Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:12:06 (917868): wrapper (7.7.26015): starting
02:12:06 (917868): wrapper: running run_atlas (--nthreads 2)
[2026-03-17 02:12:06] Arguments: --nthreads 2
[2026-03-17 02:12:06] Threads: 2
[2026-03-17 02:12:06] Checking for CVMFS
[2026-03-17 02:12:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 02:12:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 02:12:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 02:12:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 02:12:06] 2.9.2.0 867299 2158 63000 157351 0 252 28497154 36864000 0 130560 0 203900 99.965 48053 9356 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-17 02:12:06] CVMFS is ok
[2026-03-17 02:12:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 02:12:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 02:12:06] Further information can be found at the LHC@home message board.
[2026-03-17 02:12:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 02:12:06] Checking for apptainer binary...
[2026-03-17 02:12:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 02:12:06] Running /usr/bin/apptainer --version
[2026-03-17 02:12:06] apptainer version 1.4.1-1.1
[2026-03-17 02:12:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 02:12:06] thA337
[2026-03-17 02:12:06] apptainer works
[2026-03-17 02:12:06] Set ATHENA_PROC_NUMBER=2
[2026-03-17 02:12:06] Set ATHENA_CORE_NUMBER=2
[2026-03-17 02:12:06] Starting ATLAS job with PandaID=7056944751
[2026-03-17 02:12:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 08:18:06]  *** The last 200 lines of the pilot log: ***
[2026-03-17 08:18:06] 2026-03-17 07:17:08,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 08:18:06] 2026-03-17 07:17:08,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 08:18:06] 2026-03-17 07:17:08,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 08:18:06] 2026-03-17 07:17:08,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 08:18:06] 2026-03-17 07:17:08,914 | INFO     | aborting loop
[2026-03-17 08:18:06] 2026-03-17 07:17:09,157 | INFO     | all data control threads have been joined
[2026-03-17 08:18:06] 2026-03-17 07:17:09,295 | INFO     | all payload control threads have been joined
[2026-03-17 08:18:06] 2026-03-17 07:17:09,919 | INFO     | [job] retrieve thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:09,920 | INFO     | [job] queue monitor thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:09,921 | INFO     | [job] job monitor thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,101 | INFO     | all job control threads have been joined
[2026-03-17 08:18:06] 2026-03-17 07:17:10,164 | INFO     | [data] control thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,237 | INFO     | [job] validate thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,300 | INFO     | [payload] control thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,352 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,379 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,503 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,607 | INFO     | [data] copytool_in thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,910 | INFO     | [payload] validate_post thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:10,919 | INFO     | [data] copytool_out thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:11,107 | INFO     | [job] control thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:11,114 | INFO     | [payload] failed_post thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:11,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 08:18:06] 2026-03-17 07:17:15,185 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:19,270 | INFO     | job.realtimelogging is not enabled
[2026-03-17 08:18:06] 2026-03-17 07:17:20,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 08:18:06] 2026-03-17 07:17:38,878 | INFO     | PID=921896 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-17 08:18:06] 2026-03-17 07:17:38,878 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 08:18:06] 2026-03-17 07:17:38,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 08:18:06] 2026-03-17 07:17:38,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 08:18:06] 2026-03-17 07:18:00,473 | INFO     | [monitor] cgroup control has ended
[2026-03-17 08:18:06] 2026-03-17 07:18:01,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275777865536)>', '<ExcThread(monitor, started 140275259250432)>']
[2026-03-17 08:18:06] 2026-03-17 07:18:01,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 08:18:06] 2026-03-17 07:18:01,999 | INFO     | [monitor] control thread has ended
[2026-03-17 08:18:06] 2026-03-17 07:18:06,458 | INFO     | all workflow threads have been joined
[2026-03-17 08:18:06] 2026-03-17 07:18:06,458 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 08:18:06] 2026-03-17 07:18:06,459 | INFO     | traces error code: 0
[2026-03-17 08:18:06] 2026-03-17 07:18:06,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 08:18:06] 2026-03-17 07:18:06,503 [wrapper] ==== pilot stdout END ====
[2026-03-17 08:18:06] 2026-03-17 07:18:06,506 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 08:18:06] 2026-03-17 07:18:06,508 [wrapper] pilotpid: 921896
[2026-03-17 08:18:06] 2026-03-17 07:18:06,510 [wrapper] Pilot exit status: 0
[2026-03-17 08:18:06] 2026-03-17 07:18:06,516 [wrapper] pandaids: 7056944751
[2026-03-17 08:18:06] 2026-03-17 07:18:06,529 [wrapper] cleanup supervisor_pilot  933379 921897
[2026-03-17 08:18:06] 2026-03-17 07:18:06,531 [wrapper] Test setup, not cleaning
[2026-03-17 08:18:06] 2026-03-17 07:18:06,534 [wrapper] apfmon messages muted
[2026-03-17 08:18:06] 2026-03-17 07:18:06,536 [wrapper] ==== wrapper stdout END ====
[2026-03-17 08:18:06] 2026-03-17 07:18:06,538 [wrapper] ==== wrapper stderr END ====
[2026-03-17 08:18:06]  *** Error codes and diagnostics ***
[2026-03-17 08:18:06]     "exeErrorCode": 0,
[2026-03-17 08:18:06]     "exeErrorDiag": "",
[2026-03-17 08:18:06]     "pilotErrorCode": 0,
[2026-03-17 08:18:06]     "pilotErrorDiag": "",
[2026-03-17 08:18:06]  *** Listing of results directory ***
[2026-03-17 08:18:06] total 489668
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc    585013 Mar 16 15:08 pilot3.tar.gz
[2026-03-17 08:18:06] -rwx------ 1 boinc boinc     36322 Mar 16 15:08 runpilot2-wrapper.sh
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc      5111 Mar 16 15:10 queuedata.json
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc       100 Mar 17 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 08:18:06] -rwxr-xr-x 1 boinc boinc      7986 Mar 17 02:12 run_atlas
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc       105 Mar 17 02:12 job.xml
[2026-03-17 08:18:06] -rw-r--r-- 2 boinc boinc 248084481 Mar 17 02:12 EVNT.49129889._000014.pool.root.1
[2026-03-17 08:18:06] -rw-r--r-- 2 boinc boinc    597554 Mar 17 02:12 input.tar.gz
[2026-03-17 08:18:06] -rw-r--r-- 2 boinc boinc     15845 Mar 17 02:12 start_atlas.sh
[2026-03-17 08:18:06] drwxrwx--x 2 boinc boinc      4096 Mar 17 02:12 shared
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc         0 Mar 17 02:12 boinc_setup_complete
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc      6205 Mar 17 02:12 init_data.xml
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc         0 Mar 17 02:12 boinc_lockfile
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc      2660 Mar 17 02:12 pandaJob.out
[2026-03-17 08:18:06] -rw------- 1 boinc boinc   1006429 Mar 17 02:12 agis_schedconf.cvmfs.json
[2026-03-17 08:18:06] -rw------- 1 boinc boinc       419 Mar 17 02:12 workernode_map.json
[2026-03-17 08:18:06] drwx------ 5 boinc boinc      4096 Mar 17 02:12 pilot3
[2026-03-17 08:18:06] -rw------- 1 boinc boinc 242350433 Mar 17 08:16 HITS.49178853._000340.pool.root.1
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc       530 Mar 17 08:16 boinc_task_state.xml
[2026-03-17 08:18:06] -rw------- 1 boinc boinc      1019 Mar 17 08:16 memory_monitor_summary.json
[2026-03-17 08:18:06] -rw------- 1 boinc boinc        95 Mar 17 08:17 pilot_heartbeat.json
[2026-03-17 08:18:06] -rw------- 1 boinc boinc   1511579 Mar 17 08:17 agis_ddmendpoints.agis.ALL.json
[2026-03-17 08:18:06] -rw------- 1 boinc boinc    474739 Mar 17 08:17 log.49178853._000340.job.log.tgz.1
[2026-03-17 08:18:06] -rw------- 1 boinc boinc      6295 Mar 17 08:17 heartbeat.json
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc      8192 Mar 17 08:17 boinc_mmap_file
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc        28 Mar 17 08:17 wrapper_checkpoint.txt
[2026-03-17 08:18:06] -rw------- 1 boinc boinc      4819 Mar 17 08:18 pilotlog.txt
[2026-03-17 08:18:06] -rw------- 1 boinc boinc   3058929 Mar 17 08:18 log.49178853._000340.job.log.1
[2026-03-17 08:18:06] -rw------- 1 boinc boinc       357 Mar 17 08:18 output.list
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc       620 Mar 17 08:18 runtime_log
[2026-03-17 08:18:06] -rw------- 1 boinc boinc   3553280 Mar 17 08:18 result.tar.gz
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc      8897 Mar 17 08:18 runtime_log.err
[2026-03-17 08:18:06] -rw------- 1 boinc boinc       661 Mar 17 08:18 TgvMDmnnNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWdxLDm6L1Rrn.diag
[2026-03-17 08:18:06] -rw-r--r-- 1 boinc boinc      7424 Mar 17 08:18 stderr.txt
[2026-03-17 08:18:06] HITS file was successfully produced:
[2026-03-17 08:18:06] -rw------- 1 boinc boinc 242350433 Mar 17 08:16 shared/HITS.pool.root.1
[2026-03-17 08:18:06]  *** Contents of shared directory: ***
[2026-03-17 08:18:06] total 483020
[2026-03-17 08:18:06] -rw-r--r-- 2 boinc boinc 248084481 Mar 17 02:12 ATLAS.root_0
[2026-03-17 08:18:06] -rw-r--r-- 2 boinc boinc    597554 Mar 17 02:12 input.tar.gz
[2026-03-17 08:18:06] -rw-r--r-- 2 boinc boinc     15845 Mar 17 02:12 start_atlas.sh
[2026-03-17 08:18:06] -rw------- 1 boinc boinc 242350433 Mar 17 08:16 HITS.pool.root.1
[2026-03-17 08:18:06] -rw------- 1 boinc boinc   3553280 Mar 17 08:18 result.tar.gz
08:18:07 (917868): run_atlas exited; CPU time 43112.843620
08:18:07 (917868): called boinc_finish(0)

</stderr_txt>
]]>

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