Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:24:06 (218060): wrapper (7.7.26015): starting
22:24:06 (218060): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 22:24:06] Arguments: --nthreads 4
[2026-03-18 22:24:06] Threads: 4
[2026-03-18 22:24:06] Checking for CVMFS
[2026-03-18 22:24:06] No cvmfs_config command found, will try listing directly
[2026-03-18 22:24:06] CVMFS is ok
[2026-03-18 22:24:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 22:24:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 22:24:06] Further information can be found at the LHC@home message board.
[2026-03-18 22:24:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 22:24:06] Checking for apptainer binary...
[2026-03-18 22:24:06] which: no apptainer in ((null))
[2026-03-18 22:24:06] apptainer is not installed, using version from CVMFS
[2026-03-18 22:24:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 22:24:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-18 22:24:06] apptainer works
[2026-03-18 22:24:06] Set ATHENA_PROC_NUMBER=4
[2026-03-18 22:24:06] Set ATHENA_CORE_NUMBER=4
[2026-03-18 22:24:06] Starting ATLAS job with PandaID=7056933849
[2026-03-18 22:24:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 02:40:51]  *** The last 200 lines of the pilot log: ***
[2026-03-19 02:40:51] 2026-03-19 01:39:50,884 | INFO     | time since job start (15331s) is within the limit (345600.0s)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,358 | INFO     | job 7056933849 has state=finished
[2026-03-19 02:40:51] 2026-03-19 01:39:51,358 | INFO     | preparing for final server update for job 7056933849 in state='finished'
[2026-03-19 02:40:51] 2026-03-19 01:39:51,358 | INFO     | reading metadata from: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7056933849/jobReport.json
[2026-03-19 02:40:51] 2026-03-19 01:39:51,359 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot116/slots/0/workernode_map.json
[2026-03-19 02:40:51] 2026-03-19 01:39:51,360 | INFO     | this job has now completed (state=finished)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,360 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,360 | INFO     | log transfer has been attempted: DONE
[2026-03-19 02:40:51] 2026-03-19 01:39:51,360 | INFO     | job 7056933849 has finished - writing final server update
[2026-03-19 02:40:51] 2026-03-19 01:39:51,360 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2517842/.job.ad'
[2026-03-19 02:40:51] 2026-03-19 01:39:51,360 | INFO     | total number of processed events: 400 (read)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,382 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7056933849/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,383 | INFO     | extracted standard info from prmon json
[2026-03-19 02:40:51] 2026-03-19 01:39:51,383 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 02:40:51] 2026-03-19 01:39:51,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 02:40:51] 2026-03-19 01:39:51,383 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 02:40:51] 2026-03-19 01:39:51,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 02:40:51] 2026-03-19 01:39:51,386 | INFO     | fitting pss+swap vs Time
[2026-03-19 02:40:51] 2026-03-19 01:39:51,386 | INFO     | sum of square deviations: 4903347750.0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,387 | INFO     | sum of deviations: 18647227920.999996
[2026-03-19 02:40:51] 2026-03-19 01:39:51,387 | INFO     | mean x: 1773876708.0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,387 | INFO     | mean y: 2337575.107569721
[2026-03-19 02:40:51] 2026-03-19 01:39:51,387 | INFO     | intersect: -6743641899.391084
[2026-03-19 02:40:51] 2026-03-19 01:39:51,387 | INFO     | chi2: 1.0755216577089504
[2026-03-19 02:40:51] 2026-03-19 01:39:51,387 | INFO     | sum of square deviations: 4616114457.5
[2026-03-19 02:40:51] 2026-03-19 01:39:51,388 | INFO     | sum of deviations: 18129192131.000015
[2026-03-19 02:40:51] 2026-03-19 01:39:51,388 | INFO     | mean x: 1773876555.5
[2026-03-19 02:40:51] 2026-03-19 01:39:51,388 | INFO     | mean y: 2337300.0325203254
[2026-03-19 02:40:51] 2026-03-19 01:39:51,388 | INFO     | intersect: -6964333303.008091
[2026-03-19 02:40:51] 2026-03-19 01:39:51,388 | INFO     | chi2: 1.0758665826727292
[2026-03-19 02:40:51] 2026-03-19 01:39:51,388 | INFO     | current chi2=1.0758665826727292 (change=-0.03207048052510201 %)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,388 | INFO     | right removable region: 245
[2026-03-19 02:40:51] 2026-03-19 01:39:51,389 | INFO     | sum of square deviations: 4616114457.5
[2026-03-19 02:40:51] 2026-03-19 01:39:51,390 | INFO     | sum of deviations: -4127245421.0000014
[2026-03-19 02:40:51] 2026-03-19 01:39:51,390 | INFO     | mean x: 1773876860.5
[2026-03-19 02:40:51] 2026-03-19 01:39:51,390 | INFO     | mean y: 2349499.2032520324
[2026-03-19 02:40:51] 2026-03-19 01:39:51,390 | INFO     | intersect: 1588364147.9564636
[2026-03-19 02:40:51] 2026-03-19 01:39:51,390 | INFO     | chi2: 0.006250904020605628
[2026-03-19 02:40:51] 2026-03-19 01:39:51,390 | INFO     | current chi2=0.006250904020605628 (change=99.41880258981291 %)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,390 | INFO     | sum of square deviations: 4340323240.0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | sum of deviations: -3252146070.0000014
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | mean x: 1773877013.0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | mean y: 2349015.917012448
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | intersect: 1331491302.6770399
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | chi2: 0.005955080604401612
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | current chi2=0.005955080604401612 (change=4.732490136288399 %)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | left removable region: 20
[2026-03-19 02:40:51] 2026-03-19 01:39:51,391 | INFO     | sum of square deviations: 3531973200.0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,392 | INFO     | sum of deviations: -2204756123.0000024
[2026-03-19 02:40:51] 2026-03-19 01:39:51,392 | INFO     | mean x: 1773877135.0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,392 | INFO     | mean y: 2348243.0222222223
[2026-03-19 02:40:51] 2026-03-19 01:39:51,392 | INFO     | intersect: 1109651796.4129875
[2026-03-19 02:40:51] 2026-03-19 01:39:51,392 | INFO     | chi2: 0.005332793426846794
[2026-03-19 02:40:51] 2026-03-19 01:39:51,392 | INFO     | current memory leak: -0.62 B/s (using 225 data points, chi2=0.01)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | could have reported an average CPU frequency of 3583 MHz (12 samples)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | ..............................
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . Timing measurements:
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . get job = 0 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . initial setup = 5 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . payload setup = 7 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . stage-in = 0 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . payload execution = 15305 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . stage-out = 0 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | . log creation = 0 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,393 | INFO     | ..............................
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | 
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | job summary report
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | --------------------------------------------------
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | PanDA job id: 7056933849
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | task id: 49178217
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | errors: (none)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | pilot state: finished 
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | transexitcode: 0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | exeerrorcode: 0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | exeerrordiag: 
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | exitcode: 0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | exitmsg: OK
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | cpuconsumptiontime: 59878 s
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | nevents: 400
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | neventsw: 0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | pid: 228842
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | pgrp: 228842
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | corecount: 4
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | event service: False
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | sizes: {0: 2280312, 10: 2280312, 15316: 2311385, 15317: 2320407, 15319: 2320463, 15320: 2320657}
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | --------------------------------------------------
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | 
[2026-03-19 02:40:51] 2026-03-19 01:39:51,474 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-03-19 02:40:51] 2026-03-19 01:39:51,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | job 7056933849 has completed (purged errors)
[2026-03-19 02:40:51] 2026-03-19 01:39:51,499 | INFO     | overall cleanup function is called
[2026-03-19 02:40:51] 2026-03-19 01:39:52,506 | INFO     | --- collectZombieJob: --- 10, [228842]
[2026-03-19 02:40:51] 2026-03-19 01:39:52,507 | INFO     | zombie collector waiting for pid 228842
[2026-03-19 02:40:51] 2026-03-19 01:39:52,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 02:40:51] 2026-03-19 01:39:52,507 | INFO     | collected zombie processes
[2026-03-19 02:40:51] 2026-03-19 01:39:52,507 | INFO     | will attempt to kill all subprocesses of pid=228842
[2026-03-19 02:40:51] 2026-03-19 01:39:52,988 | INFO     | process IDs to be killed: [228842] (in reverse order)
[2026-03-19 02:40:51] 2026-03-19 01:39:53,219 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 02:40:51] 2026-03-19 01:39:53,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 02:40:51] 2026-03-19 01:39:53,249 | INFO     | did not find any defunct processes belonging to 228842
[2026-03-19 02:40:51] 2026-03-19 01:39:53,277 | INFO     | did not find any defunct processes belonging to 228842
[2026-03-19 02:40:51] 2026-03-19 01:39:53,277 | INFO     | ready for new job
[2026-03-19 02:40:51] 2026-03-19 01:39:53,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 02:40:51] 2026-03-19 01:39:53,279 | INFO     | **************************************
[2026-03-19 02:40:51] 2026-03-19 01:39:53,279 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 02:40:51] 2026-03-19 01:39:53,279 | INFO     | **************************************
[2026-03-19 02:40:51] 2026-03-19 01:39:53,279 | INFO     | 
[2026-03-19 02:40:51] 2026-03-19 01:39:53,285 | INFO     | architecture information:
[2026-03-19 02:40:51] 2026-03-19 01:39:53,285 | INFO     | executing command: cat /etc/os-release
[2026-03-19 02:40:51] 2026-03-19 01:39:53,299 | INFO     | cat /etc/os-release:
[2026-03-19 02:40:51] NAME="CentOS Linux"
[2026-03-19 02:40:51] VERSION="7 (Core)"
[2026-03-19 02:40:51] ID="centos"
[2026-03-19 02:40:51] ID_LIKE="rhel fedora"
[2026-03-19 02:40:51] VERSION_ID="7"
[2026-03-19 02:40:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 02:40:51] ANSI_COLOR="0;31"
[2026-03-19 02:40:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 02:40:51] HOME_URL="https://www.centos.org/"
[2026-03-19 02:40:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 02:40:51] 
[2026-03-19 02:40:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 02:40:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 02:40:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 02:40:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 02:40:51] 
[2026-03-19 02:40:51] 2026-03-19 01:39:53,299 | INFO     | **************************************
[2026-03-19 02:40:51] 2026-03-19 01:39:53,802 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-03-19 02:40:51] 2026-03-19 01:39:53,819 | INFO     | sufficient remaining disk space (28989980672 B)
[2026-03-19 02:40:51] 2026-03-19 01:39:53,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 02:40:51] 2026-03-19 01:39:53,819 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 02:40:51] 2026-03-19 01:39:53,819 | INFO     | update_server=False
[2026-03-19 02:40:51] 2026-03-19 01:39:53,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 02:40:51] 2026-03-19 01:39:53,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 02:40:51] 2026-03-19 01:39:53,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:40:51] 2026-03-19 01:39:53,820 | INFO     | aborting loop
[2026-03-19 02:40:51] 2026-03-19 01:39:54,495 | INFO     | all data control threads have been joined
[2026-03-19 02:40:51] 2026-03-19 01:39:54,799 | INFO     | all job control threads have been joined
[2026-03-19 02:40:51] 2026-03-19 01:39:54,825 | INFO     | [job] retrieve thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:54,825 | INFO     | [job] job monitor thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,100 | INFO     | all payload control threads have been joined
[2026-03-19 02:40:51] 2026-03-19 01:39:55,294 | INFO     | [job] validate thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,474 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,501 | INFO     | [data] control thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,541 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,773 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,804 | INFO     | [job] control thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,825 | INFO     | [data] copytool_out thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:55,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 02:40:51] 2026-03-19 01:39:56,073 | INFO     | [data] copytool_in thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:56,106 | INFO     | [payload] control thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:56,310 | INFO     | [payload] failed_post thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:56,315 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:56,327 | INFO     | [payload] validate_post thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:56,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:40:51] 2026-03-19 01:39:57,457 | INFO     | [job] queue monitor thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:39:59,988 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 02:40:51] 2026-03-19 01:40:24,503 | INFO     | PID=222960 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-19 02:40:51] 2026-03-19 01:40:24,503 | INFO     | .. there are 47 such processes running
[2026-03-19 02:40:51] 2026-03-19 01:40:24,503 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 02:40:51] 2026-03-19 01:40:24,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 02:40:51] 2026-03-19 01:40:24,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 02:40:51] 2026-03-19 01:40:44,729 | INFO     | [monitor] cgroup control has ended
[2026-03-19 02:40:51] 2026-03-19 01:40:45,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23171150292800)>', '<ExcThread(monitor, started 23170907379456)>']
[2026-03-19 02:40:51] 2026-03-19 01:40:46,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 02:40:51] 2026-03-19 01:40:46,610 | INFO     | [monitor] control thread has ended
[2026-03-19 02:40:51] 2026-03-19 01:40:50,763 | INFO     | all workflow threads have been joined
[2026-03-19 02:40:51] 2026-03-19 01:40:50,763 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 02:40:51] 2026-03-19 01:40:50,763 | INFO     | traces error code: 0
[2026-03-19 02:40:51] 2026-03-19 01:40:50,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 02:40:51] 2026-03-19 01:40:50,979 [wrapper] ==== pilot stdout END ====
[2026-03-19 02:40:51] 2026-03-19 01:40:50,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 02:40:51] 2026-03-19 01:40:50,985 [wrapper] pilotpid: 222960
[2026-03-19 02:40:51] 2026-03-19 01:40:50,987 [wrapper] Pilot exit status: 0
[2026-03-19 02:40:51] 2026-03-19 01:40:50,996 [wrapper] pandaids: 7056933849
[2026-03-19 02:40:51] 2026-03-19 01:40:51,131 [wrapper] cleanup supervisor_pilot 1360796 222961
[2026-03-19 02:40:51] 2026-03-19 01:40:51,134 [wrapper] Test setup, not cleaning
[2026-03-19 02:40:51] 2026-03-19 01:40:51,136 [wrapper] apfmon messages muted
[2026-03-19 02:40:51] 2026-03-19 01:40:51,139 [wrapper] ==== wrapper stdout END ====
[2026-03-19 02:40:51] 2026-03-19 01:40:51,142 [wrapper] ==== wrapper stderr END ====
[2026-03-19 02:40:51]  *** Error codes and diagnostics ***
[2026-03-19 02:40:51]     "exeErrorCode": 0,
[2026-03-19 02:40:51]     "exeErrorDiag": "",
[2026-03-19 02:40:51]     "pilotErrorCode": 0,
[2026-03-19 02:40:51]     "pilotErrorDiag": "",
[2026-03-19 02:40:51]  *** Listing of results directory ***
[2026-03-19 02:40:51] total 494396
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc    585013 Mar 16 15:08 pilot3.tar.gz
[2026-03-19 02:40:51] -rwx------. 1 boinc boinc     36322 Mar 16 15:08 runpilot2-wrapper.sh
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc      5111 Mar 16 15:10 queuedata.json
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc       100 Mar 18 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 02:40:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 22:24 run_atlas
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc       105 Mar 18 22:24 job.xml
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc      6709 Mar 18 22:24 init_data.xml
[2026-03-19 02:40:51] -rw-r--r--. 2 boinc boinc 244363616 Mar 18 22:24 EVNT.49128307._000002.pool.root.1
[2026-03-19 02:40:51] -rw-r--r--. 2 boinc boinc     15845 Mar 18 22:24 start_atlas.sh
[2026-03-19 02:40:51] drwxrwx--x. 2 boinc boinc      4096 Mar 18 22:24 shared
[2026-03-19 02:40:51] -rw-r--r--. 2 boinc boinc    597539 Mar 18 22:24 input.tar.gz
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc         0 Mar 18 22:24 boinc_lockfile
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc      2613 Mar 18 22:24 pandaJob.out
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc   1010366 Mar 18 22:24 agis_schedconf.cvmfs.json
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc       443 Mar 18 22:24 workernode_map.json
[2026-03-19 02:40:51] drwx------. 5 boinc boinc      4096 Mar 18 22:24 pilot3
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc 252807072 Mar 19 02:39 HITS.49178217._000049.pool.root.1
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc       530 Mar 19 02:39 boinc_task_state.xml
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc      1028 Mar 19 02:39 memory_monitor_summary.json
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc        95 Mar 19 02:39 pilot_heartbeat.json
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc   1511579 Mar 19 02:39 agis_ddmendpoints.agis.ALL.json
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc    433824 Mar 19 02:39 log.49178217._000049.job.log.tgz.1
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc      6348 Mar 19 02:39 heartbeat.json
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc      8192 Mar 19 02:40 boinc_mmap_file
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc        28 Mar 19 02:40 wrapper_checkpoint.txt
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc      4829 Mar 19 02:40 pilotlog.txt
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc   2140727 Mar 19 02:40 log.49178217._000049.job.log.1
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc       357 Mar 19 02:40 output.list
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc       620 Mar 19 02:40 runtime_log
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc   2590720 Mar 19 02:40 result.tar.gz
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc      9222 Mar 19 02:40 runtime_log.err
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc       665 Mar 19 02:40 qNuLDmInNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtMuLDmMeKb3m.diag
[2026-03-19 02:40:51] -rw-r--r--. 1 boinc boinc     20893 Mar 19 02:40 stderr.txt
[2026-03-19 02:40:51] HITS file was successfully produced:
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc 252807072 Mar 19 02:39 shared/HITS.pool.root.1
[2026-03-19 02:40:51]  *** Contents of shared directory: ***
[2026-03-19 02:40:51] total 488664
[2026-03-19 02:40:51] -rw-r--r--. 2 boinc boinc 244363616 Mar 18 22:24 ATLAS.root_0
[2026-03-19 02:40:51] -rw-r--r--. 2 boinc boinc     15845 Mar 18 22:24 start_atlas.sh
[2026-03-19 02:40:51] -rw-r--r--. 2 boinc boinc    597539 Mar 18 22:24 input.tar.gz
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc 252807072 Mar 19 02:39 HITS.pool.root.1
[2026-03-19 02:40:51] -rw-------. 1 boinc boinc   2590720 Mar 19 02:40 result.tar.gz
02:40:52 (218060): run_atlas exited; CPU time 60624.707671
02:40:52 (218060): called boinc_finish(0)

</stderr_txt>
]]>

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