Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:26:18 (187275): wrapper (7.7.26015): starting
19:26:18 (187275): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 19:26:18] Arguments: --nthreads 4
[2026-03-16 19:26:18] Threads: 4
[2026-03-16 19:26:18] Checking for CVMFS
[2026-03-16 19:26:18] No cvmfs_config command found, will try listing directly
[2026-03-16 19:26:18] CVMFS is ok
[2026-03-16 19:26:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 19:26:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 19:26:18] Further information can be found at the LHC@home message board.
[2026-03-16 19:26:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 19:26:18] Checking for apptainer binary...
[2026-03-16 19:26:18] which: no apptainer in ((null))
[2026-03-16 19:26:18] apptainer is not installed, using version from CVMFS
[2026-03-16 19:26:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 19:26:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-16 19:26:18] apptainer works
[2026-03-16 19:26:18] Set ATHENA_PROC_NUMBER=4
[2026-03-16 19:26:18] Set ATHENA_CORE_NUMBER=4
[2026-03-16 19:26:18] Starting ATLAS job with PandaID=7056932741
[2026-03-16 19:26:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 23:22:38]  *** The last 200 lines of the pilot log: ***
[2026-03-16 23:22:38] 2026-03-16 22:17:44,109 | INFO     | mean y: 2330040.310810811
[2026-03-16 23:22:38] 2026-03-16 22:17:44,109 | INFO     | intersect: -17122252860.366207
[2026-03-16 23:22:38] 2026-03-16 22:17:44,109 | INFO     | chi2: 1.1040970519073483
[2026-03-16 23:22:38] 2026-03-16 22:17:44,109 | INFO     | current chi2=1.1040970519073483 (change=-0.026196414643175604 %)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,110 | INFO     | right removable region: 221
[2026-03-16 23:22:38] 2026-03-16 22:17:44,110 | INFO     | sum of square deviations: 3392567795.5
[2026-03-16 23:22:38] 2026-03-16 22:17:44,110 | INFO     | sum of deviations: 9934730260.500002
[2026-03-16 23:22:38] 2026-03-16 22:17:44,110 | INFO     | mean x: 1773692693.5
[2026-03-16 23:22:38] 2026-03-16 22:17:44,111 | INFO     | mean y: 2346084.1666666665
[2026-03-16 23:22:38] 2026-03-16 22:17:44,111 | INFO     | intersect: -5191701474.238921
[2026-03-16 23:22:38] 2026-03-16 22:17:44,111 | INFO     | chi2: 0.0022910447797757547
[2026-03-16 23:22:38] 2026-03-16 22:17:44,111 | INFO     | current chi2=0.0022910447797757547 (change=99.79244171086165 %)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,111 | INFO     | sum of square deviations: 3168461268.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,112 | INFO     | sum of deviations: 8148218228.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,112 | INFO     | mean x: 1773692846.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,112 | INFO     | mean y: 2347298.543778802
[2026-03-16 23:22:38] 2026-03-16 22:17:44,112 | INFO     | intersect: -4558994992.306784
[2026-03-16 23:22:38] 2026-03-16 22:17:44,112 | INFO     | chi2: 0.0011392786120705766
[2026-03-16 23:22:38] 2026-03-16 22:17:44,112 | INFO     | current chi2=0.0011392786120705766 (change=50.27252971536906 %)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,112 | INFO     | sum of square deviations: 2954447953.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,113 | INFO     | sum of deviations: 6801916569.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,113 | INFO     | mean x: 1773692998.5
[2026-03-16 23:22:38] 2026-03-16 22:17:44,113 | INFO     | mean y: 2348257.6886792453
[2026-03-16 23:22:38] 2026-03-16 22:17:44,113 | INFO     | intersect: -4081159723.0716243
[2026-03-16 23:22:38] 2026-03-16 22:17:44,113 | INFO     | chi2: 0.0005539307531343394
[2026-03-16 23:22:38] 2026-03-16 22:17:44,113 | INFO     | current chi2=0.0005539307531343394 (change=51.378815746606485 %)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,113 | INFO     | sum of square deviations: 2750295288.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,114 | INFO     | sum of deviations: 5924960012.000001
[2026-03-16 23:22:38] 2026-03-16 22:17:44,114 | INFO     | mean x: 1773693151.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,114 | INFO     | mean y: 2348912.855072464
[2026-03-16 23:22:38] 2026-03-16 22:17:44,114 | INFO     | intersect: -3818717515.5702953
[2026-03-16 23:22:38] 2026-03-16 22:17:44,114 | INFO     | chi2: 0.0003936975772628015
[2026-03-16 23:22:38] 2026-03-16 22:17:44,114 | INFO     | current chi2=0.0003936975772628015 (change=28.926571591283018 %)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,114 | INFO     | sum of square deviations: 2555770710.5
[2026-03-16 23:22:38] 2026-03-16 22:17:44,115 | INFO     | sum of deviations: 5197923002.5
[2026-03-16 23:22:38] 2026-03-16 22:17:44,115 | INFO     | mean x: 1773693303.5
[2026-03-16 23:22:38] 2026-03-16 22:17:44,115 | INFO     | mean y: 2349482.589108911
[2026-03-16 23:22:38] 2026-03-16 22:17:44,115 | INFO     | intersect: -3604985550.9355516
[2026-03-16 23:22:38] 2026-03-16 22:17:44,115 | INFO     | chi2: 0.00029652885467183987
[2026-03-16 23:22:38] 2026-03-16 22:17:44,115 | INFO     | current chi2=0.00029652885467183987 (change=24.6810567813323 %)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,115 | INFO     | left removable region: 50
[2026-03-16 23:22:38] 2026-03-16 22:17:44,116 | INFO     | sum of square deviations: 1550429070.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,116 | INFO     | sum of deviations: 3512864828.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,116 | INFO     | mean x: 1773693883.0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,116 | INFO     | mean y: 2350335.9941520467
[2026-03-16 23:22:38] 2026-03-16 22:17:44,116 | INFO     | intersect: -4016373885.443109
[2026-03-16 23:22:38] 2026-03-16 22:17:44,116 | INFO     | chi2: 0.000233116187877763
[2026-03-16 23:22:38] 2026-03-16 22:17:44,116 | INFO     | current memory leak: 2.27 B/s (using 171 data points, chi2=0.00)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | could have reported an average CPU frequency of 3552 MHz (11 samples)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | ..............................
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . Timing measurements:
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . get job = 0 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . initial setup = 13 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . payload setup = 13 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . stage-in = 0 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . payload execution = 13821 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . stage-out = 0 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | . log creation = 0 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,117 | INFO     | ..............................
[2026-03-16 23:22:38] 2026-03-16 22:17:44,363 | INFO     | 
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | job summary report
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | --------------------------------------------------
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | PanDA job id: 7056932741
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | task id: 49178139
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | errors: (none)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | pilot state: finished 
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | transexitcode: 0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | exeerrorcode: 0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | exeerrordiag: 
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | exitcode: 0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | exitmsg: OK
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | cpuconsumptiontime: 53426 s
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | nevents: 400
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | neventsw: 0
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | pid: 208135
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | pgrp: 208135
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | corecount: 4
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | event service: False
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | sizes: {0: 2280342, 11: 2280342, 13838: 2310727, 13839: 2319747, 13840: 2319803, 13841: 2319997}
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | --------------------------------------------------
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | 
[2026-03-16 23:22:38] 2026-03-16 22:17:44,364 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/1
[2026-03-16 23:22:38] 2026-03-16 22:17:44,383 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | job 7056932741 has completed (purged errors)
[2026-03-16 23:22:38] 2026-03-16 22:17:44,384 | INFO     | overall cleanup function is called
[2026-03-16 23:22:38] 2026-03-16 22:17:45,392 | INFO     | --- collectZombieJob: --- 10, [208135]
[2026-03-16 23:22:38] 2026-03-16 22:17:45,392 | INFO     | zombie collector waiting for pid 208135
[2026-03-16 23:22:38] 2026-03-16 22:17:45,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 23:22:38] 2026-03-16 22:17:45,392 | INFO     | collected zombie processes
[2026-03-16 23:22:38] 2026-03-16 22:17:45,392 | INFO     | will attempt to kill all subprocesses of pid=208135
[2026-03-16 23:22:38] 2026-03-16 22:17:46,079 | INFO     | process IDs to be killed: [208135] (in reverse order)
[2026-03-16 23:22:38] 2026-03-16 22:17:46,346 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 23:22:38] 2026-03-16 22:17:46,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 23:22:38] 2026-03-16 22:17:46,410 | INFO     | did not find any defunct processes belonging to 208135
[2026-03-16 23:22:38] 2026-03-16 22:17:46,473 | INFO     | did not find any defunct processes belonging to 208135
[2026-03-16 23:22:38] 2026-03-16 22:17:46,474 | INFO     | ready for new job
[2026-03-16 23:22:38] 2026-03-16 22:17:46,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 23:22:38] 2026-03-16 22:17:46,476 | INFO     | **************************************
[2026-03-16 23:22:38] 2026-03-16 22:17:46,476 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 23:22:38] 2026-03-16 22:17:46,476 | INFO     | **************************************
[2026-03-16 23:22:38] 2026-03-16 22:17:46,476 | INFO     | 
[2026-03-16 23:22:38] 2026-03-16 22:17:46,485 | INFO     | architecture information:
[2026-03-16 23:22:38] 2026-03-16 22:17:46,485 | INFO     | executing command: cat /etc/os-release
[2026-03-16 23:22:38] 2026-03-16 22:17:46,502 | INFO     | cat /etc/os-release:
[2026-03-16 23:22:38] NAME="CentOS Linux"
[2026-03-16 23:22:38] VERSION="7 (Core)"
[2026-03-16 23:22:38] ID="centos"
[2026-03-16 23:22:38] ID_LIKE="rhel fedora"
[2026-03-16 23:22:38] VERSION_ID="7"
[2026-03-16 23:22:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 23:22:38] ANSI_COLOR="0;31"
[2026-03-16 23:22:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 23:22:38] HOME_URL="https://www.centos.org/"
[2026-03-16 23:22:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 23:22:38] 
[2026-03-16 23:22:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 23:22:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 23:22:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 23:22:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 23:22:38] 
[2026-03-16 23:22:38] 2026-03-16 22:17:46,502 | INFO     | **************************************
[2026-03-16 23:22:38] 2026-03-16 22:17:46,510 | WARNING  | process 208135 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 23:22:38] 2026-03-16 22:17:46,846 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 23:22:38] 2026-03-16 22:17:47,006 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/1
[2026-03-16 23:22:38] 2026-03-16 22:17:47,028 | INFO     | sufficient remaining disk space (24326963200 B)
[2026-03-16 23:22:38] 2026-03-16 22:17:47,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 23:22:38] 2026-03-16 22:17:47,028 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 23:22:38] 2026-03-16 22:17:47,028 | INFO     | update_server=False
[2026-03-16 23:22:38] 2026-03-16 22:17:47,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 23:22:38] 2026-03-16 22:17:47,042 | INFO     | job.realtimelogging is not enabled
[2026-03-16 23:22:38] 2026-03-16 22:17:47,193 | INFO     | all job control threads have been joined
[2026-03-16 23:22:38] 2026-03-16 22:17:47,244 | INFO     | all payload control threads have been joined
[2026-03-16 23:22:38] 2026-03-16 22:17:47,313 | INFO     | number of running child processes to parent process 208135: 1
[2026-03-16 23:22:38] 2026-03-16 22:17:47,313 | INFO     | maximum number of monitored processes: 6
[2026-03-16 23:22:38] 2026-03-16 22:17:47,313 | INFO     | aborting job monitoring since job object (job id=7056932741) has expired
[2026-03-16 23:22:38] 2026-03-16 22:17:47,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 23:22:38] 2026-03-16 22:17:47,313 | INFO     | will abort loop
[2026-03-16 23:22:38] 2026-03-16 22:17:47,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 23:22:38] 2026-03-16 22:17:47,658 | INFO     | all data control threads have been joined
[2026-03-16 23:22:38] 2026-03-16 22:17:48,034 | INFO     | [job] retrieve thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,047 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,198 | INFO     | [job] control thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,249 | INFO     | [payload] control thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,314 | INFO     | [job] job monitor thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,326 | INFO     | [payload] validate_post thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,663 | INFO     | [data] control thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,827 | INFO     | [job] validate thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:48,828 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:49,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 23:22:38] 2026-03-16 22:17:49,086 | INFO     | [data] copytool_in thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:49,155 | INFO     | [payload] failed_post thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:49,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 23:22:38] 2026-03-16 22:17:49,274 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:49,383 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:49,451 | INFO     | [data] copytool_out thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:50,179 | INFO     | [job] queue monitor thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:17:53,007 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 23:22:38] 2026-03-16 22:18:14,591 | INFO     | [monitor] cgroup control has ended
[2026-03-16 23:22:38] 2026-03-16 22:18:16,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22447526528832)>', '<ExcThread(monitor, started 22447282980608)>']
[2026-03-16 23:22:38] 2026-03-16 22:18:17,146 | INFO     | PID=193864 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 23:22:38] 2026-03-16 22:18:17,147 | INFO     | .. there are 44 such processes running
[2026-03-16 23:22:38] 2026-03-16 22:18:17,147 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 23:22:38] 2026-03-16 22:18:17,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 23:22:38] 2026-03-16 22:18:17,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 23:22:38] 2026-03-16 22:18:17,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 23:22:38] 2026-03-16 22:18:17,147 | INFO     | [monitor] control thread has ended
[2026-03-16 23:22:38] 2026-03-16 22:18:21,314 | INFO     | all workflow threads have been joined
[2026-03-16 23:22:38] 2026-03-16 22:18:21,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 23:22:38] 2026-03-16 22:18:21,314 | INFO     | traces error code: 0
[2026-03-16 23:22:38] 2026-03-16 22:18:21,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 23:22:38] 2026-03-16 22:18:21,505 [wrapper] ==== pilot stdout END ====
[2026-03-16 23:22:38] 2026-03-16 22:18:21,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 23:22:38] 2026-03-16 22:18:21,509 [wrapper] pilotpid: 193864
[2026-03-16 23:22:38] 2026-03-16 22:18:21,512 [wrapper] Pilot exit status: 0
[2026-03-16 23:22:38] 2026-03-16 22:18:21,520 [wrapper] pandaids: 7056932741
[2026-03-16 23:22:38] 2026-03-16 22:18:21,656 [wrapper] cleanup supervisor_pilot 1254543 193865
[2026-03-16 23:22:38] 2026-03-16 22:18:21,658 [wrapper] Test setup, not cleaning
[2026-03-16 23:22:38] 2026-03-16 22:18:21,662 [wrapper] apfmon messages muted
[2026-03-16 23:22:38] 2026-03-16 22:18:21,665 [wrapper] ==== wrapper stdout END ====
[2026-03-16 23:22:38] 2026-03-16 22:18:21,667 [wrapper] ==== wrapper stderr END ====
[2026-03-16 23:22:38]  *** Error codes and diagnostics ***
[2026-03-16 23:22:38]     "exeErrorCode": 0,
[2026-03-16 23:22:38]     "exeErrorDiag": "",
[2026-03-16 23:22:38]     "pilotErrorCode": 0,
[2026-03-16 23:22:38]     "pilotErrorDiag": "",
[2026-03-16 23:22:38]  *** Listing of results directory ***
[2026-03-16 23:22:38] total 471304
[2026-03-16 23:22:38] -rwx------. 1 boinc boinc     36322 Mar 16 15:08 runpilot2-wrapper.sh
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc    585013 Mar 16 15:08 pilot3.tar.gz
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc      5111 Mar 16 15:10 queuedata.json
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc       100 Mar 16 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 23:22:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 19:26 run_atlas
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc       105 Mar 16 19:26 job.xml
[2026-03-16 23:22:38] -rw-r--r--. 2 boinc boinc 239429434 Mar 16 19:26 EVNT.49128136._000005.pool.root.1
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc      6707 Mar 16 19:26 init_data.xml
[2026-03-16 23:22:38] -rw-r--r--. 2 boinc boinc     15845 Mar 16 19:26 start_atlas.sh
[2026-03-16 23:22:38] drwxrwx--x. 2 boinc boinc      4096 Mar 16 19:26 shared
[2026-03-16 23:22:38] -rw-r--r--. 2 boinc boinc    597546 Mar 16 19:26 input.tar.gz
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc         0 Mar 16 19:26 boinc_lockfile
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc      2636 Mar 16 19:26 pandaJob.out
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc   1006429 Mar 16 19:26 agis_schedconf.cvmfs.json
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc       442 Mar 16 19:26 workernode_map.json
[2026-03-16 23:22:38] drwx------. 5 boinc boinc      4096 Mar 16 19:26 pilot3
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc 234549827 Mar 16 23:17 HITS.49178139._000120.pool.root.1
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc       531 Mar 16 23:17 boinc_task_state.xml
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc        95 Mar 16 23:17 pilot_heartbeat.json
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc      1034 Mar 16 23:17 memory_monitor_summary.json
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc   1511579 Mar 16 23:17 agis_ddmendpoints.agis.ALL.json
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc    405631 Mar 16 23:17 log.49178139._000120.job.log.tgz.1
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc      6353 Mar 16 23:17 heartbeat.json
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc      5430 Mar 16 23:18 pilotlog.txt
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc   1938950 Mar 16 23:18 log.49178139._000120.job.log.1
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc       357 Mar 16 23:18 output.list
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc       620 Mar 16 23:18 runtime_log
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc   2365440 Mar 16 23:18 result.tar.gz
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc      9205 Mar 16 23:18 runtime_log.err
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc       663 Mar 16 23:18 Z3YNDm7mNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTLuLDmF754No.diag
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc        28 Mar 16 23:22 wrapper_checkpoint.txt
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc      8192 Mar 16 23:22 boinc_mmap_file
[2026-03-16 23:22:38] -rw-r--r--. 1 boinc boinc     20870 Mar 16 23:22 stderr.txt
[2026-03-16 23:22:38] HITS file was successfully produced:
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc 234549827 Mar 16 23:17 shared/HITS.pool.root.1
[2026-03-16 23:22:38]  *** Contents of shared directory: ***
[2026-03-16 23:22:38] total 465796
[2026-03-16 23:22:38] -rw-r--r--. 2 boinc boinc 239429434 Mar 16 19:26 ATLAS.root_0
[2026-03-16 23:22:38] -rw-r--r--. 2 boinc boinc     15845 Mar 16 19:26 start_atlas.sh
[2026-03-16 23:22:38] -rw-r--r--. 2 boinc boinc    597546 Mar 16 19:26 input.tar.gz
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc 234549827 Mar 16 23:17 HITS.pool.root.1
[2026-03-16 23:22:38] -rw-------. 1 boinc boinc   2365440 Mar 16 23:18 result.tar.gz
23:22:39 (187275): run_atlas exited; CPU time 54097.399343
23:22:39 (187275): called boinc_finish(0)

</stderr_txt>
]]>

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