Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:36:37 (2265878): wrapper (7.7.26015): starting
06:36:37 (2265878): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 06:36:37] Arguments: --nthreads 4
[2026-03-19 06:36:37] Threads: 4
[2026-03-19 06:36:37] Checking for CVMFS
[2026-03-19 06:36:37] No cvmfs_config command found, will try listing directly
[2026-03-19 06:36:37] CVMFS is ok
[2026-03-19 06:36:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 06:36:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 06:36:37] Further information can be found at the LHC@home message board.
[2026-03-19 06:36:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 06:36:37] Checking for apptainer binary...
[2026-03-19 06:36:37] which: no apptainer in ((null))
[2026-03-19 06:36:38] apptainer is not installed, using version from CVMFS
[2026-03-19 06:36:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 06:36:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-19 06:36:38] apptainer works
[2026-03-19 06:36:38] Set ATHENA_PROC_NUMBER=4
[2026-03-19 06:36:38] Set ATHENA_CORE_NUMBER=4
[2026-03-19 06:36:38] Starting ATLAS job with PandaID=7056945087
[2026-03-19 06:36:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 10:34:12]  *** The last 200 lines of the pilot log: ***
[2026-03-19 10:34:12] 2026-03-19 09:30:22,477 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 10:34:12] 2026-03-19 09:30:22,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 10:34:12] 2026-03-19 09:30:22,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 10:34:12] 2026-03-19 09:30:22,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 10:34:12] 2026-03-19 09:30:22,479 | INFO     | fitting pss+swap vs Time
[2026-03-19 10:34:12] 2026-03-19 09:30:22,479 | INFO     | sum of square deviations: 3772712597.5
[2026-03-19 10:34:12] 2026-03-19 09:30:22,480 | INFO     | sum of deviations: 3677657273.499996
[2026-03-19 10:34:12] 2026-03-19 09:30:22,480 | INFO     | mean x: 1773905622.5
[2026-03-19 10:34:12] 2026-03-19 09:30:22,480 | INFO     | mean y: 2327759.9695652174
[2026-03-19 10:34:12] 2026-03-19 09:30:22,480 | INFO     | intersect: -1726883449.8672752
[2026-03-19 10:34:12] 2026-03-19 09:30:22,480 | INFO     | chi2: 1.861784918438115
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | sum of square deviations: 3531973200.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | sum of deviations: 17822176873.999996
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | mean x: 1773905470.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | mean y: 2336559.0444444446
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | intersect: -8948710137.486574
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | chi2: 1.0681494241531322
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | current chi2=1.0681494241531322 (change=42.62766802036285 %)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,481 | INFO     | sum of square deviations: 3301699115.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,482 | INFO     | sum of deviations: 17296058096.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,482 | INFO     | mean x: 1773905317.5
[2026-03-19 10:34:12] 2026-03-19 09:30:22,482 | INFO     | mean y: 2336210.5636363635
[2026-03-19 10:34:12] 2026-03-19 09:30:22,482 | INFO     | intersect: -9290324434.6458
[2026-03-19 10:34:12] 2026-03-19 09:30:22,482 | INFO     | chi2: 1.0685894377609675
[2026-03-19 10:34:12] 2026-03-19 09:30:22,483 | INFO     | current chi2=1.0685894377609675 (change=-0.041194012549710245 %)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,483 | INFO     | right removable region: 219
[2026-03-19 10:34:12] 2026-03-19 09:30:22,483 | INFO     | sum of square deviations: 3531973200.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,483 | INFO     | sum of deviations: -16626355078.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,483 | INFO     | mean x: 1773905775.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,483 | INFO     | mean y: 2340433.5022222223
[2026-03-19 10:34:12] 2026-03-19 09:30:22,483 | INFO     | intersect: 8352796572.315725
[2026-03-19 10:34:12] 2026-03-19 09:30:22,484 | INFO     | chi2: 0.8201075297406502
[2026-03-19 10:34:12] 2026-03-19 09:30:22,484 | INFO     | current chi2=0.8201075297406502 (change=55.95046873466709 %)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,484 | INFO     | sum of square deviations: 3301699115.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | sum of deviations: -14150611670.5
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | mean x: 1773905927.5
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | mean y: 2338790.95
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | intersect: 7605046683.383326
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | chi2: 0.8171279641004381
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | current chi2=0.8171279641004381 (change=0.36331402068144913 %)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | left removable region: 20
[2026-03-19 10:34:12] 2026-03-19 09:30:22,485 | INFO     | sum of square deviations: 2443580700.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | sum of deviations: 2302577308.9999995
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | mean x: 1773905897.0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | mean y: 2346039.381909548
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | intersect: -1669199110.2149465
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | chi2: 0.004513739054132326
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | current memory leak: 0.94 B/s (using 199 data points, chi2=0.00)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | could have reported an average CPU frequency of 3578 MHz (11 samples)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | ..............................
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | . Timing measurements:
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | . get job = 0 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | . initial setup = 5 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | . payload setup = 8 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | . stage-in = 0 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | . payload execution = 13986 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,486 | INFO     | . stage-out = 0 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,487 | INFO     | . log creation = 0 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,487 | INFO     | ..............................
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | 
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | job summary report
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | --------------------------------------------------
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | PanDA job id: 7056945087
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | task id: 49178954
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | errors: (none)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | pilot state: finished 
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | transexitcode: 0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | exeerrorcode: 0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | exeerrordiag: 
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | exitcode: 0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,546 | INFO     | exitmsg: OK
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | cpuconsumptiontime: 54174 s
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | nevents: 400
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | neventsw: 0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | pid: 2287788
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | pgrp: 2287788
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | corecount: 4
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | event service: False
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | sizes: {0: 2280324, 11: 2280324, 13995: 2310727, 13997: 2319943}
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | --------------------------------------------------
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | 
[2026-03-19 10:34:12] 2026-03-19 09:30:22,547 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 10:34:12] 2026-03-19 09:30:22,562 | INFO     | job 7056945087 has completed (purged errors)
[2026-03-19 10:34:12] 2026-03-19 09:30:22,562 | INFO     | overall cleanup function is called
[2026-03-19 10:34:12] 2026-03-19 09:30:23,569 | INFO     | --- collectZombieJob: --- 10, [2287788]
[2026-03-19 10:34:12] 2026-03-19 09:30:23,569 | INFO     | zombie collector waiting for pid 2287788
[2026-03-19 10:34:12] 2026-03-19 09:30:23,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 10:34:12] 2026-03-19 09:30:23,569 | INFO     | collected zombie processes
[2026-03-19 10:34:12] 2026-03-19 09:30:23,569 | INFO     | will attempt to kill all subprocesses of pid=2287788
[2026-03-19 10:34:12] 2026-03-19 09:30:24,036 | INFO     | process IDs to be killed: [2287788] (in reverse order)
[2026-03-19 10:34:12] 2026-03-19 09:30:24,282 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 10:34:12] 2026-03-19 09:30:24,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 10:34:12] 2026-03-19 09:30:24,315 | INFO     | did not find any defunct processes belonging to 2287788
[2026-03-19 10:34:12] 2026-03-19 09:30:24,348 | INFO     | did not find any defunct processes belonging to 2287788
[2026-03-19 10:34:12] 2026-03-19 09:30:24,348 | INFO     | ready for new job
[2026-03-19 10:34:12] 2026-03-19 09:30:24,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 10:34:12] 2026-03-19 09:30:24,350 | INFO     | **************************************
[2026-03-19 10:34:12] 2026-03-19 09:30:24,350 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 10:34:12] 2026-03-19 09:30:24,350 | INFO     | **************************************
[2026-03-19 10:34:12] 2026-03-19 09:30:24,350 | INFO     | 
[2026-03-19 10:34:12] 2026-03-19 09:30:24,356 | INFO     | architecture information:
[2026-03-19 10:34:12] 2026-03-19 09:30:24,356 | INFO     | executing command: cat /etc/os-release
[2026-03-19 10:34:12] 2026-03-19 09:30:24,369 | INFO     | cat /etc/os-release:
[2026-03-19 10:34:12] NAME="CentOS Linux"
[2026-03-19 10:34:12] VERSION="7 (Core)"
[2026-03-19 10:34:12] ID="centos"
[2026-03-19 10:34:12] ID_LIKE="rhel fedora"
[2026-03-19 10:34:12] VERSION_ID="7"
[2026-03-19 10:34:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 10:34:12] ANSI_COLOR="0;31"
[2026-03-19 10:34:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 10:34:12] HOME_URL="https://www.centos.org/"
[2026-03-19 10:34:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 10:34:12] 
[2026-03-19 10:34:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 10:34:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 10:34:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 10:34:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 10:34:12] 
[2026-03-19 10:34:12] 2026-03-19 09:30:24,370 | INFO     | **************************************
[2026-03-19 10:34:12] 2026-03-19 09:30:24,872 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-03-19 10:34:12] 2026-03-19 09:30:24,887 | INFO     | sufficient remaining disk space (48009052160 B)
[2026-03-19 10:34:12] 2026-03-19 09:30:24,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 10:34:12] 2026-03-19 09:30:24,887 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 10:34:12] 2026-03-19 09:30:24,887 | INFO     | update_server=False
[2026-03-19 10:34:12] 2026-03-19 09:30:24,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 10:34:12] 2026-03-19 09:30:24,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 10:34:12] 2026-03-19 09:30:24,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 10:34:12] 2026-03-19 09:30:25,114 | INFO     | all data control threads have been joined
[2026-03-19 10:34:12] 2026-03-19 09:30:25,892 | INFO     | [job] retrieve thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:25,984 | INFO     | all payload control threads have been joined
[2026-03-19 10:34:12] 2026-03-19 09:30:26,083 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,119 | INFO     | [data] control thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,284 | INFO     | all job control threads have been joined
[2026-03-19 10:34:12] 2026-03-19 09:30:26,399 | INFO     | [payload] failed_post thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,433 | INFO     | [payload] validate_post thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,469 | INFO     | [job] validate thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,548 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,670 | INFO     | [data] copytool_in thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,744 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,904 | INFO     | [data] copytool_out thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:26,989 | INFO     | [payload] control thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:27,289 | INFO     | [job] control thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:27,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 10:34:12] 2026-03-19 09:30:28,541 | INFO     | [job] queue monitor thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:28,893 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:29,950 | WARNING  | process 2287788 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 10:34:12] 2026-03-19 09:30:30,281 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 10:34:12] 2026-03-19 09:30:30,767 | INFO     | number of running child processes to parent process 2287788: 1
[2026-03-19 10:34:12] 2026-03-19 09:30:30,767 | INFO     | maximum number of monitored processes: 6
[2026-03-19 10:34:12] 2026-03-19 09:30:30,767 | INFO     | aborting job monitoring since job object (job id=7056945087) has expired
[2026-03-19 10:34:12] 2026-03-19 09:30:30,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 10:34:12] 2026-03-19 09:30:30,767 | INFO     | will abort loop
[2026-03-19 10:34:12] 2026-03-19 09:30:31,772 | INFO     | [job] job monitor thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:35,843 | INFO     | job.realtimelogging is not enabled
[2026-03-19 10:34:12] 2026-03-19 09:30:36,848 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 10:34:12] 2026-03-19 09:30:55,577 | INFO     | PID=2273553 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 10:34:12] 2026-03-19 09:30:55,577 | INFO     | .. there are 38 such processes running
[2026-03-19 10:34:12] 2026-03-19 09:30:55,577 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 10:34:12] 2026-03-19 09:30:55,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 10:34:12] 2026-03-19 09:30:55,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 10:34:12] 2026-03-19 09:31:17,086 | INFO     | [monitor] cgroup control has ended
[2026-03-19 10:34:12] 2026-03-19 09:31:18,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22519702611776)>', '<ExcThread(monitor, started 22519385945856)>']
[2026-03-19 10:34:12] 2026-03-19 09:31:18,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 10:34:12] 2026-03-19 09:31:18,694 | INFO     | [monitor] control thread has ended
[2026-03-19 10:34:12] 2026-03-19 09:31:23,578 | INFO     | all workflow threads have been joined
[2026-03-19 10:34:12] 2026-03-19 09:31:23,578 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 10:34:12] 2026-03-19 09:31:23,578 | INFO     | traces error code: 0
[2026-03-19 10:34:12] 2026-03-19 09:31:23,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 10:34:12] 2026-03-19 09:31:23,807 [wrapper] ==== pilot stdout END ====
[2026-03-19 10:34:12] 2026-03-19 09:31:23,810 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 10:34:12] 2026-03-19 09:31:23,813 [wrapper] pilotpid: 2273553
[2026-03-19 10:34:12] 2026-03-19 09:31:23,815 [wrapper] Pilot exit status: 0
[2026-03-19 10:34:12] 2026-03-19 09:31:23,827 [wrapper] pandaids: 7056945087
[2026-03-19 10:34:12] 2026-03-19 09:31:23,972 [wrapper] cleanup supervisor_pilot 3262002 2273554
[2026-03-19 10:34:12] 2026-03-19 09:31:23,975 [wrapper] Test setup, not cleaning
[2026-03-19 10:34:12] 2026-03-19 09:31:23,976 [wrapper] apfmon messages muted
[2026-03-19 10:34:12] 2026-03-19 09:31:23,978 [wrapper] ==== wrapper stdout END ====
[2026-03-19 10:34:12] 2026-03-19 09:31:23,980 [wrapper] ==== wrapper stderr END ====
[2026-03-19 10:34:12]  *** Error codes and diagnostics ***
[2026-03-19 10:34:12]     "exeErrorCode": 0,
[2026-03-19 10:34:12]     "exeErrorDiag": "",
[2026-03-19 10:34:12]     "pilotErrorCode": 0,
[2026-03-19 10:34:12]     "pilotErrorDiag": "",
[2026-03-19 10:34:12]  *** Listing of results directory ***
[2026-03-19 10:34:12] total 478516
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:04 queuedata.json
[2026-03-19 10:34:12] -rwx------. 1 boinc boinc     36322 Mar 16 16:04 runpilot2-wrapper.sh
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc       100 Mar 19 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 10:34:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 06:36 run_atlas
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc       105 Mar 19 06:36 job.xml
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc      6709 Mar 19 06:36 init_data.xml
[2026-03-19 10:34:12] -rw-r--r--. 2 boinc boinc 237821567 Mar 19 06:36 EVNT.49130187._000001.pool.root.1
[2026-03-19 10:34:12] -rw-r--r--. 2 boinc boinc     15845 Mar 19 06:36 start_atlas.sh
[2026-03-19 10:34:12] drwxrwx--x. 2 boinc boinc      4096 Mar 19 06:36 shared
[2026-03-19 10:34:12] -rw-r--r--. 2 boinc boinc    597537 Mar 19 06:36 input.tar.gz
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc         0 Mar 19 06:36 boinc_lockfile
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc      2622 Mar 19 06:36 pandaJob.out
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc   1010817 Mar 19 06:36 agis_schedconf.cvmfs.json
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc       444 Mar 19 06:36 workernode_map.json
[2026-03-19 10:34:12] drwx------. 5 boinc boinc      4096 Mar 19 06:36 pilot3
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc 243530663 Mar 19 10:29 HITS.49178954._000010.pool.root.1
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc       528 Mar 19 10:30 boinc_task_state.xml
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc      1031 Mar 19 10:30 memory_monitor_summary.json
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc   1511579 Mar 19 10:30 agis_ddmendpoints.agis.ALL.json
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc    396342 Mar 19 10:30 log.49178954._000010.job.log.tgz.1
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc      6342 Mar 19 10:30 heartbeat.json
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc        95 Mar 19 10:30 pilot_heartbeat.json
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc      5435 Mar 19 10:31 pilotlog.txt
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc   1957321 Mar 19 10:31 log.49178954._000010.job.log.1
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc       357 Mar 19 10:31 output.list
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc       620 Mar 19 10:31 runtime_log
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc   2375680 Mar 19 10:31 result.tar.gz
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc      9222 Mar 19 10:31 runtime_log.err
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc       665 Mar 19 10:31 TuCODm4fOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmphxLDmUS60Ao.diag
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc        26 Mar 19 10:33 wrapper_checkpoint.txt
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc      8192 Mar 19 10:34 boinc_mmap_file
[2026-03-19 10:34:12] -rw-r--r--. 1 boinc boinc     20818 Mar 19 10:34 stderr.txt
[2026-03-19 10:34:12] HITS file was successfully produced:
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc 243530663 Mar 19 10:29 shared/HITS.pool.root.1
[2026-03-19 10:34:12]  *** Contents of shared directory: ***
[2026-03-19 10:34:12] total 473000
[2026-03-19 10:34:12] -rw-r--r--. 2 boinc boinc 237821567 Mar 19 06:36 ATLAS.root_0
[2026-03-19 10:34:12] -rw-r--r--. 2 boinc boinc     15845 Mar 19 06:36 start_atlas.sh
[2026-03-19 10:34:12] -rw-r--r--. 2 boinc boinc    597537 Mar 19 06:36 input.tar.gz
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc 243530663 Mar 19 10:29 HITS.pool.root.1
[2026-03-19 10:34:12] -rw-------. 1 boinc boinc   2375680 Mar 19 10:31 result.tar.gz
10:34:14 (2265878): run_atlas exited; CPU time 54900.086628
10:34:14 (2265878): called boinc_finish(0)

</stderr_txt>
]]>

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