Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:56:37 (21846): wrapper (7.7.26015): starting
15:56:37 (21846): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 15:56:37] Arguments: --nthreads 8
[2026-03-16 15:56:37] Threads: 8
[2026-03-16 15:56:37] Checking for CVMFS
[2026-03-16 15:56:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 15:56:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 15:56:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 15:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 15:56:41] 2.11.2.0 20655 130602 139092 157351 0 176 19045513 25165824 4742 130560 155 40011768 99.835 27025720 969 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-16 15:56:41] CVMFS is ok
[2026-03-16 15:56:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 15:56:41] Checking for apptainer binary...
[2026-03-16 15:56:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 15:56:41] Running /usr/bin/apptainer --version
[2026-03-16 15:56:42] apptainer version 1.3.2-1.el7
[2026-03-16 15:56:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 15:56:45] cg-vwn401.simple-grid.lan
[2026-03-16 15:56:45] apptainer works
[2026-03-16 15:56:45] Set ATHENA_PROC_NUMBER=8
[2026-03-16 15:56:45] Set ATHENA_CORE_NUMBER=8
[2026-03-16 15:56:45] Starting ATLAS job with PandaID=7038578464
[2026-03-16 15:56:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 19:12:29]  *** The last 200 lines of the pilot log: ***
[2026-03-16 19:12:29] 2026-03-16 18:11:26,549 | INFO     | log transfer has been attempted: DONE
[2026-03-16 19:12:29] 2026-03-16 18:11:26,549 | INFO     | job 7038578464 has finished - writing final server update
[2026-03-16 19:12:29] 2026-03-16 18:11:26,550 | INFO     | total number of processed events: 400 (read)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,552 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7038578464/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,552 | INFO     | extracted standard info from prmon json
[2026-03-16 19:12:29] 2026-03-16 18:11:26,553 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 19:12:29] 2026-03-16 18:11:26,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 19:12:29] 2026-03-16 18:11:26,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 19:12:29] 2026-03-16 18:11:26,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 19:12:29] 2026-03-16 18:11:26,557 | INFO     | fitting pss+swap vs Time
[2026-03-16 19:12:29] 2026-03-16 18:11:26,558 | INFO     | sum of square deviations: 1869302025.5
[2026-03-16 19:12:29] 2026-03-16 18:11:26,559 | INFO     | sum of deviations: 75978600081.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,560 | INFO     | mean x: 1773679095.5
[2026-03-16 19:12:29] 2026-03-16 18:11:26,560 | INFO     | mean y: 2678545.8791208793
[2026-03-16 19:12:29] 2026-03-16 18:11:26,560 | INFO     | intersect: -72089285636.83679
[2026-03-16 19:12:29] 2026-03-16 18:11:26,560 | INFO     | chi2: 5.27543123846478
[2026-03-16 19:12:29] 2026-03-16 18:11:26,561 | INFO     | sum of square deviations: 1719429448.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,562 | INFO     | sum of deviations: 86906041810.00002
[2026-03-16 19:12:29] 2026-03-16 18:11:26,562 | INFO     | mean x: 1773678943.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,562 | INFO     | mean y: 2689363.107344633
[2026-03-16 19:12:29] 2026-03-16 18:11:26,563 | INFO     | intersect: -89645313674.86008
[2026-03-16 19:12:29] 2026-03-16 18:11:26,563 | INFO     | chi2: 4.546971798586567
[2026-03-16 19:12:29] 2026-03-16 18:11:26,563 | INFO     | current chi2=4.546971798586567 (change=13.808528761910358 %)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,563 | INFO     | right removable region: 176
[2026-03-16 19:12:29] 2026-03-16 18:11:26,564 | INFO     | sum of square deviations: 1719429448.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,565 | INFO     | sum of deviations: 12601000336.000002
[2026-03-16 19:12:29] 2026-03-16 18:11:26,565 | INFO     | mean x: 1773679248.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,565 | INFO     | mean y: 2742901.813559322
[2026-03-16 19:12:29] 2026-03-16 18:11:26,565 | INFO     | intersect: -12995832192.966505
[2026-03-16 19:12:29] 2026-03-16 18:11:26,566 | INFO     | chi2: 1.2898308607474407
[2026-03-16 19:12:29] 2026-03-16 18:11:26,569 | INFO     | current chi2=1.2898308607474407 (change=75.55022893023626 %)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,570 | INFO     | sum of square deviations: 1577789583.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,571 | INFO     | sum of deviations: -7149096849.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,571 | INFO     | mean x: 1773679400.5
[2026-03-16 19:12:29] 2026-03-16 18:11:26,571 | INFO     | mean y: 2763971.1279069767
[2026-03-16 19:12:29] 2026-03-16 18:11:26,571 | INFO     | intersect: 8039454002.469531
[2026-03-16 19:12:29] 2026-03-16 18:11:26,572 | INFO     | chi2: 0.7925006400989593
[2026-03-16 19:12:29] 2026-03-16 18:11:26,572 | INFO     | current chi2=0.7925006400989593 (change=38.55778581389228 %)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,572 | INFO     | sum of square deviations: 1444149868.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,573 | INFO     | sum of deviations: -8629884598.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,574 | INFO     | mean x: 1773679553.0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,574 | INFO     | mean y: 2765653.041916168
[2026-03-16 19:12:29] 2026-03-16 18:11:26,574 | INFO     | intersect: 10601838640.820095
[2026-03-16 19:12:29] 2026-03-16 18:11:26,574 | INFO     | chi2: 0.7904603858893261
[2026-03-16 19:12:29] 2026-03-16 18:11:26,574 | INFO     | current chi2=0.7904603858893261 (change=0.2574451181993238 %)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,574 | INFO     | left removable region: 30
[2026-03-16 19:12:29] 2026-03-16 18:11:26,575 | INFO     | sum of square deviations: 964976232.5
[2026-03-16 19:12:29] 2026-03-16 18:11:26,576 | INFO     | sum of deviations: 1593349798.5000002
[2026-03-16 19:12:29] 2026-03-16 18:11:26,576 | INFO     | mean x: 1773679827.5
[2026-03-16 19:12:29] 2026-03-16 18:11:26,576 | INFO     | mean y: 2782882.48630137
[2026-03-16 19:12:29] 2026-03-16 18:11:26,576 | INFO     | intersect: -2925882405.39232
[2026-03-16 19:12:29] 2026-03-16 18:11:26,577 | INFO     | chi2: 0.00020050025567679361
[2026-03-16 19:12:29] 2026-03-16 18:11:26,577 | INFO     | current memory leak: 1.65 B/s (using 146 data points, chi2=0.00)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,577 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,577 | INFO     | ..............................
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . Timing measurements:
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . get job = 0 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . initial setup = 103 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . payload setup = 127 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . stage-in = 0 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . payload execution = 11207 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . stage-out = 10 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | . log creation = 1 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,578 | INFO     | ..............................
[2026-03-16 19:12:29] 2026-03-16 18:11:26,719 | INFO     | 
[2026-03-16 19:12:29] 2026-03-16 18:11:26,719 | INFO     | job summary report
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | --------------------------------------------------
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | PanDA job id: 7038578464
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | task id: 48700858
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | errors: (none)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | pilot state: finished 
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | transexitcode: 0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,720 | INFO     | exeerrorcode: 0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | exeerrordiag: 
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | exitcode: 0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | exitmsg: OK
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | cpuconsumptiontime: 42880 s
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | nevents: 400
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | neventsw: 0
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | pid: 30526
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | pgrp: 30526
[2026-03-16 19:12:29] 2026-03-16 18:11:26,721 | INFO     | corecount: 8
[2026-03-16 19:12:29] 2026-03-16 18:11:26,722 | INFO     | event service: False
[2026-03-16 19:12:29] 2026-03-16 18:11:26,722 | INFO     | sizes: {0: 2279638, 1: 2280095, 2: 2280155, 12: 2280183, 11339: 2309401, 11340: 2309400, 11351: 2318584, 11352: 2318640, 11354: 2318834}
[2026-03-16 19:12:29] 2026-03-16 18:11:26,722 | INFO     | --------------------------------------------------
[2026-03-16 19:12:29] 2026-03-16 18:11:26,722 | INFO     | 
[2026-03-16 19:12:29] 2026-03-16 18:11:26,722 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-16 19:12:29] 2026-03-16 18:11:26,982 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,982 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,982 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,985 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 19:12:29] 2026-03-16 18:11:26,985 | INFO     | job 7038578464 has completed (purged errors)
[2026-03-16 19:12:29] 2026-03-16 18:11:26,985 | INFO     | overall cleanup function is called
[2026-03-16 19:12:29] 2026-03-16 18:11:27,993 | INFO     | --- collectZombieJob: --- 10, [30526]
[2026-03-16 19:12:29] 2026-03-16 18:11:27,993 | INFO     | zombie collector waiting for pid 30526
[2026-03-16 19:12:29] 2026-03-16 18:11:27,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 19:12:29] 2026-03-16 18:11:27,994 | INFO     | collected zombie processes
[2026-03-16 19:12:29] 2026-03-16 18:11:27,994 | INFO     | will attempt to kill all subprocesses of pid=30526
[2026-03-16 19:12:29] 2026-03-16 18:11:28,126 | INFO     | process IDs to be killed: [30526] (in reverse order)
[2026-03-16 19:12:29] 2026-03-16 18:11:28,183 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 19:12:29] 2026-03-16 18:11:28,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 19:12:29] 2026-03-16 18:11:28,187 | INFO     | did not find any defunct processes belonging to 30526
[2026-03-16 19:12:29] 2026-03-16 18:11:28,190 | INFO     | did not find any defunct processes belonging to 30526
[2026-03-16 19:12:29] 2026-03-16 18:11:28,191 | INFO     | ready for new job
[2026-03-16 19:12:29] 2026-03-16 18:11:28,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 19:12:29] 2026-03-16 18:11:28,193 | INFO     | **************************************
[2026-03-16 19:12:29] 2026-03-16 18:11:28,193 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 19:12:29] 2026-03-16 18:11:28,193 | INFO     | **************************************
[2026-03-16 19:12:29] 2026-03-16 18:11:28,193 | INFO     | 
[2026-03-16 19:12:29] 2026-03-16 18:11:28,194 | INFO     | pilot is running in a VM
[2026-03-16 19:12:29] 2026-03-16 18:11:28,194 | INFO     | architecture information:
[2026-03-16 19:12:29] 2026-03-16 18:11:28,195 | INFO     | executing command: cat /etc/os-release
[2026-03-16 19:12:29] 2026-03-16 18:11:28,370 | INFO     | cat /etc/os-release:
[2026-03-16 19:12:29] NAME="CentOS Linux"
[2026-03-16 19:12:29] VERSION="7 (Core)"
[2026-03-16 19:12:29] ID="centos"
[2026-03-16 19:12:29] ID_LIKE="rhel fedora"
[2026-03-16 19:12:29] VERSION_ID="7"
[2026-03-16 19:12:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 19:12:29] ANSI_COLOR="0;31"
[2026-03-16 19:12:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 19:12:29] HOME_URL="https://www.centos.org/"
[2026-03-16 19:12:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 19:12:29] 
[2026-03-16 19:12:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 19:12:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 19:12:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 19:12:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 19:12:29] 
[2026-03-16 19:12:29] 2026-03-16 18:11:28,370 | INFO     | **************************************
[2026-03-16 19:12:29] 2026-03-16 18:11:28,873 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-16 19:12:29] 2026-03-16 18:11:29,147 | INFO     | sufficient remaining disk space (495458451456 B)
[2026-03-16 19:12:29] 2026-03-16 18:11:29,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 19:12:29] 2026-03-16 18:11:29,148 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 19:12:29] 2026-03-16 18:11:29,148 | INFO     | update_server=False
[2026-03-16 19:12:29] 2026-03-16 18:11:29,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 19:12:29] 2026-03-16 18:11:29,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 19:12:29] 2026-03-16 18:11:29,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 19:12:29] 2026-03-16 18:11:29,149 | INFO     | aborting loop
[2026-03-16 19:12:29] 2026-03-16 18:11:29,157 | INFO     | all job control threads have been joined
[2026-03-16 19:12:29] 2026-03-16 18:11:29,555 | INFO     | all data control threads have been joined
[2026-03-16 19:12:29] 2026-03-16 18:11:30,154 | INFO     | [job] retrieve thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,155 | INFO     | [job] job monitor thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,163 | INFO     | [job] control thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,164 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,186 | INFO     | [job] validate thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,218 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,455 | INFO     | all payload control threads have been joined
[2026-03-16 19:12:29] 2026-03-16 18:11:30,545 | INFO     | [data] copytool_in thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,562 | INFO     | [data] control thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:30,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 19:12:29] 2026-03-16 18:11:30,854 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:31,155 | INFO     | [data] copytool_out thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:31,215 | INFO     | [payload] validate_post thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:31,461 | INFO     | [payload] control thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:31,554 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:31,684 | INFO     | [payload] failed_post thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:31,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 19:12:29] 2026-03-16 18:11:32,739 | INFO     | [job] queue monitor thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:34,834 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 19:12:29] 2026-03-16 18:11:59,478 | INFO     | PID=25942 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-16 19:12:29] 2026-03-16 18:11:59,479 | INFO     | .. there are 9 such processes running
[2026-03-16 19:12:29] 2026-03-16 18:11:59,479 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 19:12:29] 2026-03-16 18:11:59,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 19:12:29] 2026-03-16 18:11:59,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 19:12:29] 2026-03-16 18:12:18,672 | INFO     | [monitor] cgroup control has ended
[2026-03-16 19:12:29] 2026-03-16 18:12:20,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073140668224)>', '<ExcThread(monitor, started 140072922343168)>']
[2026-03-16 19:12:29] 2026-03-16 18:12:20,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 19:12:29] 2026-03-16 18:12:20,606 | INFO     | [monitor] control thread has ended
[2026-03-16 19:12:29] 2026-03-16 18:12:25,214 | INFO     | all workflow threads have been joined
[2026-03-16 19:12:29] 2026-03-16 18:12:25,214 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 19:12:29] 2026-03-16 18:12:25,215 | INFO     | traces error code: 0
[2026-03-16 19:12:29] 2026-03-16 18:12:25,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 19:12:29] 2026-03-16 18:12:25,363 [wrapper] ==== pilot stdout END ====
[2026-03-16 19:12:29] 2026-03-16 18:12:25,383 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 19:12:29] 2026-03-16 18:12:25,453 [wrapper] pilotpid: 25942
[2026-03-16 19:12:29] 2026-03-16 18:12:25,566 [wrapper] Pilot exit status: 0
[2026-03-16 19:12:29] 2026-03-16 18:12:25,936 [wrapper] pandaids: 7038578464
[2026-03-16 19:12:29] 2026-03-16 18:12:26,760 [wrapper] cleanup supervisor_pilot  5368 25943
[2026-03-16 19:12:29] 2026-03-16 18:12:26,772 [wrapper] Test setup, not cleaning
[2026-03-16 19:12:29] 2026-03-16 18:12:26,777 [wrapper] apfmon messages muted
[2026-03-16 19:12:29] 2026-03-16 18:12:26,794 [wrapper] ==== wrapper stdout END ====
[2026-03-16 19:12:29] 2026-03-16 18:12:26,810 [wrapper] ==== wrapper stderr END ====
[2026-03-16 19:12:29]  *** Error codes and diagnostics ***
[2026-03-16 19:12:29]     "exeErrorCode": 0,
[2026-03-16 19:12:29]     "exeErrorDiag": "",
[2026-03-16 19:12:29]     "pilotErrorCode": 0,
[2026-03-16 19:12:29]     "pilotErrorDiag": "",
[2026-03-16 19:12:29]  *** Listing of results directory ***
[2026-03-16 19:12:29] total 340244
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc    584627 Mar  4 10:32 pilot3.tar.gz
[2026-03-16 19:12:29] -rwx------. 1 boinc boinc     36322 Mar  4 10:32 runpilot2-wrapper.sh
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc      5111 Mar  4 10:32 queuedata.json
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc       100 Mar 16 15:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 19:12:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 15:56 run_atlas
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc       105 Mar 16 15:56 job.xml
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc      6392 Mar 16 15:56 init_data.xml
[2026-03-16 19:12:29] -rw-r--r--. 2 boinc boinc 190934809 Mar 16 15:56 EVNT.48700856._000128.pool.root.1
[2026-03-16 19:12:29] -rw-r--r--. 2 boinc boinc     15845 Mar 16 15:56 start_atlas.sh
[2026-03-16 19:12:29] drwxrwx--x. 2 boinc boinc        68 Mar 16 15:56 shared
[2026-03-16 19:12:29] -rw-r--r--. 2 boinc boinc    597932 Mar 16 15:56 input.tar.gz
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc         0 Mar 16 15:56 boinc_lockfile
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc      2520 Mar 16 15:56 pandaJob.out
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc       415 Mar 16 16:01 workernode_map.json
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc   1006429 Mar 16 16:01 agis_schedconf.cvmfs.json
[2026-03-16 19:12:29] drwx------. 5 boinc boinc      4096 Mar 16 16:02 pilot3
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc 149534786 Mar 16 19:10 HITS.48700858._003273.pool.root.1
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc       531 Mar 16 19:10 boinc_task_state.xml
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc      1008 Mar 16 19:11 memory_monitor_summary.json
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc   1511579 Mar 16 19:11 agis_ddmendpoints.agis.ALL.json
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc    406759 Mar 16 19:11 log.48700858._003273.job.log.tgz.1
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc      6310 Mar 16 19:11 heartbeat.json
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc        95 Mar 16 19:11 pilot_heartbeat.json
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc        28 Mar 16 19:12 wrapper_checkpoint.txt
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc      8192 Mar 16 19:12 boinc_mmap_file
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc      4881 Mar 16 19:12 pilotlog.txt
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc   1604447 Mar 16 19:12 log.48700858._003273.job.log.1
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc       357 Mar 16 19:12 output.list
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc       620 Mar 16 19:12 runtime_log
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc   2027520 Mar 16 19:12 result.tar.gz
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc      8832 Mar 16 19:12 runtime_log.err
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc       654 Mar 16 19:12 JDPODmCmxH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwzHLDmQI6I3n.diag
[2026-03-16 19:12:29] -rw-r--r--. 1 boinc boinc     20724 Mar 16 19:12 stderr.txt
[2026-03-16 19:12:29] HITS file was successfully produced:
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc 149534786 Mar 16 19:10 shared/HITS.pool.root.1
[2026-03-16 19:12:29]  *** Contents of shared directory: ***
[2026-03-16 19:12:29] total 335072
[2026-03-16 19:12:29] -rw-r--r--. 2 boinc boinc 190934809 Mar 16 15:56 ATLAS.root_0
[2026-03-16 19:12:29] -rw-r--r--. 2 boinc boinc     15845 Mar 16 15:56 start_atlas.sh
[2026-03-16 19:12:29] -rw-r--r--. 2 boinc boinc    597932 Mar 16 15:56 input.tar.gz
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc 149534786 Mar 16 19:10 HITS.pool.root.1
[2026-03-16 19:12:29] -rw-------. 1 boinc boinc   2027520 Mar 16 19:12 result.tar.gz
19:12:30 (21846): run_atlas exited; CPU time 43045.281480
19:12:30 (21846): called boinc_finish(0)

</stderr_txt>
]]>

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