Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:16:01 (9421): wrapper (7.7.26015): starting
17:16:01 (9421): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 17:16:01] Arguments: --nthreads 8
[2026-03-16 17:16:01] Threads: 8
[2026-03-16 17:16:01] Checking for CVMFS
[2026-03-16 17:16:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 17:16:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 17:16:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 17:16:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 17:16:02] 2.11.2.0 14544 130682 141088 157351 2 250 21081117 25165824 4101 130560 161 35089314 99.819 27363660 872 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-16 17:16:02] CVMFS is ok
[2026-03-16 17:16:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 17:16:02] Checking for apptainer binary...
[2026-03-16 17:16:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 17:16:02] Running /usr/bin/apptainer --version
[2026-03-16 17:16:02] apptainer version 1.3.2-1.el7
[2026-03-16 17:16:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 17:16:04] cg-vwn440.simple-grid.lan
[2026-03-16 17:16:04] apptainer works
[2026-03-16 17:16:04] Set ATHENA_PROC_NUMBER=8
[2026-03-16 17:16:04] Set ATHENA_CORE_NUMBER=8
[2026-03-16 17:16:04] Starting ATLAS job with PandaID=7056944928
[2026-03-16 17:16:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 05:39:59]  *** The last 200 lines of the pilot log: ***
[2026-03-17 05:39:59] 2026-03-17 04:39:07,535 | INFO     | total number of processed events: 400 (read)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,537 | INFO     | using path: /var/lib/boinc/slots/31/PanDA_Pilot-7056944928/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,538 | INFO     | extracted standard info from prmon json
[2026-03-17 05:39:59] 2026-03-17 04:39:07,538 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 05:39:59] 2026-03-17 04:39:07,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 05:39:59] 2026-03-17 04:39:07,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 05:39:59] 2026-03-17 04:39:07,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 05:39:59] 2026-03-17 04:39:07,554 | INFO     | fitting pss+swap vs Time
[2026-03-17 05:39:59] 2026-03-17 04:39:07,555 | INFO     | sum of square deviations: 119638715742.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,573 | INFO     | sum of deviations: -467902087860.49994
[2026-03-17 05:39:59] 2026-03-17 04:39:07,573 | INFO     | mean x: 1773700110.5
[2026-03-17 05:39:59] 2026-03-17 04:39:07,573 | INFO     | mean y: 2745337.701923077
[2026-03-17 05:39:59] 2026-03-17 04:39:07,573 | INFO     | intersect: 6939613389.103122
[2026-03-17 05:39:59] 2026-03-17 04:39:07,575 | INFO     | chi2: 3.415757139404661
[2026-03-17 05:39:59] 2026-03-17 04:39:07,576 | INFO     | sum of square deviations: 117190521002.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,593 | INFO     | sum of deviations: -392327016779.0001
[2026-03-17 05:39:59] 2026-03-17 04:39:07,593 | INFO     | mean x: 1773699958.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,593 | INFO     | mean y: 2750027.5062240665
[2026-03-17 05:39:59] 2026-03-17 04:39:07,593 | INFO     | intersect: 5940691144.52969
[2026-03-17 05:39:59] 2026-03-17 04:39:07,594 | INFO     | chi2: 2.5411996874567335
[2026-03-17 05:39:59] 2026-03-17 04:39:07,595 | INFO     | current chi2=2.5411996874567335 (change=25.603619234485613 %)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,596 | INFO     | sum of square deviations: 114775954799.5
[2026-03-17 05:39:59] 2026-03-17 04:39:07,617 | INFO     | sum of deviations: -368965788036.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,619 | INFO     | mean x: 1773699805.5
[2026-03-17 05:39:59] 2026-03-17 04:39:07,619 | INFO     | mean y: 2751502.9860724234
[2026-03-17 05:39:59] 2026-03-17 04:39:07,620 | INFO     | intersect: 5704595130.58932
[2026-03-17 05:39:59] 2026-03-17 04:39:07,621 | INFO     | chi2: 2.5290422965985773
[2026-03-17 05:39:59] 2026-03-17 04:39:07,621 | INFO     | current chi2=2.5290422965985773 (change=0.47841147305993637 %)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,621 | INFO     | right removable region: 717
[2026-03-17 05:39:59] 2026-03-17 04:39:07,622 | INFO     | sum of square deviations: 117190521002.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,644 | INFO     | sum of deviations: -604754150243.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,644 | INFO     | mean x: 1773700263.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,644 | INFO     | mean y: 2753840.6182572613
[2026-03-17 05:39:59] 2026-03-17 04:39:07,644 | INFO     | intersect: 9155820028.608362
[2026-03-17 05:39:59] 2026-03-17 04:39:07,645 | INFO     | chi2: 1.834400901774621
[2026-03-17 05:39:59] 2026-03-17 04:39:07,646 | INFO     | current chi2=1.834400901774621 (change=46.295921316749634 %)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,647 | INFO     | sum of square deviations: 114775954799.5
[2026-03-17 05:39:59] 2026-03-17 04:39:07,664 | INFO     | sum of deviations: -641898138696.5001
[2026-03-17 05:39:59] 2026-03-17 04:39:07,665 | INFO     | mean x: 1773700415.5
[2026-03-17 05:39:59] 2026-03-17 04:39:07,665 | INFO     | mean y: 2756186.58913649
[2026-03-17 05:39:59] 2026-03-17 04:39:07,665 | INFO     | intersect: 9922386106.493046
[2026-03-17 05:39:59] 2026-03-17 04:39:07,666 | INFO     | chi2: 1.7080595136769934
[2026-03-17 05:39:59] 2026-03-17 04:39:07,666 | INFO     | current chi2=1.7080595136769934 (change=6.887337875564905 %)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,666 | INFO     | left removable region: 20
[2026-03-17 05:39:59] 2026-03-17 04:39:07,668 | INFO     | sum of square deviations: 104996751908.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,684 | INFO     | sum of deviations: -560756728981.9999
[2026-03-17 05:39:59] 2026-03-17 04:39:07,684 | INFO     | mean x: 1773700385.0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,684 | INFO     | mean y: 2764474.2051649927
[2026-03-17 05:39:59] 2026-03-17 04:39:07,685 | INFO     | intersect: 9475575851.82009
[2026-03-17 05:39:59] 2026-03-17 04:39:07,685 | INFO     | chi2: 0.7404162770208811
[2026-03-17 05:39:59] 2026-03-17 04:39:07,686 | INFO     | current memory leak: -5.34 B/s (using 697 data points, chi2=0.74)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,687 | INFO     | could have reported an average CPU frequency of 1999 MHz (28 samples)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,687 | INFO     | ..............................
[2026-03-17 05:39:59] 2026-03-17 04:39:07,687 | INFO     | . Timing measurements:
[2026-03-17 05:39:59] 2026-03-17 04:39:07,687 | INFO     | . get job = 0 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,687 | INFO     | . initial setup = 16 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,687 | INFO     | . payload setup = 10 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,688 | INFO     | . stage-in = 0 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,688 | INFO     | . payload execution = 44416 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,688 | INFO     | . stage-out = 3 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,688 | INFO     | . log creation = 1 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,688 | INFO     | ..............................
[2026-03-17 05:39:59] 2026-03-17 04:39:07,823 | INFO     | 
[2026-03-17 05:39:59] 2026-03-17 04:39:07,823 | INFO     | job summary report
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | --------------------------------------------------
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | PanDA job id: 7056944928
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | task id: 49178853
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | errors: (none)
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | pilot state: finished 
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | transexitcode: 0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,824 | INFO     | exeerrorcode: 0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | exeerrordiag: 
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | exitcode: 0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | exitmsg: OK
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | cpuconsumptiontime: 177216 s
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | nevents: 400
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | neventsw: 0
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | pid: 18627
[2026-03-17 05:39:59] 2026-03-17 04:39:07,825 | INFO     | pgrp: 18627
[2026-03-17 05:39:59] 2026-03-17 04:39:07,826 | INFO     | corecount: 8
[2026-03-17 05:39:59] 2026-03-17 04:39:07,826 | INFO     | event service: False
[2026-03-17 05:39:59] 2026-03-17 04:39:07,826 | INFO     | sizes: {0: 2279909, 1: 2280370, 44431: 2324830, 44436: 2333886, 44437: 2334024}
[2026-03-17 05:39:59] 2026-03-17 04:39:07,826 | INFO     | --------------------------------------------------
[2026-03-17 05:39:59] 2026-03-17 04:39:07,826 | INFO     | 
[2026-03-17 05:39:59] 2026-03-17 04:39:07,826 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2026-03-17 05:39:59] 2026-03-17 04:39:08,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,135 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,135 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,135 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 05:39:59] 2026-03-17 04:39:08,138 | INFO     | job 7056944928 has completed (purged errors)
[2026-03-17 05:39:59] 2026-03-17 04:39:08,138 | INFO     | overall cleanup function is called
[2026-03-17 05:39:59] 2026-03-17 04:39:09,147 | INFO     | --- collectZombieJob: --- 10, [18627]
[2026-03-17 05:39:59] 2026-03-17 04:39:09,147 | INFO     | zombie collector waiting for pid 18627
[2026-03-17 05:39:59] 2026-03-17 04:39:09,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 05:39:59] 2026-03-17 04:39:09,148 | INFO     | collected zombie processes
[2026-03-17 05:39:59] 2026-03-17 04:39:09,148 | INFO     | will attempt to kill all subprocesses of pid=18627
[2026-03-17 05:39:59] 2026-03-17 04:39:09,267 | INFO     | process IDs to be killed: [18627] (in reverse order)
[2026-03-17 05:39:59] 2026-03-17 04:39:10,264 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 05:39:59] 2026-03-17 04:39:10,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 05:39:59] 2026-03-17 04:39:10,267 | INFO     | did not find any defunct processes belonging to 18627
[2026-03-17 05:39:59] 2026-03-17 04:39:10,271 | INFO     | did not find any defunct processes belonging to 18627
[2026-03-17 05:39:59] 2026-03-17 04:39:10,271 | INFO     | ready for new job
[2026-03-17 05:39:59] 2026-03-17 04:39:10,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 05:39:59] 2026-03-17 04:39:10,275 | INFO     | **************************************
[2026-03-17 05:39:59] 2026-03-17 04:39:10,275 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 05:39:59] 2026-03-17 04:39:10,275 | INFO     | **************************************
[2026-03-17 05:39:59] 2026-03-17 04:39:10,275 | INFO     | 
[2026-03-17 05:39:59] 2026-03-17 04:39:10,276 | INFO     | pilot is running in a VM
[2026-03-17 05:39:59] 2026-03-17 04:39:10,276 | INFO     | architecture information:
[2026-03-17 05:39:59] 2026-03-17 04:39:10,280 | INFO     | executing command: cat /etc/os-release
[2026-03-17 05:39:59] 2026-03-17 04:39:10,508 | INFO     | cat /etc/os-release:
[2026-03-17 05:39:59] NAME="CentOS Linux"
[2026-03-17 05:39:59] VERSION="7 (Core)"
[2026-03-17 05:39:59] ID="centos"
[2026-03-17 05:39:59] ID_LIKE="rhel fedora"
[2026-03-17 05:39:59] VERSION_ID="7"
[2026-03-17 05:39:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 05:39:59] ANSI_COLOR="0;31"
[2026-03-17 05:39:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 05:39:59] HOME_URL="https://www.centos.org/"
[2026-03-17 05:39:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 05:39:59] 
[2026-03-17 05:39:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 05:39:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 05:39:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 05:39:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 05:39:59] 
[2026-03-17 05:39:59] 2026-03-17 04:39:10,508 | INFO     | **************************************
[2026-03-17 05:39:59] 2026-03-17 04:39:11,011 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2026-03-17 05:39:59] 2026-03-17 04:39:11,279 | INFO     | sufficient remaining disk space (495538143232 B)
[2026-03-17 05:39:59] 2026-03-17 04:39:11,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 05:39:59] 2026-03-17 04:39:11,280 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 05:39:59] 2026-03-17 04:39:11,280 | INFO     | update_server=False
[2026-03-17 05:39:59] 2026-03-17 04:39:11,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 05:39:59] 2026-03-17 04:39:11,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 05:39:59] 2026-03-17 04:39:11,444 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 05:39:59] 2026-03-17 04:39:11,444 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 05:39:59] 2026-03-17 04:39:11,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 05:39:59] 2026-03-17 04:39:11,445 | INFO     | will abort loop
[2026-03-17 05:39:59] 2026-03-17 04:39:11,793 | INFO     | all data control threads have been joined
[2026-03-17 05:39:59] 2026-03-17 04:39:12,218 | INFO     | all payload control threads have been joined
[2026-03-17 05:39:59] 2026-03-17 04:39:12,286 | INFO     | [job] retrieve thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,450 | INFO     | [job] job monitor thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,609 | INFO     | all job control threads have been joined
[2026-03-17 05:39:59] 2026-03-17 04:39:12,631 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,704 | INFO     | [payload] failed_post thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,799 | INFO     | [data] control thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 05:39:59] 2026-03-17 04:39:12,832 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,833 | INFO     | [job] validate thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,847 | INFO     | [payload] validate_post thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:12,977 | INFO     | [data] copytool_in thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:13,224 | INFO     | [payload] control thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:13,290 | INFO     | [data] copytool_out thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:13,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 05:39:59] 2026-03-17 04:39:13,615 | INFO     | [job] control thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:13,634 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:13,771 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:13,833 | INFO     | [job] queue monitor thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:17,552 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 05:39:59] 2026-03-17 04:39:40,582 | INFO     | PID=14142 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-17 05:39:59] 2026-03-17 04:39:40,582 | INFO     | .. there are 9 such processes running
[2026-03-17 05:39:59] 2026-03-17 04:39:40,584 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 05:39:59] 2026-03-17 04:39:40,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 05:39:59] 2026-03-17 04:39:40,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 05:39:59] 2026-03-17 04:39:47,413 | INFO     | [monitor] cgroup control has ended
[2026-03-17 05:39:59] 2026-03-17 04:39:49,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967165544256)>', '<ExcThread(monitor, started 139966273287936)>']
[2026-03-17 05:39:59] 2026-03-17 04:39:49,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 05:39:59] 2026-03-17 04:39:49,637 | INFO     | [monitor] control thread has ended
[2026-03-17 05:39:59] 2026-03-17 04:39:54,210 | INFO     | all workflow threads have been joined
[2026-03-17 05:39:59] 2026-03-17 04:39:54,210 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 05:39:59] 2026-03-17 04:39:54,211 | INFO     | traces error code: 0
[2026-03-17 05:39:59] 2026-03-17 04:39:54,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 05:39:59] 2026-03-17 04:39:54,695 [wrapper] ==== pilot stdout END ====
[2026-03-17 05:39:59] 2026-03-17 04:39:54,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 05:39:59] 2026-03-17 04:39:54,820 [wrapper] pilotpid: 14142
[2026-03-17 05:39:59] 2026-03-17 04:39:54,915 [wrapper] Pilot exit status: 0
[2026-03-17 05:39:59] 2026-03-17 04:39:55,403 [wrapper] pandaids: 7056944928
[2026-03-17 05:39:59] 2026-03-17 04:39:56,289 [wrapper] cleanup supervisor_pilot 30576 14143
[2026-03-17 05:39:59] 2026-03-17 04:39:56,344 [wrapper] Test setup, not cleaning
[2026-03-17 05:39:59] 2026-03-17 04:39:56,445 [wrapper] apfmon messages muted
[2026-03-17 05:39:59] 2026-03-17 04:39:56,543 [wrapper] ==== wrapper stdout END ====
[2026-03-17 05:39:59] 2026-03-17 04:39:56,649 [wrapper] ==== wrapper stderr END ====
[2026-03-17 05:39:59]  *** Error codes and diagnostics ***
[2026-03-17 05:39:59]     "exeErrorCode": 0,
[2026-03-17 05:39:59]     "exeErrorDiag": "",
[2026-03-17 05:39:59]     "pilotErrorCode": 0,
[2026-03-17 05:39:59]     "pilotErrorDiag": "",
[2026-03-17 05:39:59]  *** Listing of results directory ***
[2026-03-17 05:39:59] total 502120
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-17 05:39:59] -rwx------. 1 boinc boinc     36322 Mar 16 16:06 runpilot2-wrapper.sh
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:09 queuedata.json
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc       100 Mar 16 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 05:39:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 17:16 run_atlas
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc       105 Mar 16 17:16 job.xml
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc      6392 Mar 16 17:16 init_data.xml
[2026-03-17 05:39:59] -rw-r--r--. 2 boinc boinc 247160338 Mar 16 17:16 EVNT.49129889._000021.pool.root.1
[2026-03-17 05:39:59] -rw-r--r--. 2 boinc boinc     15845 Mar 16 17:16 start_atlas.sh
[2026-03-17 05:39:59] drwxrwx--x. 2 boinc boinc        68 Mar 16 17:16 shared
[2026-03-17 05:39:59] -rw-r--r--. 2 boinc boinc    597553 Mar 16 17:16 input.tar.gz
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc         0 Mar 16 17:16 boinc_lockfile
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc      2660 Mar 16 17:16 pandaJob.out
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc   1006429 Mar 16 17:18 agis_schedconf.cvmfs.json
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc       415 Mar 16 17:18 workernode_map.json
[2026-03-17 05:39:59] drwx------. 5 boinc boinc      4096 Mar 16 17:18 pilot3
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc 249132023 Mar 17 05:37 HITS.49178853._000502.pool.root.1
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc       532 Mar 17 05:38 boinc_task_state.xml
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc      1019 Mar 17 05:38 memory_monitor_summary.json
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc   1511579 Mar 17 05:39 agis_ddmendpoints.agis.ALL.json
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc    859722 Mar 17 05:39 log.49178853._000502.job.log.tgz.1
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc      6317 Mar 17 05:39 heartbeat.json
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc      8192 Mar 17 05:39 boinc_mmap_file
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc        29 Mar 17 05:39 wrapper_checkpoint.txt
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc        95 Mar 17 05:39 pilot_heartbeat.json
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc      5067 Mar 17 05:39 pilotlog.txt
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc   6119452 Mar 17 05:39 log.49178853._000502.job.log.1
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc       357 Mar 17 05:39 output.list
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc       620 Mar 17 05:39 runtime_log
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc   6993920 Mar 17 05:39 result.tar.gz
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc      8832 Mar 17 05:39 runtime_log.err
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc       658 Mar 17 05:39 2paNDmshOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5oxLDmRhYSSn.diag
[2026-03-17 05:39:59] -rw-r--r--. 1 boinc boinc     20697 Mar 17 05:39 stderr.txt
[2026-03-17 05:39:59] HITS file was successfully produced:
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc 249132023 Mar 17 05:37 shared/HITS.pool.root.1
[2026-03-17 05:39:59]  *** Contents of shared directory: ***
[2026-03-17 05:39:59] total 492096
[2026-03-17 05:39:59] -rw-r--r--. 2 boinc boinc 247160338 Mar 16 17:16 ATLAS.root_0
[2026-03-17 05:39:59] -rw-r--r--. 2 boinc boinc     15845 Mar 16 17:16 start_atlas.sh
[2026-03-17 05:39:59] -rw-r--r--. 2 boinc boinc    597553 Mar 16 17:16 input.tar.gz
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc 249132023 Mar 17 05:37 HITS.pool.root.1
[2026-03-17 05:39:59] -rw-------. 1 boinc boinc   6993920 Mar 17 05:39 result.tar.gz
05:40:00 (9421): run_atlas exited; CPU time 177959.345248
05:40:00 (9421): called boinc_finish(0)

</stderr_txt>
]]>

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