Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:12:03 (2438487): wrapper (7.7.26015): starting
00:12:03 (2438487): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 00:12:03] Arguments: --nthreads 4
[2026-03-18 00:12:03] Threads: 4
[2026-03-18 00:12:03] Checking for CVMFS
[2026-03-18 00:12:03] No cvmfs_config command found, will try listing directly
[2026-03-18 00:12:03] CVMFS is ok
[2026-03-18 00:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 00:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 00:12:03] Further information can be found at the LHC@home message board.
[2026-03-18 00:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 00:12:03] Checking for apptainer binary...
[2026-03-18 00:12:03] which: no apptainer in ((null))
[2026-03-18 00:12:03] apptainer is not installed, using version from CVMFS
[2026-03-18 00:12:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 00:12:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-18 00:12:03] apptainer works
[2026-03-18 00:12:03] Set ATHENA_PROC_NUMBER=4
[2026-03-18 00:12:03] Set ATHENA_CORE_NUMBER=4
[2026-03-18 00:12:03] Starting ATLAS job with PandaID=7056936784
[2026-03-18 00:12:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 04:47:27]  *** The last 200 lines of the pilot log: ***
[2026-03-18 04:47:27] 2026-03-18 03:46:46,466 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7056936784/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,466 | INFO     | extracted standard info from prmon json
[2026-03-18 04:47:27] 2026-03-18 03:46:46,466 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 04:47:27] 2026-03-18 03:46:46,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 04:47:27] 2026-03-18 03:46:46,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 04:47:27] 2026-03-18 03:46:46,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 04:47:27] 2026-03-18 03:46:46,469 | INFO     | fitting pss+swap vs Time
[2026-03-18 04:47:27] 2026-03-18 03:46:46,470 | INFO     | sum of square deviations: 6035722470.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,471 | INFO     | sum of deviations: 2061278633.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,471 | INFO     | mean x: 1773797395.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,471 | INFO     | mean y: 2355169.6468401486
[2026-03-18 04:47:27] 2026-03-18 03:46:46,471 | INFO     | intersect: -603419977.8616505
[2026-03-18 04:47:27] 2026-03-18 03:46:46,471 | INFO     | chi2: 1.1052173618916672
[2026-03-18 04:47:27] 2026-03-18 03:46:46,471 | INFO     | sum of square deviations: 5705372090.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,472 | INFO     | sum of deviations: 1569205845.9999962
[2026-03-18 04:47:27] 2026-03-18 03:46:46,473 | INFO     | mean x: 1773797242.5
[2026-03-18 04:47:27] 2026-03-18 03:46:46,473 | INFO     | mean y: 2354942.462121212
[2026-03-18 04:47:27] 2026-03-18 03:46:46,473 | INFO     | intersect: -485510346.3642335
[2026-03-18 04:47:27] 2026-03-18 03:46:46,473 | INFO     | chi2: 1.1048023468770491
[2026-03-18 04:47:27] 2026-03-18 03:46:46,473 | INFO     | current chi2=1.1048023468770491 (change=0.03755053339984783 %)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,473 | INFO     | right removable region: 263
[2026-03-18 04:47:27] 2026-03-18 03:46:46,473 | INFO     | sum of square deviations: 5705372090.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,481 | INFO     | sum of deviations: -18125790100.000008
[2026-03-18 04:47:27] 2026-03-18 03:46:46,481 | INFO     | mean x: 1773797547.5
[2026-03-18 04:47:27] 2026-03-18 03:46:46,481 | INFO     | mean y: 2364336.492424242
[2026-03-18 04:47:27] 2026-03-18 03:46:46,481 | INFO     | intersect: 5637664106.376458
[2026-03-18 04:47:27] 2026-03-18 03:46:46,482 | INFO     | chi2: 0.06383645198960143
[2026-03-18 04:47:27] 2026-03-18 03:46:46,482 | INFO     | current chi2=0.06383645198960143 (change=94.22408168829882 %)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,482 | INFO     | sum of square deviations: 5387301010.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,483 | INFO     | sum of deviations: -8759500387.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,483 | INFO     | mean x: 1773797700.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,483 | INFO     | mean y: 2359856.3513513515
[2026-03-18 04:47:27] 2026-03-18 03:46:46,483 | INFO     | intersect: 2886472255.2629
[2026-03-18 04:47:27] 2026-03-18 03:46:46,483 | INFO     | chi2: 0.017144047461959338
[2026-03-18 04:47:27] 2026-03-18 03:46:46,483 | INFO     | current chi2=0.017144047461959338 (change=73.14379648675963 %)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,483 | INFO     | sum of square deviations: 5081276667.5
[2026-03-18 04:47:27] 2026-03-18 03:46:46,484 | INFO     | sum of deviations: -6179365392.000004
[2026-03-18 04:47:27] 2026-03-18 03:46:46,484 | INFO     | mean x: 1773797852.5
[2026-03-18 04:47:27] 2026-03-18 03:46:46,484 | INFO     | mean y: 2358569.9527559057
[2026-03-18 04:47:27] 2026-03-18 03:46:46,485 | INFO     | intersect: 2159482808.482999
[2026-03-18 04:47:27] 2026-03-18 03:46:46,485 | INFO     | chi2: 0.014446715628114823
[2026-03-18 04:47:27] 2026-03-18 03:46:46,485 | INFO     | current chi2=0.014446715628114823 (change=15.73334324831743 %)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,485 | INFO     | left removable region: 30
[2026-03-18 04:47:27] 2026-03-18 03:46:46,485 | INFO     | sum of square deviations: 3922276332.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,486 | INFO     | sum of deviations: -639399621.0000005
[2026-03-18 04:47:27] 2026-03-18 03:46:46,486 | INFO     | mean x: 1773798127.0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,486 | INFO     | mean y: 2354988.0042918455
[2026-03-18 04:47:27] 2026-03-18 03:46:46,486 | INFO     | intersect: 291515096.6078564
[2026-03-18 04:47:27] 2026-03-18 03:46:46,486 | INFO     | chi2: 0.007813210546238515
[2026-03-18 04:47:27] 2026-03-18 03:46:46,486 | INFO     | current memory leak: -0.16 B/s (using 233 data points, chi2=0.01)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | could have reported an average CPU frequency of 3539 MHz (13 samples)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | ..............................
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . Timing measurements:
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . get job = 0 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . initial setup = 18 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . payload setup = 19 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . stage-in = 0 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . payload execution = 16394 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . stage-out = 0 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | . log creation = 0 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,487 | INFO     | ..............................
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | 
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | job summary report
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | --------------------------------------------------
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | PanDA job id: 7056936784
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | task id: 49178447
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | errors: (none)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | pilot state: finished 
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | transexitcode: 0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | exeerrorcode: 0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | exeerrordiag: 
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | exitcode: 0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | exitmsg: OK
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | cpuconsumptiontime: 61367 s
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | nevents: 400
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | neventsw: 0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | pid: 2449805
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | pgrp: 2449805
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | corecount: 4
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | event service: False
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | sizes: {0: 2279806, 1: 2280323, 12: 2280323, 16417: 2312572, 16419: 2321594, 16421: 2321650, 16422: 2321972}
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | --------------------------------------------------
[2026-03-18 04:47:27] 2026-03-18 03:46:46,576 | INFO     | 
[2026-03-18 04:47:27] 2026-03-18 03:46:46,577 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-18 04:47:27] 2026-03-18 03:46:46,697 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | job 7056936784 has completed (purged errors)
[2026-03-18 04:47:27] 2026-03-18 03:46:46,698 | INFO     | overall cleanup function is called
[2026-03-18 04:47:27] 2026-03-18 03:46:47,404 | INFO     | PID=2443362 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-18 04:47:27] 2026-03-18 03:46:47,404 | INFO     | .. there are 49 such processes running
[2026-03-18 04:47:27] 2026-03-18 03:46:47,705 | INFO     | --- collectZombieJob: --- 10, [2449805]
[2026-03-18 04:47:27] 2026-03-18 03:46:47,705 | INFO     | zombie collector waiting for pid 2449805
[2026-03-18 04:47:27] 2026-03-18 03:46:47,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 04:47:27] 2026-03-18 03:46:47,705 | INFO     | collected zombie processes
[2026-03-18 04:47:27] 2026-03-18 03:46:47,705 | INFO     | will attempt to kill all subprocesses of pid=2449805
[2026-03-18 04:47:27] 2026-03-18 03:46:48,302 | INFO     | process IDs to be killed: [2449805] (in reverse order)
[2026-03-18 04:47:27] 2026-03-18 03:46:48,622 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 04:47:27] 2026-03-18 03:46:48,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 04:47:27] 2026-03-18 03:46:48,653 | INFO     | did not find any defunct processes belonging to 2449805
[2026-03-18 04:47:27] 2026-03-18 03:46:48,683 | INFO     | did not find any defunct processes belonging to 2449805
[2026-03-18 04:47:27] 2026-03-18 03:46:48,683 | INFO     | ready for new job
[2026-03-18 04:47:27] 2026-03-18 03:46:48,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 04:47:27] 2026-03-18 03:46:48,685 | INFO     | **************************************
[2026-03-18 04:47:27] 2026-03-18 03:46:48,685 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 04:47:27] 2026-03-18 03:46:48,685 | INFO     | **************************************
[2026-03-18 04:47:27] 2026-03-18 03:46:48,685 | INFO     | 
[2026-03-18 04:47:27] 2026-03-18 03:46:48,691 | INFO     | architecture information:
[2026-03-18 04:47:27] 2026-03-18 03:46:48,691 | INFO     | executing command: cat /etc/os-release
[2026-03-18 04:47:27] 2026-03-18 03:46:48,714 | INFO     | cat /etc/os-release:
[2026-03-18 04:47:27] NAME="CentOS Linux"
[2026-03-18 04:47:27] VERSION="7 (Core)"
[2026-03-18 04:47:27] ID="centos"
[2026-03-18 04:47:27] ID_LIKE="rhel fedora"
[2026-03-18 04:47:27] VERSION_ID="7"
[2026-03-18 04:47:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 04:47:27] ANSI_COLOR="0;31"
[2026-03-18 04:47:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 04:47:27] HOME_URL="https://www.centos.org/"
[2026-03-18 04:47:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 04:47:27] 
[2026-03-18 04:47:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 04:47:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 04:47:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 04:47:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 04:47:27] 
[2026-03-18 04:47:27] 2026-03-18 03:46:48,715 | INFO     | **************************************
[2026-03-18 04:47:27] 2026-03-18 03:46:49,218 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-18 04:47:27] 2026-03-18 03:46:49,239 | INFO     | sufficient remaining disk space (21441282048 B)
[2026-03-18 04:47:27] 2026-03-18 03:46:49,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 04:47:27] 2026-03-18 03:46:49,240 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 04:47:27] 2026-03-18 03:46:49,240 | INFO     | update_server=False
[2026-03-18 04:47:27] 2026-03-18 03:46:49,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 04:47:27] 2026-03-18 03:46:49,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 04:47:27] 2026-03-18 03:46:49,335 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 04:47:27] 2026-03-18 03:46:49,335 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 04:47:27] 2026-03-18 03:46:49,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 04:47:27] 2026-03-18 03:46:49,335 | INFO     | will abort loop
[2026-03-18 04:47:27] 2026-03-18 03:46:50,020 | INFO     | all job control threads have been joined
[2026-03-18 04:47:27] 2026-03-18 03:46:50,097 | INFO     | all data control threads have been joined
[2026-03-18 04:47:27] 2026-03-18 03:46:50,245 | INFO     | [job] retrieve thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:50,340 | INFO     | [job] job monitor thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:50,362 | INFO     | all payload control threads have been joined
[2026-03-18 04:47:27] 2026-03-18 03:46:50,386 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:50,901 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,026 | INFO     | [job] control thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,102 | INFO     | [data] control thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,122 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,245 | INFO     | [data] copytool_out thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,340 | INFO     | [job] validate thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,363 | INFO     | [data] copytool_in thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,367 | INFO     | [payload] control thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 04:47:27] 2026-03-18 03:46:51,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 04:47:27] 2026-03-18 03:46:51,601 | INFO     | [payload] failed_post thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:51,815 | INFO     | [payload] validate_post thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:52,591 | INFO     | [job] queue monitor thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:46:55,439 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 04:47:27] 2026-03-18 03:47:19,975 | INFO     | [monitor] cgroup control has ended
[2026-03-18 04:47:27] 2026-03-18 03:47:20,339 | INFO     | PID=2443362 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 04:47:27] 2026-03-18 03:47:20,339 | INFO     | .. there are 49 such processes running
[2026-03-18 04:47:27] 2026-03-18 03:47:20,339 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 04:47:27] 2026-03-18 03:47:20,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 04:47:27] 2026-03-18 03:47:20,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 04:47:27] 2026-03-18 03:47:21,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23133838694208)>', '<ExcThread(monitor, started 23133596948224)>']
[2026-03-18 04:47:27] 2026-03-18 03:47:22,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 04:47:27] 2026-03-18 03:47:22,350 | INFO     | [monitor] control thread has ended
[2026-03-18 04:47:27] 2026-03-18 03:47:26,947 | INFO     | all workflow threads have been joined
[2026-03-18 04:47:27] 2026-03-18 03:47:26,947 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 04:47:27] 2026-03-18 03:47:26,947 | INFO     | traces error code: 0
[2026-03-18 04:47:27] 2026-03-18 03:47:26,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 04:47:27] 2026-03-18 03:47:27,193 [wrapper] ==== pilot stdout END ====
[2026-03-18 04:47:27] 2026-03-18 03:47:27,207 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 04:47:27] 2026-03-18 03:47:27,210 [wrapper] pilotpid: 2443362
[2026-03-18 04:47:27] 2026-03-18 03:47:27,219 [wrapper] Pilot exit status: 0
[2026-03-18 04:47:27] 2026-03-18 03:47:27,281 [wrapper] pandaids: 7056936784
[2026-03-18 04:47:27] 2026-03-18 03:47:27,449 [wrapper] cleanup supervisor_pilot 3748692 2443363
[2026-03-18 04:47:27] 2026-03-18 03:47:27,472 [wrapper] Test setup, not cleaning
[2026-03-18 04:47:27] 2026-03-18 03:47:27,481 [wrapper] apfmon messages muted
[2026-03-18 04:47:27] 2026-03-18 03:47:27,499 [wrapper] ==== wrapper stdout END ====
[2026-03-18 04:47:27] 2026-03-18 03:47:27,514 [wrapper] ==== wrapper stderr END ====
[2026-03-18 04:47:27]  *** Error codes and diagnostics ***
[2026-03-18 04:47:27]     "exeErrorCode": 0,
[2026-03-18 04:47:27]     "exeErrorDiag": "",
[2026-03-18 04:47:27]     "pilotErrorCode": 0,
[2026-03-18 04:47:27]     "pilotErrorDiag": "",
[2026-03-18 04:47:27]  *** Listing of results directory ***
[2026-03-18 04:47:27] total 490192
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc    585013 Mar 16 15:05 pilot3.tar.gz
[2026-03-18 04:47:27] -rwx------. 1 boinc boinc     36322 Mar 16 15:05 runpilot2-wrapper.sh
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc      5111 Mar 16 15:05 queuedata.json
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc       100 Mar 18 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 04:47:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 00:11 run_atlas
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc       105 Mar 18 00:11 job.xml
[2026-03-18 04:47:27] -rw-r--r--. 2 boinc boinc     15845 Mar 18 00:12 start_atlas.sh
[2026-03-18 04:47:27] drwxrwx--x. 2 boinc boinc      4096 Mar 18 00:12 shared
[2026-03-18 04:47:27] -rw-r--r--. 2 boinc boinc    597536 Mar 18 00:12 input.tar.gz
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc      6707 Mar 18 00:12 init_data.xml
[2026-03-18 04:47:27] -rw-r--r--. 2 boinc boinc 244510200 Mar 18 00:12 EVNT.49128800._000005.pool.root.1
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc         0 Mar 18 00:12 boinc_lockfile
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc      2600 Mar 18 00:12 pandaJob.out
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc   1011333 Mar 18 00:12 agis_schedconf.cvmfs.json
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc       445 Mar 18 00:12 workernode_map.json
[2026-03-18 04:47:27] drwx------. 5 boinc boinc      4096 Mar 18 00:12 pilot3
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc 248055665 Mar 18 04:46 HITS.49178447._000125.pool.root.1
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc       530 Mar 18 04:46 boinc_task_state.xml
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc      1047 Mar 18 04:46 memory_monitor_summary.json
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc   1511579 Mar 18 04:46 agis_ddmendpoints.agis.ALL.json
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc    449663 Mar 18 04:46 log.49178447._000125.job.log.tgz.1
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc      6354 Mar 18 04:46 heartbeat.json
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc        95 Mar 18 04:47 pilot_heartbeat.json
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc      8192 Mar 18 04:47 boinc_mmap_file
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc        28 Mar 18 04:47 wrapper_checkpoint.txt
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc      5016 Mar 18 04:47 pilotlog.txt
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc   2276548 Mar 18 04:47 log.49178447._000125.job.log.1
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc       357 Mar 18 04:47 output.list
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc       620 Mar 18 04:47 runtime_log
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc   2744320 Mar 18 04:47 result.tar.gz
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc      9222 Mar 18 04:47 runtime_log.err
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc       666 Mar 18 04:47 01oKDmMkNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmSxLDmZUn8dm.diag
[2026-03-18 04:47:27] -rw-r--r--. 1 boinc boinc     20966 Mar 18 04:47 stderr.txt
[2026-03-18 04:47:27] HITS file was successfully produced:
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc 248055665 Mar 18 04:46 shared/HITS.pool.root.1
[2026-03-18 04:47:27]  *** Contents of shared directory: ***
[2026-03-18 04:47:27] total 484312
[2026-03-18 04:47:27] -rw-r--r--. 2 boinc boinc     15845 Mar 18 00:12 start_atlas.sh
[2026-03-18 04:47:27] -rw-r--r--. 2 boinc boinc    597536 Mar 18 00:12 input.tar.gz
[2026-03-18 04:47:27] -rw-r--r--. 2 boinc boinc 244510200 Mar 18 00:12 ATLAS.root_0
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc 248055665 Mar 18 04:46 HITS.pool.root.1
[2026-03-18 04:47:27] -rw-------. 1 boinc boinc   2744320 Mar 18 04:47 result.tar.gz
04:47:29 (2438487): run_atlas exited; CPU time 62179.097335
04:47:29 (2438487): called boinc_finish(0)

</stderr_txt>
]]>

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