Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:10:47 (1166093): wrapper (7.7.26015): starting
14:10:47 (1166093): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 14:10:47] Arguments: --nthreads 4
[2026-03-18 14:10:47] Threads: 4
[2026-03-18 14:10:47] Checking for CVMFS
[2026-03-18 14:10:47] No cvmfs_config command found, will try listing directly
[2026-03-18 14:10:47] CVMFS is ok
[2026-03-18 14:10:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 14:10:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 14:10:47] Further information can be found at the LHC@home message board.
[2026-03-18 14:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 14:10:47] Checking for apptainer binary...
[2026-03-18 14:10:47] which: no apptainer in ((null))
[2026-03-18 14:10:47] apptainer is not installed, using version from CVMFS
[2026-03-18 14:10:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 14:10:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot152/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-18 14:10:47] apptainer works
[2026-03-18 14:10:47] Set ATHENA_PROC_NUMBER=4
[2026-03-18 14:10:47] Set ATHENA_CORE_NUMBER=4
[2026-03-18 14:10:47] Starting ATLAS job with PandaID=7056942342
[2026-03-18 14:10:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot152/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 18:05:18]  *** The last 200 lines of the pilot log: ***
[2026-03-18 18:05:18] 2026-03-18 17:00:48,881 | INFO     | extracted standard info from prmon json
[2026-03-18 18:05:18] 2026-03-18 17:00:48,882 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 18:05:18] 2026-03-18 17:00:48,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 18:05:18] 2026-03-18 17:00:48,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 18:05:18] 2026-03-18 17:00:48,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 18:05:18] 2026-03-18 17:00:48,884 | INFO     | fitting pss+swap vs Time
[2026-03-18 18:05:18] 2026-03-18 17:00:48,885 | INFO     | sum of square deviations: 3579276412.5
[2026-03-18 18:05:18] 2026-03-18 17:00:48,886 | INFO     | sum of deviations: 24465898971.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,886 | INFO     | mean x: 1773846349.5
[2026-03-18 18:05:18] 2026-03-18 17:00:48,886 | INFO     | mean y: 2329183.7699115044
[2026-03-18 18:05:18] 2026-03-18 17:00:48,886 | INFO     | intersect: -12122676145.626162
[2026-03-18 18:05:18] 2026-03-18 17:00:48,886 | INFO     | chi2: 1.0824184698606496
[2026-03-18 18:05:18] 2026-03-18 17:00:48,886 | INFO     | sum of square deviations: 3346927870.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | sum of deviations: 23877778512.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | mean x: 1773846197.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | mean y: 2328797.705882353
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | intersect: -12652711361.949402
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | chi2: 1.0827876138350159
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | current chi2=1.0827876138350159 (change=-0.034103628554471556 %)
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | right removable region: 220
[2026-03-18 18:05:18] 2026-03-18 17:00:48,887 | INFO     | sum of square deviations: 3346927870.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,888 | INFO     | sum of deviations: 2841851347.0000005
[2026-03-18 18:05:18] 2026-03-18 17:00:48,888 | INFO     | mean x: 1773846502.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,888 | INFO     | mean y: 2343174.0904977378
[2026-03-18 18:05:18] 2026-03-18 17:00:48,888 | INFO     | intersect: -1503816584.016252
[2026-03-18 18:05:18] 2026-03-18 17:00:48,888 | INFO     | chi2: 0.004088115558689773
[2026-03-18 18:05:18] 2026-03-18 17:00:48,888 | INFO     | current chi2=0.004088115558689773 (change=99.62231653722463 %)
[2026-03-18 18:05:18] 2026-03-18 17:00:48,889 | INFO     | sum of square deviations: 3124858590.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,889 | INFO     | sum of deviations: 3731470924.5
[2026-03-18 18:05:18] 2026-03-18 17:00:48,890 | INFO     | mean x: 1773846654.5
[2026-03-18 18:05:18] 2026-03-18 17:00:48,890 | INFO     | mean y: 2342561.4583333335
[2026-03-18 18:05:18] 2026-03-18 17:00:48,890 | INFO     | intersect: -2115851598.4215052
[2026-03-18 18:05:18] 2026-03-18 17:00:48,890 | INFO     | chi2: 0.0030236404480602085
[2026-03-18 18:05:18] 2026-03-18 17:00:48,890 | INFO     | current chi2=0.0030236404480602085 (change=26.038283295757058 %)
[2026-03-18 18:05:18] 2026-03-18 17:00:48,890 | INFO     | sum of square deviations: 2912836010.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | sum of deviations: 4257207141.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | mean x: 1773846807.0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | mean y: 2342185.3412322276
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | intersect: -2590194183.98237
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | chi2: 0.002347199777141476
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | current chi2=0.002347199777141476 (change=22.371729791903576 %)
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | left removable region: 30
[2026-03-18 18:05:18] 2026-03-18 17:00:48,891 | INFO     | sum of square deviations: 2126802667.5
[2026-03-18 18:05:18] 2026-03-18 17:00:48,892 | INFO     | sum of deviations: 2425351398.9999995
[2026-03-18 18:05:18] 2026-03-18 17:00:48,892 | INFO     | mean x: 1773847081.5
[2026-03-18 18:05:18] 2026-03-18 17:00:48,892 | INFO     | mean y: 2343515.2736842106
[2026-03-18 18:05:18] 2026-03-18 17:00:48,892 | INFO     | intersect: -2020506355.318784
[2026-03-18 18:05:18] 2026-03-18 17:00:48,892 | INFO     | chi2: 0.0006866748331785179
[2026-03-18 18:05:18] 2026-03-18 17:00:48,892 | INFO     | current memory leak: 1.14 B/s (using 190 data points, chi2=0.00)
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | could have reported an average CPU frequency of 3580 MHz (11 samples)
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | ..............................
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . Timing measurements:
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . get job = 0 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . initial setup = 5 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . payload setup = 9 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . stage-in = 0 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . payload execution = 13760 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . stage-out = 0 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | . log creation = 0 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,893 | INFO     | ..............................
[2026-03-18 18:05:18] 2026-03-18 17:00:48,967 | INFO     | 
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | job summary report
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | --------------------------------------------------
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | PanDA job id: 7056942342
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | task id: 49178731
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | errors: (none)
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | pilot state: finished 
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | transexitcode: 0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | exeerrorcode: 0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | exeerrordiag: 
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | exitcode: 0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | exitmsg: OK
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | cpuconsumptiontime: 52418 s
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | nevents: 400
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | neventsw: 0
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | pid: 1212662
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | pgrp: 1212662
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | corecount: 4
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | event service: False
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | sizes: {0: 2280306, 11: 2280306, 13773: 2310737, 13775: 2319815, 13776: 2319953}
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | --------------------------------------------------
[2026-03-18 18:05:18] 2026-03-18 17:00:48,968 | INFO     | 
[2026-03-18 18:05:18] 2026-03-18 17:00:48,969 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot152/slots/0
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 18:05:18] 2026-03-18 17:00:49,042 | INFO     | job 7056942342 has completed (purged errors)
[2026-03-18 18:05:18] 2026-03-18 17:00:49,043 | INFO     | overall cleanup function is called
[2026-03-18 18:05:18] 2026-03-18 17:00:50,049 | INFO     | --- collectZombieJob: --- 10, [1212662]
[2026-03-18 18:05:18] 2026-03-18 17:00:50,050 | INFO     | zombie collector waiting for pid 1212662
[2026-03-18 18:05:18] 2026-03-18 17:00:50,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 18:05:18] 2026-03-18 17:00:50,050 | INFO     | collected zombie processes
[2026-03-18 18:05:18] 2026-03-18 17:00:50,050 | INFO     | will attempt to kill all subprocesses of pid=1212662
[2026-03-18 18:05:18] 2026-03-18 17:00:50,683 | INFO     | process IDs to be killed: [1212662] (in reverse order)
[2026-03-18 18:05:18] 2026-03-18 17:00:51,050 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 18:05:18] 2026-03-18 17:00:51,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 18:05:18] 2026-03-18 17:00:51,125 | INFO     | did not find any defunct processes belonging to 1212662
[2026-03-18 18:05:18] 2026-03-18 17:00:51,176 | INFO     | did not find any defunct processes belonging to 1212662
[2026-03-18 18:05:18] 2026-03-18 17:00:51,177 | INFO     | ready for new job
[2026-03-18 18:05:18] 2026-03-18 17:00:51,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 18:05:18] 2026-03-18 17:00:51,181 | INFO     | **************************************
[2026-03-18 18:05:18] 2026-03-18 17:00:51,188 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 18:05:18] 2026-03-18 17:00:51,188 | INFO     | **************************************
[2026-03-18 18:05:18] 2026-03-18 17:00:51,188 | INFO     | 
[2026-03-18 18:05:18] 2026-03-18 17:00:51,198 | INFO     | architecture information:
[2026-03-18 18:05:18] 2026-03-18 17:00:51,199 | INFO     | executing command: cat /etc/os-release
[2026-03-18 18:05:18] 2026-03-18 17:00:51,221 | INFO     | cat /etc/os-release:
[2026-03-18 18:05:18] NAME="CentOS Linux"
[2026-03-18 18:05:18] VERSION="7 (Core)"
[2026-03-18 18:05:18] ID="centos"
[2026-03-18 18:05:18] ID_LIKE="rhel fedora"
[2026-03-18 18:05:18] VERSION_ID="7"
[2026-03-18 18:05:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 18:05:18] ANSI_COLOR="0;31"
[2026-03-18 18:05:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 18:05:18] HOME_URL="https://www.centos.org/"
[2026-03-18 18:05:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 18:05:18] 
[2026-03-18 18:05:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 18:05:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 18:05:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 18:05:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 18:05:18] 
[2026-03-18 18:05:18] 2026-03-18 17:00:51,221 | INFO     | **************************************
[2026-03-18 18:05:18] 2026-03-18 17:00:51,275 | WARNING  | process 1212662 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 18:05:18] 2026-03-18 17:00:51,619 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 18:05:18] 2026-03-18 17:00:51,724 | INFO     | executing command: df -mP /var/lib/boinc/var/slot152/slots/0
[2026-03-18 18:05:18] 2026-03-18 17:00:51,750 | INFO     | sufficient remaining disk space (32500613120 B)
[2026-03-18 18:05:18] 2026-03-18 17:00:51,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 18:05:18] 2026-03-18 17:00:51,750 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 18:05:18] 2026-03-18 17:00:51,751 | INFO     | update_server=False
[2026-03-18 18:05:18] 2026-03-18 17:00:51,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 18:05:18] 2026-03-18 17:00:51,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 18:05:18] 2026-03-18 17:00:51,948 | INFO     | all data control threads have been joined
[2026-03-18 18:05:18] 2026-03-18 17:00:52,224 | INFO     | number of running child processes to parent process 1212662: 1
[2026-03-18 18:05:18] 2026-03-18 17:00:52,225 | INFO     | maximum number of monitored processes: 6
[2026-03-18 18:05:18] 2026-03-18 17:00:52,225 | INFO     | aborting job monitoring since job object (job id=7056942342) has expired
[2026-03-18 18:05:18] 2026-03-18 17:00:52,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:05:18] 2026-03-18 17:00:52,225 | INFO     | will abort loop
[2026-03-18 18:05:18] 2026-03-18 17:00:52,336 | INFO     | all payload control threads have been joined
[2026-03-18 18:05:18] 2026-03-18 17:00:52,491 | INFO     | all job control threads have been joined
[2026-03-18 18:05:18] 2026-03-18 17:00:52,756 | INFO     | [job] retrieve thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:52,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:52,954 | INFO     | [data] control thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,068 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,182 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,186 | INFO     | [data] copytool_in thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,230 | INFO     | [job] job monitor thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,244 | INFO     | [job] validate thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,342 | INFO     | [payload] control thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,356 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,497 | INFO     | [job] control thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,779 | INFO     | [data] copytool_out thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,949 | INFO     | [payload] validate_post thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:53,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:05:18] 2026-03-18 17:00:54,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 18:05:18] 2026-03-18 17:00:54,163 | INFO     | [payload] failed_post thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:54,983 | INFO     | [job] queue monitor thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:00:58,037 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 18:05:18] 2026-03-18 17:01:21,943 | INFO     | PID=1180767 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 18:05:18] 2026-03-18 17:01:21,943 | INFO     | .. there are 45 such processes running
[2026-03-18 18:05:18] 2026-03-18 17:01:21,943 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 18:05:18] 2026-03-18 17:01:21,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 18:05:18] 2026-03-18 17:01:21,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 18:05:18] 2026-03-18 17:01:24,567 | INFO     | [monitor] cgroup control has ended
[2026-03-18 18:05:18] 2026-03-18 17:01:26,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22457857460032)>', '<ExcThread(monitor, started 22457613551360)>']
[2026-03-18 18:05:18] 2026-03-18 17:01:26,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 18:05:18] 2026-03-18 17:01:26,970 | INFO     | [monitor] control thread has ended
[2026-03-18 18:05:18] 2026-03-18 17:01:31,160 | INFO     | all workflow threads have been joined
[2026-03-18 18:05:18] 2026-03-18 17:01:31,161 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 18:05:18] 2026-03-18 17:01:31,161 | INFO     | traces error code: 0
[2026-03-18 18:05:18] 2026-03-18 17:01:31,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 18:05:18] 2026-03-18 17:01:31,358 [wrapper] ==== pilot stdout END ====
[2026-03-18 18:05:18] 2026-03-18 17:01:31,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 18:05:18] 2026-03-18 17:01:31,369 [wrapper] pilotpid: 1180767
[2026-03-18 18:05:18] 2026-03-18 17:01:31,386 [wrapper] Pilot exit status: 0
[2026-03-18 18:05:18] 2026-03-18 17:01:31,448 [wrapper] pandaids: 7056942342
[2026-03-18 18:05:18] 2026-03-18 17:01:31,632 [wrapper] cleanup supervisor_pilot 2376715 1180769
[2026-03-18 18:05:18] 2026-03-18 17:01:31,642 [wrapper] Test setup, not cleaning
[2026-03-18 18:05:18] 2026-03-18 17:01:31,648 [wrapper] apfmon messages muted
[2026-03-18 18:05:18] 2026-03-18 17:01:31,654 [wrapper] ==== wrapper stdout END ====
[2026-03-18 18:05:18] 2026-03-18 17:01:31,657 [wrapper] ==== wrapper stderr END ====
[2026-03-18 18:05:18]  *** Error codes and diagnostics ***
[2026-03-18 18:05:18]     "exeErrorCode": 0,
[2026-03-18 18:05:18]     "exeErrorDiag": "",
[2026-03-18 18:05:18]     "pilotErrorCode": 0,
[2026-03-18 18:05:18]     "pilotErrorDiag": "",
[2026-03-18 18:05:18]  *** Listing of results directory ***
[2026-03-18 18:05:18] total 473340
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc    585013 Mar 16 15:05 pilot3.tar.gz
[2026-03-18 18:05:18] -rwx------. 1 boinc boinc     36322 Mar 16 15:05 runpilot2-wrapper.sh
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc      5111 Mar 16 15:05 queuedata.json
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc       100 Mar 18 14:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 18:05:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 14:10 run_atlas
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc       105 Mar 18 14:10 job.xml
[2026-03-18 18:05:18] -rw-r--r--. 2 boinc boinc    597530 Mar 18 14:10 input.tar.gz
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc      6709 Mar 18 14:10 init_data.xml
[2026-03-18 18:05:18] -rw-r--r--. 2 boinc boinc 242415382 Mar 18 14:10 EVNT.49129589._000005.pool.root.1
[2026-03-18 18:05:18] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:10 start_atlas.sh
[2026-03-18 18:05:18] drwxrwx--x. 2 boinc boinc      4096 Mar 18 14:10 shared
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc         0 Mar 18 14:10 boinc_lockfile
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc      2607 Mar 18 14:10 pandaJob.out
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc   1010909 Mar 18 14:10 agis_schedconf.cvmfs.json
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc       445 Mar 18 14:11 workernode_map.json
[2026-03-18 18:05:18] drwx------. 5 boinc boinc      4096 Mar 18 14:11 pilot3
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc 233706818 Mar 18 18:00 HITS.49178731._000115.pool.root.1
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc       529 Mar 18 18:00 boinc_task_state.xml
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc      1033 Mar 18 18:00 memory_monitor_summary.json
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc   1511579 Mar 18 18:00 agis_ddmendpoints.agis.ALL.json
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc    398428 Mar 18 18:00 log.49178731._000115.job.log.tgz.1
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc      6351 Mar 18 18:00 heartbeat.json
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc        95 Mar 18 18:00 pilot_heartbeat.json
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc      5363 Mar 18 18:01 pilotlog.txt
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc   1918666 Mar 18 18:01 log.49178731._000115.job.log.1
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc       357 Mar 18 18:01 output.list
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc       620 Mar 18 18:01 runtime_log
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc   2334720 Mar 18 18:01 result.tar.gz
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc       665 Mar 18 18:01 wQeKDmQkNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOHuLDmm5e2Mm.diag
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc      9222 Mar 18 18:01 runtime_log.err
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc        27 Mar 18 18:04 wrapper_checkpoint.txt
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc      8192 Mar 18 18:05 boinc_mmap_file
[2026-03-18 18:05:18] -rw-r--r--. 1 boinc boinc     20859 Mar 18 18:05 stderr.txt
[2026-03-18 18:05:18] HITS file was successfully produced:
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc 233706818 Mar 18 18:00 shared/HITS.pool.root.1
[2026-03-18 18:05:18]  *** Contents of shared directory: ***
[2026-03-18 18:05:18] total 467856
[2026-03-18 18:05:18] -rw-r--r--. 2 boinc boinc    597530 Mar 18 14:10 input.tar.gz
[2026-03-18 18:05:18] -rw-r--r--. 2 boinc boinc 242415382 Mar 18 14:10 ATLAS.root_0
[2026-03-18 18:05:18] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:10 start_atlas.sh
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc 233706818 Mar 18 18:00 HITS.pool.root.1
[2026-03-18 18:05:18] -rw-------. 1 boinc boinc   2334720 Mar 18 18:01 result.tar.gz
18:05:19 (1166093): run_atlas exited; CPU time 53091.433183
18:05:19 (1166093): called boinc_finish(0)

</stderr_txt>
]]>

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