Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:21:29 (3473119): wrapper (7.7.26015): starting
02:21:29 (3473119): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 02:21:29] Arguments: --nthreads 4
[2026-03-19 02:21:29] Threads: 4
[2026-03-19 02:21:29] Checking for CVMFS
[2026-03-19 02:21:29] No cvmfs_config command found, will try listing directly
[2026-03-19 02:21:29] CVMFS is ok
[2026-03-19 02:21:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:21:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:21:29] Further information can be found at the LHC@home message board.
[2026-03-19 02:21:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:21:29] Checking for apptainer binary...
[2026-03-19 02:21:29] which: no apptainer in ((null))
[2026-03-19 02:21:29] apptainer is not installed, using version from CVMFS
[2026-03-19 02:21:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:21:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot232/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-19 02:21:29] apptainer works
[2026-03-19 02:21:29] Set ATHENA_PROC_NUMBER=4
[2026-03-19 02:21:29] Set ATHENA_CORE_NUMBER=4
[2026-03-19 02:21:29] Starting ATLAS job with PandaID=7056916139
[2026-03-19 02:21:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot232/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 06:13:34]  *** The last 200 lines of the pilot log: ***
[2026-03-19 06:13:34] 2026-03-19 05:06:25,071 | INFO     | preparing for final server update for job 7056916139 in state='finished'
[2026-03-19 06:13:34] 2026-03-19 05:06:25,072 | INFO     | reading metadata from: /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7056916139/jobReport.json
[2026-03-19 06:13:34] 2026-03-19 05:06:25,074 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot232/slots/0/workernode_map.json
[2026-03-19 06:13:34] 2026-03-19 05:06:25,074 | INFO     | this job has now completed (state=finished)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,074 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,074 | INFO     | log transfer has been attempted: DONE
[2026-03-19 06:13:34] 2026-03-19 05:06:25,074 | INFO     | job 7056916139 has finished - writing final server update
[2026-03-19 06:13:34] 2026-03-19 05:06:25,074 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_651129/.job.ad'
[2026-03-19 06:13:34] 2026-03-19 05:06:25,074 | INFO     | total number of processed events: 400 (read)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,093 | INFO     | using path: /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7056916139/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,093 | INFO     | extracted standard info from prmon json
[2026-03-19 06:13:34] 2026-03-19 05:06:25,093 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 06:13:34] 2026-03-19 05:06:25,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 06:13:34] 2026-03-19 05:06:25,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 06:13:34] 2026-03-19 05:06:25,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 06:13:34] 2026-03-19 05:06:25,096 | INFO     | fitting pss+swap vs Time
[2026-03-19 06:13:34] 2026-03-19 05:06:25,096 | INFO     | sum of square deviations: 3346927870.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,097 | INFO     | sum of deviations: 20988463065.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,097 | INFO     | mean x: 1773890035.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,097 | INFO     | mean y: 2338065.556561086
[2026-03-19 06:13:34] 2026-03-19 05:06:25,097 | INFO     | intersect: -11121661891.146736
[2026-03-19 06:13:34] 2026-03-19 05:06:25,097 | INFO     | chi2: 1.0897749505658605
[2026-03-19 06:13:34] 2026-03-19 05:06:25,098 | INFO     | sum of square deviations: 3124858590.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,098 | INFO     | sum of deviations: 20446643740.999996
[2026-03-19 06:13:34] 2026-03-19 05:06:25,098 | INFO     | mean x: 1773889882.5
[2026-03-19 06:13:34] 2026-03-19 05:06:25,099 | INFO     | mean y: 2337693.3981481483
[2026-03-19 06:13:34] 2026-03-19 05:06:25,099 | INFO     | intersect: -11604617763.502014
[2026-03-19 06:13:34] 2026-03-19 05:06:25,099 | INFO     | chi2: 1.0902263860420487
[2026-03-19 06:13:34] 2026-03-19 05:06:25,099 | INFO     | current chi2=1.0902263860420487 (change=-0.041424651571757475 %)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,099 | INFO     | right removable region: 215
[2026-03-19 06:13:34] 2026-03-19 05:06:25,099 | INFO     | sum of square deviations: 3124858590.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,100 | INFO     | sum of deviations: -939614811.5
[2026-03-19 06:13:34] 2026-03-19 05:06:25,100 | INFO     | mean x: 1773890187.5
[2026-03-19 06:13:34] 2026-03-19 05:06:25,100 | INFO     | mean y: 2352914.7083333335
[2026-03-19 06:13:34] 2026-03-19 05:06:25,100 | INFO     | intersect: 535744569.4486242
[2026-03-19 06:13:34] 2026-03-19 05:06:25,100 | INFO     | chi2: 0.0016101584844526295
[2026-03-19 06:13:34] 2026-03-19 05:06:25,100 | INFO     | current chi2=0.0016101584844526295 (change=99.85224853226656 %)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,100 | INFO     | sum of square deviations: 2912836010.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | sum of deviations: -1338815373.000001
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | mean x: 1773890340.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | mean y: 2353199.952606635
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | intersect: 817679448.685778
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | chi2: 0.0013679153844196447
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | current chi2=0.0013679153844196447 (change=15.044674320697995 %)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | left removable region: 20
[2026-03-19 06:13:34] 2026-03-19 05:06:25,101 | INFO     | sum of square deviations: 2299168690.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,102 | INFO     | sum of deviations: -501558591.9999999
[2026-03-19 06:13:34] 2026-03-19 05:06:25,102 | INFO     | mean x: 1773890462.0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,102 | INFO     | mean y: 2352453.323076923
[2026-03-19 06:13:34] 2026-03-19 05:06:25,102 | INFO     | intersect: 389322755.3947136
[2026-03-19 06:13:34] 2026-03-19 05:06:25,102 | INFO     | chi2: 0.0009216827234115485
[2026-03-19 06:13:34] 2026-03-19 05:06:25,102 | INFO     | current memory leak: -0.22 B/s (using 195 data points, chi2=0.00)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | could have reported an average CPU frequency of 3577 MHz (11 samples)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | ..............................
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . Timing measurements:
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . get job = 0 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . initial setup = 5 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . payload setup = 7 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . stage-in = 0 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . payload execution = 13453 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . stage-out = 1 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | . log creation = 0 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,103 | INFO     | ..............................
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | 
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | job summary report
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | --------------------------------------------------
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | PanDA job id: 7056916139
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | task id: 49177170
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | errors: (none)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | pilot state: finished 
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | transexitcode: 0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | exeerrorcode: 0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | exeerrordiag: 
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | exitcode: 0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | exitmsg: OK
[2026-03-19 06:13:34] 2026-03-19 05:06:25,542 | INFO     | cpuconsumptiontime: 52034 s
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | nevents: 400
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | neventsw: 0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | pid: 3483526
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | pgrp: 3483526
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | corecount: 4
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | event service: False
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | sizes: {0: 2279940, 1: 2280344, 11: 2280344, 13464: 2310637, 13465: 2310636, 13466: 2319714, 13470: 2319898, 13472: 2320092}
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | --------------------------------------------------
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | 
[2026-03-19 06:13:34] 2026-03-19 05:06:25,543 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot232/slots/0
[2026-03-19 06:13:34] 2026-03-19 05:06:25,561 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | job 7056916139 has completed (purged errors)
[2026-03-19 06:13:34] 2026-03-19 05:06:25,562 | INFO     | overall cleanup function is called
[2026-03-19 06:13:34] 2026-03-19 05:06:26,569 | INFO     | --- collectZombieJob: --- 10, [3483526]
[2026-03-19 06:13:34] 2026-03-19 05:06:26,569 | INFO     | zombie collector waiting for pid 3483526
[2026-03-19 06:13:34] 2026-03-19 05:06:26,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 06:13:34] 2026-03-19 05:06:26,570 | INFO     | collected zombie processes
[2026-03-19 06:13:34] 2026-03-19 05:06:26,570 | INFO     | will attempt to kill all subprocesses of pid=3483526
[2026-03-19 06:13:34] 2026-03-19 05:06:27,065 | INFO     | process IDs to be killed: [3483526] (in reverse order)
[2026-03-19 06:13:34] 2026-03-19 05:06:27,296 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 06:13:34] 2026-03-19 05:06:27,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 06:13:34] 2026-03-19 05:06:27,327 | INFO     | did not find any defunct processes belonging to 3483526
[2026-03-19 06:13:34] 2026-03-19 05:06:27,358 | INFO     | did not find any defunct processes belonging to 3483526
[2026-03-19 06:13:34] 2026-03-19 05:06:27,358 | INFO     | ready for new job
[2026-03-19 06:13:34] 2026-03-19 05:06:27,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 06:13:34] 2026-03-19 05:06:27,360 | INFO     | **************************************
[2026-03-19 06:13:34] 2026-03-19 05:06:27,360 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 06:13:34] 2026-03-19 05:06:27,360 | INFO     | **************************************
[2026-03-19 06:13:34] 2026-03-19 05:06:27,360 | INFO     | 
[2026-03-19 06:13:34] 2026-03-19 05:06:27,366 | INFO     | architecture information:
[2026-03-19 06:13:34] 2026-03-19 05:06:27,366 | INFO     | executing command: cat /etc/os-release
[2026-03-19 06:13:34] 2026-03-19 05:06:27,380 | INFO     | cat /etc/os-release:
[2026-03-19 06:13:34] NAME="CentOS Linux"
[2026-03-19 06:13:34] VERSION="7 (Core)"
[2026-03-19 06:13:34] ID="centos"
[2026-03-19 06:13:34] ID_LIKE="rhel fedora"
[2026-03-19 06:13:34] VERSION_ID="7"
[2026-03-19 06:13:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 06:13:34] ANSI_COLOR="0;31"
[2026-03-19 06:13:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 06:13:34] HOME_URL="https://www.centos.org/"
[2026-03-19 06:13:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 06:13:34] 
[2026-03-19 06:13:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 06:13:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 06:13:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 06:13:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 06:13:34] 
[2026-03-19 06:13:34] 2026-03-19 05:06:27,380 | INFO     | **************************************
[2026-03-19 06:13:34] 2026-03-19 05:06:27,882 | INFO     | executing command: df -mP /var/lib/boinc/var/slot232/slots/0
[2026-03-19 06:13:34] 2026-03-19 05:06:27,902 | INFO     | sufficient remaining disk space (42422239232 B)
[2026-03-19 06:13:34] 2026-03-19 05:06:27,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 06:13:34] 2026-03-19 05:06:27,902 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 06:13:34] 2026-03-19 05:06:27,902 | INFO     | update_server=False
[2026-03-19 06:13:34] 2026-03-19 05:06:27,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 06:13:34] 2026-03-19 05:06:27,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 06:13:34] 2026-03-19 05:06:27,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:13:34] 2026-03-19 05:06:27,903 | INFO     | aborting loop
[2026-03-19 06:13:34] 2026-03-19 05:06:28,070 | INFO     | all data control threads have been joined
[2026-03-19 06:13:34] 2026-03-19 05:06:28,162 | INFO     | all payload control threads have been joined
[2026-03-19 06:13:34] 2026-03-19 05:06:28,427 | INFO     | all job control threads have been joined
[2026-03-19 06:13:34] 2026-03-19 05:06:28,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 06:13:34] 2026-03-19 05:06:28,907 | INFO     | [job] retrieve thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:28,908 | INFO     | [job] job monitor thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,075 | INFO     | [data] control thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,167 | INFO     | [payload] control thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,251 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,292 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,433 | INFO     | [job] control thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,562 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,908 | INFO     | [data] copytool_out thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,951 | INFO     | [payload] failed_post thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,968 | INFO     | [job] validate thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:29,976 | INFO     | [data] copytool_in thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:30,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:13:34] 2026-03-19 05:06:30,202 | INFO     | [payload] validate_post thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:31,163 | INFO     | [job] queue monitor thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:32,854 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:37,058 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-03-19 06:13:34] 2026-03-19 05:06:38,774 | INFO     | job.realtimelogging is not enabled
[2026-03-19 06:13:34] 2026-03-19 05:06:39,781 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 06:13:34] 2026-03-19 05:06:58,565 | INFO     | PID=3477660 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 06:13:34] 2026-03-19 05:06:58,565 | INFO     | .. there are 40 such processes running
[2026-03-19 06:13:34] 2026-03-19 05:06:58,565 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 06:13:34] 2026-03-19 05:06:58,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 06:13:34] 2026-03-19 05:06:58,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 06:13:34] 2026-03-19 05:07:04,490 | INFO     | [monitor] cgroup control has ended
[2026-03-19 06:13:34] 2026-03-19 05:07:05,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23159042434880)>', '<ExcThread(monitor, started 23158806824704)>']
[2026-03-19 06:13:34] 2026-03-19 05:07:06,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 06:13:34] 2026-03-19 05:07:06,604 | INFO     | [monitor] control thread has ended
[2026-03-19 06:13:34] 2026-03-19 05:07:10,718 | INFO     | all workflow threads have been joined
[2026-03-19 06:13:34] 2026-03-19 05:07:10,718 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 06:13:34] 2026-03-19 05:07:10,718 | INFO     | traces error code: 0
[2026-03-19 06:13:34] 2026-03-19 05:07:10,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 06:13:34] 2026-03-19 05:07:10,945 [wrapper] ==== pilot stdout END ====
[2026-03-19 06:13:34] 2026-03-19 05:07:10,948 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 06:13:34] 2026-03-19 05:07:10,950 [wrapper] pilotpid: 3477660
[2026-03-19 06:13:34] 2026-03-19 05:07:10,952 [wrapper] Pilot exit status: 0
[2026-03-19 06:13:34] 2026-03-19 05:07:10,960 [wrapper] pandaids: 7056916139
[2026-03-19 06:13:34] 2026-03-19 05:07:11,104 [wrapper] cleanup supervisor_pilot  317304 3477661
[2026-03-19 06:13:34] 2026-03-19 05:07:11,106 [wrapper] Test setup, not cleaning
[2026-03-19 06:13:34] 2026-03-19 05:07:11,108 [wrapper] apfmon messages muted
[2026-03-19 06:13:34] 2026-03-19 05:07:11,109 [wrapper] ==== wrapper stdout END ====
[2026-03-19 06:13:34] 2026-03-19 05:07:11,110 [wrapper] ==== wrapper stderr END ====
[2026-03-19 06:13:34]  *** Error codes and diagnostics ***
[2026-03-19 06:13:34]     "exeErrorCode": 0,
[2026-03-19 06:13:34]     "exeErrorDiag": "",
[2026-03-19 06:13:34]     "pilotErrorCode": 0,
[2026-03-19 06:13:34]     "pilotErrorDiag": "",
[2026-03-19 06:13:34]  *** Listing of results directory ***
[2026-03-19 06:13:34] total 484124
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-19 06:13:34] -rwx------. 1 boinc boinc     36322 Mar 16 14:32 runpilot2-wrapper.sh
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc       100 Mar 19 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 06:13:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 02:21 run_atlas
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc       105 Mar 19 02:21 job.xml
[2026-03-19 06:13:34] -rw-r--r--. 2 boinc boinc 242540139 Mar 19 02:21 EVNT.49136756._000004.pool.root.1
[2026-03-19 06:13:34] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:21 start_atlas.sh
[2026-03-19 06:13:34] drwxrwx--x. 2 boinc boinc      4096 Mar 19 02:21 shared
[2026-03-19 06:13:34] -rw-r--r--. 2 boinc boinc    596135 Mar 19 02:21 input.tar.gz
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc      6708 Mar 19 02:21 init_data.xml
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc         0 Mar 19 02:21 boinc_lockfile
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc      2618 Mar 19 02:21 pandaJob.out
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc      5111 Mar 19 02:21 queuedata.json
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc   1010446 Mar 19 02:21 agis_schedconf.cvmfs.json
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc       444 Mar 19 02:21 workernode_map.json
[2026-03-19 06:13:34] drwx------. 5 boinc boinc      4096 Mar 19 02:21 pilot3
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc       529 Mar 19 06:05 boinc_task_state.xml
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc 244748511 Mar 19 06:05 HITS.49177170._000076.pool.root.1
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc        95 Mar 19 06:05 pilot_heartbeat.json
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc      1029 Mar 19 06:06 memory_monitor_summary.json
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc   1511579 Mar 19 06:06 agis_ddmendpoints.agis.ALL.json
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc    375426 Mar 19 06:06 log.49177170._000076.job.log.tgz.1
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc      6353 Mar 19 06:06 heartbeat.json
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc      4902 Mar 19 06:07 pilotlog.txt
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc   1883608 Mar 19 06:07 log.49177170._000076.job.log.1
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc       357 Mar 19 06:07 output.list
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc       620 Mar 19 06:07 runtime_log
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc   2273280 Mar 19 06:07 result.tar.gz
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc      9222 Mar 19 06:07 runtime_log.err
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc       665 Mar 19 06:07 RFaKDmtENM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmS1tLDms95BDn.diag
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc        27 Mar 19 06:13 wrapper_checkpoint.txt
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc      8192 Mar 19 06:13 boinc_mmap_file
[2026-03-19 06:13:34] -rw-r--r--. 1 boinc boinc     21149 Mar 19 06:13 stderr.txt
[2026-03-19 06:13:34] HITS file was successfully produced:
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc 244748511 Mar 19 06:05 shared/HITS.pool.root.1
[2026-03-19 06:13:34]  *** Contents of shared directory: ***
[2026-03-19 06:13:34] total 478700
[2026-03-19 06:13:34] -rw-r--r--. 2 boinc boinc 242540139 Mar 19 02:21 ATLAS.root_0
[2026-03-19 06:13:34] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:21 start_atlas.sh
[2026-03-19 06:13:34] -rw-r--r--. 2 boinc boinc    596135 Mar 19 02:21 input.tar.gz
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc 244748511 Mar 19 06:05 HITS.pool.root.1
[2026-03-19 06:13:34] -rw-------. 1 boinc boinc   2273280 Mar 19 06:07 result.tar.gz
06:13:35 (3473119): run_atlas exited; CPU time 52720.492295
06:13:35 (3473119): called boinc_finish(0)

</stderr_txt>
]]>

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