Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:05:14 (2856075): wrapper (7.7.26015): starting
02:05:14 (2856075): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 02:05:14] Arguments: --nthreads 4
[2026-03-19 02:05:14] Threads: 4
[2026-03-19 02:05:14] Checking for CVMFS
[2026-03-19 02:05:14] No cvmfs_config command found, will try listing directly
[2026-03-19 02:05:14] CVMFS is ok
[2026-03-19 02:05:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:05:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:05:14] Further information can be found at the LHC@home message board.
[2026-03-19 02:05:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:05:14] Checking for apptainer binary...
[2026-03-19 02:05:14] which: no apptainer in ((null))
[2026-03-19 02:05:14] apptainer is not installed, using version from CVMFS
[2026-03-19 02:05:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:05:14] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-19 02:05:14] apptainer works
[2026-03-19 02:05:14] Set ATHENA_PROC_NUMBER=4
[2026-03-19 02:05:14] Set ATHENA_CORE_NUMBER=4
[2026-03-19 02:05:14] Starting ATLAS job with PandaID=7056947934
[2026-03-19 02:05:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 04:46:30]  *** The last 200 lines of the pilot log: ***
[2026-03-19 04:46:30] 2026-03-19 03:42:01,777 | INFO     | preparing for final server update for job 7056947934 in state='finished'
[2026-03-19 04:46:30] 2026-03-19 03:42:01,876 | INFO     | time since job start (9392s) is within the limit (345600.0s)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,444 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,444 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7056947934/jobReport.json
[2026-03-19 04:46:30] 2026-03-19 03:42:02,446 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/0/workernode_map.json
[2026-03-19 04:46:30] 2026-03-19 03:42:02,446 | INFO     | this job has now completed (state=finished)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,446 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,446 | INFO     | log transfer has been attempted: DONE
[2026-03-19 04:46:30] 2026-03-19 03:42:02,446 | INFO     | job 7056947934 has finished - writing final server update
[2026-03-19 04:46:30] 2026-03-19 03:42:02,446 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_229460/.job.ad'
[2026-03-19 04:46:30] 2026-03-19 03:42:02,446 | INFO     | total number of processed events: 400 (read)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,464 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7056947934/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,464 | INFO     | extracted standard info from prmon json
[2026-03-19 04:46:30] 2026-03-19 03:42:02,464 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 04:46:30] 2026-03-19 03:42:02,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 04:46:30] 2026-03-19 03:42:02,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 04:46:30] 2026-03-19 03:42:02,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 04:46:30] 2026-03-19 03:42:02,466 | INFO     | fitting pss+swap vs Time
[2026-03-19 04:46:30] 2026-03-19 03:42:02,466 | INFO     | sum of square deviations: 1132458442.5
[2026-03-19 04:46:30] 2026-03-19 03:42:02,467 | INFO     | sum of deviations: 16540978471.5
[2026-03-19 04:46:30] 2026-03-19 03:42:02,467 | INFO     | mean x: 1773887021.5
[2026-03-19 04:46:30] 2026-03-19 03:42:02,467 | INFO     | mean y: 2307368.3311688313
[2026-03-19 04:46:30] 2026-03-19 03:42:02,467 | INFO     | intersect: -25907541445.838238
[2026-03-19 04:46:30] 2026-03-19 03:42:02,467 | INFO     | chi2: 1.0637002560659743
[2026-03-19 04:46:30] 2026-03-19 03:42:02,467 | INFO     | sum of square deviations: 1025693650.0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | sum of deviations: 15866681696.0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | mean x: 1773886869.0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | mean y: 2306404.865771812
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | intersect: -27438341507.0493
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | chi2: 1.0644942367807253
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | current chi2=1.0644942367807253 (change=-0.07464327569944317 %)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | right removable region: 148
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | sum of square deviations: 1025693650.0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | sum of deviations: 2100060602.9999998
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | mean x: 1773887174.0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,468 | INFO     | mean y: 2327558.637583893
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | intersect: -3629624894.499282
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | chi2: 0.0004354863471897887
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | current chi2=0.0004354863471897887 (change=99.95905929845308 %)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | sum of square deviations: 925859220.0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | sum of deviations: 1948830592.4999995
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | mean x: 1773887326.5
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | mean y: 2327785.909722222
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | intersect: -3731507569.2442017
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | chi2: 0.00038960724738091825
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | current chi2=0.00038960724738091825 (change=10.535140792571378 %)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,469 | INFO     | left removable region: 20
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | sum of square deviations: 650252192.0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | sum of deviations: 1129386482.5
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | mean x: 1773887448.5
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | mean y: 2328540.4296875
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | intersect: -3078636861.08689
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | chi2: 0.00010761886469119114
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | current memory leak: 1.74 B/s (using 128 data points, chi2=0.00)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | could have reported an average CPU frequency of 3557 MHz (9 samples)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | ..............................
[2026-03-19 04:46:30] 2026-03-19 03:42:02,470 | INFO     | . Timing measurements:
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | . get job = 0 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | . initial setup = 5 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | . payload setup = 8 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | . stage-in = 0 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | . payload execution = 9367 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | . stage-out = 0 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | . log creation = 0 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,471 | INFO     | ..............................
[2026-03-19 04:46:30] 2026-03-19 03:42:02,518 | INFO     | 
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | job summary report
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | --------------------------------------------------
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | PanDA job id: 7056947934
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | task id: 49179056
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | errors: (none)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | pilot state: finished 
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | transexitcode: 0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | exeerrorcode: 0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | exeerrordiag: 
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | exitcode: 0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | exitmsg: OK
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | cpuconsumptiontime: 36201 s
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | nevents: 400
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | neventsw: 0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | pid: 2866725
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | pgrp: 2866725
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | corecount: 4
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | event service: False
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | sizes: {0: 2280293, 11: 2280293, 9379: 2308605, 9380: 2317683, 9381: 2317885}
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | --------------------------------------------------
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | 
[2026-03-19 04:46:30] 2026-03-19 03:42:02,519 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/0
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,538 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 04:46:30] 2026-03-19 03:42:02,538 | INFO     | job 7056947934 has completed (purged errors)
[2026-03-19 04:46:30] 2026-03-19 03:42:02,538 | INFO     | overall cleanup function is called
[2026-03-19 04:46:30] 2026-03-19 03:42:03,544 | INFO     | --- collectZombieJob: --- 10, [2866725]
[2026-03-19 04:46:30] 2026-03-19 03:42:03,545 | INFO     | zombie collector waiting for pid 2866725
[2026-03-19 04:46:30] 2026-03-19 03:42:03,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 04:46:30] 2026-03-19 03:42:03,545 | INFO     | collected zombie processes
[2026-03-19 04:46:30] 2026-03-19 03:42:03,545 | INFO     | will attempt to kill all subprocesses of pid=2866725
[2026-03-19 04:46:30] 2026-03-19 03:42:04,034 | INFO     | process IDs to be killed: [2866725] (in reverse order)
[2026-03-19 04:46:30] 2026-03-19 03:42:04,245 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 04:46:30] 2026-03-19 03:42:04,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 04:46:30] 2026-03-19 03:42:04,275 | INFO     | did not find any defunct processes belonging to 2866725
[2026-03-19 04:46:30] 2026-03-19 03:42:04,305 | INFO     | did not find any defunct processes belonging to 2866725
[2026-03-19 04:46:30] 2026-03-19 03:42:04,305 | INFO     | ready for new job
[2026-03-19 04:46:30] 2026-03-19 03:42:04,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 04:46:30] 2026-03-19 03:42:04,306 | INFO     | **************************************
[2026-03-19 04:46:30] 2026-03-19 03:42:04,306 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 04:46:30] 2026-03-19 03:42:04,306 | INFO     | **************************************
[2026-03-19 04:46:30] 2026-03-19 03:42:04,306 | INFO     | 
[2026-03-19 04:46:30] 2026-03-19 03:42:04,311 | INFO     | architecture information:
[2026-03-19 04:46:30] 2026-03-19 03:42:04,312 | INFO     | executing command: cat /etc/os-release
[2026-03-19 04:46:30] 2026-03-19 03:42:04,324 | INFO     | cat /etc/os-release:
[2026-03-19 04:46:30] NAME="CentOS Linux"
[2026-03-19 04:46:30] VERSION="7 (Core)"
[2026-03-19 04:46:30] ID="centos"
[2026-03-19 04:46:30] ID_LIKE="rhel fedora"
[2026-03-19 04:46:30] VERSION_ID="7"
[2026-03-19 04:46:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 04:46:30] ANSI_COLOR="0;31"
[2026-03-19 04:46:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 04:46:30] HOME_URL="https://www.centos.org/"
[2026-03-19 04:46:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 04:46:30] 
[2026-03-19 04:46:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 04:46:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 04:46:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 04:46:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 04:46:30] 
[2026-03-19 04:46:30] 2026-03-19 03:42:04,324 | INFO     | **************************************
[2026-03-19 04:46:30] 2026-03-19 03:42:04,827 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-03-19 04:46:30] 2026-03-19 03:42:04,843 | INFO     | sufficient remaining disk space (32825671680 B)
[2026-03-19 04:46:30] 2026-03-19 03:42:04,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 04:46:30] 2026-03-19 03:42:04,843 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 04:46:30] 2026-03-19 03:42:04,843 | INFO     | update_server=False
[2026-03-19 04:46:30] 2026-03-19 03:42:04,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 04:46:30] 2026-03-19 03:42:04,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 04:46:30] 2026-03-19 03:42:04,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 04:46:30] 2026-03-19 03:42:04,844 | INFO     | aborting loop
[2026-03-19 04:46:30] 2026-03-19 03:42:05,018 | INFO     | all payload control threads have been joined
[2026-03-19 04:46:30] 2026-03-19 03:42:05,101 | INFO     | all data control threads have been joined
[2026-03-19 04:46:30] 2026-03-19 03:42:05,847 | INFO     | [job] retrieve thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:05,848 | INFO     | [job] job monitor thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:05,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:06,023 | INFO     | [payload] control thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:06,024 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:06,056 | INFO     | [payload] validate_post thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:06,106 | INFO     | [data] control thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:06,193 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:06,414 | INFO     | all job control threads have been joined
[2026-03-19 04:46:30] 2026-03-19 03:42:06,642 | INFO     | [data] copytool_in thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:06,848 | INFO     | [data] copytool_out thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:07,023 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:07,219 | INFO     | [payload] failed_post thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:07,244 | INFO     | [job] validate thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:07,419 | INFO     | [job] control thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:07,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 04:46:30] 2026-03-19 03:42:07,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 04:46:30] 2026-03-19 03:42:08,533 | INFO     | [job] queue monitor thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:11,492 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 04:46:30] 2026-03-19 03:42:35,537 | INFO     | PID=2860873 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 04:46:30] 2026-03-19 03:42:35,537 | INFO     | .. there are 43 such processes running
[2026-03-19 04:46:30] 2026-03-19 03:42:35,537 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 04:46:30] 2026-03-19 03:42:35,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 04:46:30] 2026-03-19 03:42:35,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 04:46:30] 2026-03-19 03:42:45,245 | INFO     | [monitor] cgroup control has ended
[2026-03-19 04:46:30] 2026-03-19 03:42:46,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23307735234368)>', '<ExcThread(monitor, started 23307486488320)>']
[2026-03-19 04:46:30] 2026-03-19 03:42:46,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 04:46:30] 2026-03-19 03:42:46,592 | INFO     | [monitor] control thread has ended
[2026-03-19 04:46:30] 2026-03-19 03:42:51,100 | INFO     | all workflow threads have been joined
[2026-03-19 04:46:30] 2026-03-19 03:42:51,101 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 04:46:30] 2026-03-19 03:42:51,101 | INFO     | traces error code: 0
[2026-03-19 04:46:30] 2026-03-19 03:42:51,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 04:46:30] 2026-03-19 03:42:51,352 [wrapper] ==== pilot stdout END ====
[2026-03-19 04:46:30] 2026-03-19 03:42:51,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 04:46:30] 2026-03-19 03:42:51,357 [wrapper] pilotpid: 2860873
[2026-03-19 04:46:30] 2026-03-19 03:42:51,359 [wrapper] Pilot exit status: 0
[2026-03-19 04:46:30] 2026-03-19 03:42:51,366 [wrapper] pandaids: 7056947934
[2026-03-19 04:46:30] 2026-03-19 03:42:51,505 [wrapper] cleanup supervisor_pilot 3522100 2860874
[2026-03-19 04:46:30] 2026-03-19 03:42:51,507 [wrapper] Test setup, not cleaning
[2026-03-19 04:46:30] 2026-03-19 03:42:51,508 [wrapper] apfmon messages muted
[2026-03-19 04:46:30] 2026-03-19 03:42:51,510 [wrapper] ==== wrapper stdout END ====
[2026-03-19 04:46:30] 2026-03-19 03:42:51,511 [wrapper] ==== wrapper stderr END ====
[2026-03-19 04:46:30]  *** Error codes and diagnostics ***
[2026-03-19 04:46:30]     "exeErrorCode": 0,
[2026-03-19 04:46:30]     "exeErrorDiag": "",
[2026-03-19 04:46:30]     "pilotErrorCode": 0,
[2026-03-19 04:46:30]     "pilotErrorDiag": "",
[2026-03-19 04:46:30]  *** Listing of results directory ***
[2026-03-19 04:46:30] total 411532
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-19 04:46:30] -rwx------. 1 boinc boinc     36322 Mar 16 16:05 runpilot2-wrapper.sh
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:06 queuedata.json
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc       100 Mar 19 02:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 04:46:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 02:05 run_atlas
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc       105 Mar 19 02:05 job.xml
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc      6708 Mar 19 02:05 init_data.xml
[2026-03-19 04:46:30] -rw-r--r--. 2 boinc boinc 216926403 Mar 19 02:05 EVNT.49130490._000009.pool.root.1
[2026-03-19 04:46:30] drwxrwx--x. 2 boinc boinc      4096 Mar 19 02:05 shared
[2026-03-19 04:46:30] -rw-r--r--. 2 boinc boinc    597533 Mar 19 02:05 input.tar.gz
[2026-03-19 04:46:30] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:05 start_atlas.sh
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc         0 Mar 19 02:05 boinc_lockfile
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc      2599 Mar 19 02:05 pandaJob.out
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc   1010422 Mar 19 02:05 agis_schedconf.cvmfs.json
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc   1511579 Mar 19 02:05 agis_ddmendpoints.agis.ALL.json
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc       445 Mar 19 02:05 workernode_map.json
[2026-03-19 04:46:30] drwx------. 5 boinc boinc      4096 Mar 19 02:05 pilot3
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc 197236722 Mar 19 04:41 HITS.49179056._000202.pool.root.1
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc       529 Mar 19 04:41 boinc_task_state.xml
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc        95 Mar 19 04:41 pilot_heartbeat.json
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc      1027 Mar 19 04:41 memory_monitor_summary.json
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc    322450 Mar 19 04:42 log.49179056._000202.job.log.tgz.1
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc      6358 Mar 19 04:42 heartbeat.json
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc      4830 Mar 19 04:42 pilotlog.txt
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc   1327318 Mar 19 04:42 log.49179056._000202.job.log.1
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc       357 Mar 19 04:42 output.list
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc       620 Mar 19 04:42 runtime_log
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc   1669120 Mar 19 04:42 result.tar.gz
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc      9221 Mar 19 04:42 runtime_log.err
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc       663 Mar 19 04:42 FfvLDmMgOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdXuLDm9talnm.diag
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc        27 Mar 19 04:46 wrapper_checkpoint.txt
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc      8192 Mar 19 04:46 boinc_mmap_file
[2026-03-19 04:46:30] -rw-r--r--. 1 boinc boinc     21139 Mar 19 04:46 stderr.txt
[2026-03-19 04:46:30] HITS file was successfully produced:
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc 197236722 Mar 19 04:41 shared/HITS.pool.root.1
[2026-03-19 04:46:30]  *** Contents of shared directory: ***
[2026-03-19 04:46:30] total 406700
[2026-03-19 04:46:30] -rw-r--r--. 2 boinc boinc 216926403 Mar 19 02:05 ATLAS.root_0
[2026-03-19 04:46:30] -rw-r--r--. 2 boinc boinc    597533 Mar 19 02:05 input.tar.gz
[2026-03-19 04:46:30] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:05 start_atlas.sh
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc 197236722 Mar 19 04:41 HITS.pool.root.1
[2026-03-19 04:46:30] -rw-------. 1 boinc boinc   1669120 Mar 19 04:42 result.tar.gz
04:46:31 (2856075): run_atlas exited; CPU time 36646.360200
04:46:31 (2856075): called boinc_finish(0)

</stderr_txt>
]]>

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