:14,310 | INFO     | .. there are 46 such processes running
[2026-03-18 19:31:37] 2026-03-18 18:31:14,313 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 19:31:37] 2026-03-18 18:31:14,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 19:31:37] 2026-03-18 18:31:14,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 19:31:37] 2026-03-18 18:31:30,547 | INFO     | [monitor] cgroup control has ended
[2026-03-18 19:31:37] 2026-03-18 18:31:32,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23375855011648)>', '<ExcThread(monitor, started 23375618787072)>']
[2026-03-18 19:31:37] 2026-03-18 18:31:32,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 19:31:37] 2026-03-18 18:31:32,403 | INFO     | [monitor] control thread has ended
[2026-03-18 19:31:37] 2026-03-18 18:31:37,166 | INFO     | all workflow threads have been joined
[2026-03-18 19:31:37] 2026-03-18 18:31:37,166 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 19:31:37] 2026-03-18 18:31:37,166 | INFO     | traces error code: 0
[2026-03-18 19:31:37] 2026-03-18 18:31:37,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 19:31:37] 2026-03-18 18:31:37,293 [wrapper] ==== pilot stdout END ====
[2026-03-18 19:31:37] 2026-03-18 18:31:37,296 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 19:31:37] 2026-03-18 18:31:37,298 [wrapper] pilotpid: 2686049
[2026-03-18 19:31:37] 2026-03-18 18:31:37,300 [wrapper] Pilot exit status: 0
[2026-03-18 19:31:37] 2026-03-18 18:31:37,309 [wrapper] pandaids: 7056914394 7056914394
[2026-03-18 19:31:37] 2026-03-18 18:31:37,444 [wrapper] cleanup supervisor_pilot 3708754 2686051
[2026-03-18 19:31:37] 2026-03-18 18:31:37,446 [wrapper] Test setup, not cleaning
[2026-03-18 19:31:37] 2026-03-18 18:31:37,448 [wrapper] apfmon messages muted
[2026-03-18 19:31:37] 2026-03-18 18:31:37,451 [wrapper] ==== wrapper stdout END ====
[2026-03-18 19:31:37] 2026-03-18 18:31:37,453 [wrapper] ==== wrapper stderr END ====
[2026-03-18 19:31:37]  *** Error codes and diagnostics ***
[2026-03-18 19:31:37]     "exeErrorCode": 0,
[2026-03-18 19:31:37]     "exeErrorDiag": "",
[2026-03-18 19:31:37]     "pilotErrorCode": 0,
[2026-03-18 19:31:37]     "pilotErrorDiag": "",
[2026-03-18 19:31:37]  *** Listing of results directory ***
[2026-03-18 19:31:37] total 683820
[2026-03-18 19:31:37] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 19:31:37] -rwx------. 1 boinc boinc     36322 Mar 16 14:32 runpilot2-wrapper.sh
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc       100 Mar 18 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 19:31:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 13:57 run_atlas
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc       105 Mar 18 13:57 job.xml
[2026-03-18 19:31:37] -rw-r--r--. 3 boinc boinc 232326753 Mar 18 13:58 EVNT.49136460._000004.pool.root.1
[2026-03-18 19:31:37] -rw-r--r--. 3 boinc boinc 232326753 Mar 18 13:58 ATLAS.root_0
[2026-03-18 19:31:37] -rw-r--r--. 2 boinc boinc     15845 Mar 18 13:58 start_atlas.sh
[2026-03-18 19:31:37] drwxrwx--x. 2 boinc boinc      4096 Mar 18 13:58 shared
[2026-03-18 19:31:37] -rw-r--r--. 2 boinc boinc    596142 Mar 18 13:58 input.tar.gz
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc         0 Mar 18 13:58 boinc_lockfile
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc      6715 Mar 18 16:15 init_data.xml
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc      2615 Mar 18 16:15 pandaJob.out
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc      5111 Mar 18 16:15 queuedata.json
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc   1011294 Mar 18 16:15 agis_schedconf.cvmfs.json
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc       445 Mar 18 16:15 workernode_map.json
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc       529 Mar 18 19:30 boinc_task_state.xml
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc 227588638 Mar 18 19:30 HITS.49177101._000092.pool.root.1
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc      1032 Mar 18 19:30 memory_monitor_summary.json
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc   1511579 Mar 18 19:30 agis_ddmendpoints.agis.ALL.json
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc    371522 Mar 18 19:30 log.49177101._000092.job.log.tgz.1
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc      6348 Mar 18 19:30 heartbeat.json
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc        27 Mar 18 19:31 wrapper_checkpoint.txt
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc      8192 Mar 18 19:31 boinc_mmap_file
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc        96 Mar 18 19:31 pilot_heartbeat.json
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc      5088 Mar 18 19:31 pilotlog.txt
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc   1648960 Mar 18 19:31 log.49177101._000092.job.log.1
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc       357 Mar 18 19:31 output.list
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc       620 Mar 18 19:31 runtime_log
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc   2037760 Mar 18 19:31 result.tar.gz
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc      9299 Mar 18 19:31 runtime_log.err
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc       790 Mar 18 19:31 5dMNDmMENM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmT8wLDmBraURn.diag
[2026-03-18 19:31:37] -rw-r--r--. 1 boinc boinc     22769 Mar 18 19:31 stderr.txt
[2026-03-18 19:31:37] HITS file was successfully produced:
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc 227588638 Mar 18 19:30 shared/HITS.pool.root.1
[2026-03-18 19:31:37]  *** Contents of shared directory: ***
[2026-03-18 19:31:37] total 451740
[2026-03-18 19:31:37] -rw-r--r--. 3 boinc boinc 232326753 Mar 18 13:58 ATLAS.root_0
[2026-03-18 19:31:37] -rw-r--r--. 2 boinc boinc     15845 Mar 18 13:58 start_atlas.sh
[2026-03-18 19:31:37] -rw-r--r--. 2 boinc boinc    596142 Mar 18 13:58 input.tar.gz
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc 227588638 Mar 18 19:30 HITS.pool.root.1
[2026-03-18 19:31:37] -rw-------. 1 boinc boinc   2037760 Mar 18 19:31 result.tar.gz
19:31:39 (2681418): run_atlas exited; CPU time 46006.700837
19:31:39 (2681418): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN