Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:15:53 (1208596): wrapper (7.7.26015): starting
02:15:53 (1208596): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 02:15:53] Arguments: --nthreads 4
[2026-03-19 02:15:53] Threads: 4
[2026-03-19 02:15:53] Checking for CVMFS
[2026-03-19 02:15:53] No cvmfs_config command found, will try listing directly
[2026-03-19 02:15:53] CVMFS is ok
[2026-03-19 02:15:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:15:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:15:53] Further information can be found at the LHC@home message board.
[2026-03-19 02:15:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:15:53] Checking for apptainer binary...
[2026-03-19 02:15:53] which: no apptainer in ((null))
[2026-03-19 02:15:53] apptainer is not installed, using version from CVMFS
[2026-03-19 02:15:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:15:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-19 02:15:54] apptainer works
[2026-03-19 02:15:54] Set ATHENA_PROC_NUMBER=4
[2026-03-19 02:15:54] Set ATHENA_CORE_NUMBER=4
[2026-03-19 02:15:54] Starting ATLAS job with PandaID=7056933927
[2026-03-19 02:15:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 06:39:23]  *** The last 200 lines of the pilot log: ***
[2026-03-19 06:39:23] 2026-03-19 05:37:43,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,624 | INFO     | job 7056933927 has state=finished
[2026-03-19 06:39:23] 2026-03-19 05:37:43,624 | INFO     | preparing for final server update for job 7056933927 in state='finished'
[2026-03-19 06:39:23] 2026-03-19 05:37:43,624 | INFO     | reading metadata from: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7056933927/jobReport.json
[2026-03-19 06:39:23] 2026-03-19 05:37:43,634 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot244/slots/0/workernode_map.json
[2026-03-19 06:39:23] 2026-03-19 05:37:43,635 | INFO     | this job has now completed (state=finished)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,635 | INFO     | log transfer has been attempted: DONE
[2026-03-19 06:39:23] 2026-03-19 05:37:43,635 | INFO     | job 7056933927 has finished - writing final server update
[2026-03-19 06:39:23] 2026-03-19 05:37:43,635 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_65956/.job.ad'
[2026-03-19 06:39:23] 2026-03-19 05:37:43,635 | INFO     | total number of processed events: 400 (read)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,654 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7056933927/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,654 | INFO     | extracted standard info from prmon json
[2026-03-19 06:39:23] 2026-03-19 05:37:43,654 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 06:39:23] 2026-03-19 05:37:43,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 06:39:23] 2026-03-19 05:37:43,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 06:39:23] 2026-03-19 05:37:43,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 06:39:23] 2026-03-19 05:37:43,657 | INFO     | fitting pss+swap vs Time
[2026-03-19 06:39:23] 2026-03-19 05:37:43,657 | INFO     | sum of square deviations: 5263458688.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,658 | INFO     | sum of deviations: 12884081328.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,658 | INFO     | mean x: 1773890800.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,658 | INFO     | mean y: 2356676.5992217897
[2026-03-19 06:39:23] 2026-03-19 05:37:43,658 | INFO     | intersect: -4339836297.442219
[2026-03-19 06:39:23] 2026-03-19 05:37:43,659 | INFO     | chi2: 1.0518353076393674
[2026-03-19 06:39:23] 2026-03-19 05:37:43,659 | INFO     | sum of square deviations: 4962187923.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | sum of deviations: 12413175205.499998
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | mean x: 1773890647.5
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | mean y: 2356438.2103174604
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | intersect: -4435124718.187099
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | chi2: 1.0520362462011634
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | current chi2=1.0520362462011634 (change=-0.01910361444768422 %)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | right removable region: 251
[2026-03-19 06:39:23] 2026-03-19 05:37:43,660 | INFO     | sum of square deviations: 4962187923.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,661 | INFO     | sum of deviations: -3998817210.4999995
[2026-03-19 06:39:23] 2026-03-19 05:37:43,662 | INFO     | mean x: 1773890952.5
[2026-03-19 06:39:23] 2026-03-19 05:37:43,662 | INFO     | mean y: 2365052.734126984
[2026-03-19 06:39:23] 2026-03-19 05:37:43,662 | INFO     | intersect: 1431868687.1145692
[2026-03-19 06:39:23] 2026-03-19 05:37:43,662 | INFO     | chi2: 0.011048896057216507
[2026-03-19 06:39:23] 2026-03-19 05:37:43,662 | INFO     | current chi2=0.011048896057216507 (change=98.94956026129094 %)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,662 | INFO     | sum of square deviations: 4672638308.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | sum of deviations: -2870598572.9999986
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | mean x: 1773891105.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | mean y: 2364455.6558704455
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | intersect: 1092140496.3034384
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | chi2: 0.010077308702743601
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | current chi2=0.010077308702743601 (change=8.793524252934935 %)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | left removable region: 20
[2026-03-19 06:39:23] 2026-03-19 05:37:43,663 | INFO     | sum of square deviations: 3822136780.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,664 | INFO     | sum of deviations: -171899098.00000054
[2026-03-19 06:39:23] 2026-03-19 05:37:43,664 | INFO     | mean x: 1773891227.0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,664 | INFO     | mean y: 2362671.212121212
[2026-03-19 06:39:23] 2026-03-19 05:37:43,664 | INFO     | intersect: 82142731.27355476
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | chi2: 0.006501394797344497
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | current memory leak: -0.04 B/s (using 231 data points, chi2=0.01)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | could have reported an average CPU frequency of 3549 MHz (12 samples)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | ..............................
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . Timing measurements:
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . get job = 0 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . initial setup = 5 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . payload setup = 8 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . stage-in = 0 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . payload execution = 15667 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . stage-out = 0 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | . log creation = 0 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,665 | INFO     | ..............................
[2026-03-19 06:39:23] 2026-03-19 05:37:43,714 | INFO     | 
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | job summary report
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | --------------------------------------------------
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | PanDA job id: 7056933927
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | task id: 49178217
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | errors: (none)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | pilot state: finished 
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | transexitcode: 0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | exeerrorcode: 0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | exeerrordiag: 
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | exitcode: 0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | exitmsg: OK
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | cpuconsumptiontime: 60677 s
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | nevents: 400
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | neventsw: 0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | pid: 1219086
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | pgrp: 1219086
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | corecount: 4
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | event service: False
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | sizes: {0: 2280314, 11: 2280314, 15678: 2311669, 15680: 2320691, 15683: 2320747, 15684: 2320941}
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | --------------------------------------------------
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | 
[2026-03-19 06:39:23] 2026-03-19 05:37:43,715 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,733 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,733 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 06:39:23] 2026-03-19 05:37:43,733 | INFO     | job 7056933927 has completed (purged errors)
[2026-03-19 06:39:23] 2026-03-19 05:37:43,733 | INFO     | overall cleanup function is called
[2026-03-19 06:39:23] 2026-03-19 05:37:44,739 | INFO     | --- collectZombieJob: --- 10, [1219086]
[2026-03-19 06:39:23] 2026-03-19 05:37:44,740 | INFO     | zombie collector waiting for pid 1219086
[2026-03-19 06:39:23] 2026-03-19 05:37:44,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 06:39:23] 2026-03-19 05:37:44,740 | INFO     | collected zombie processes
[2026-03-19 06:39:23] 2026-03-19 05:37:44,740 | INFO     | will attempt to kill all subprocesses of pid=1219086
[2026-03-19 06:39:23] 2026-03-19 05:37:45,274 | INFO     | process IDs to be killed: [1219086] (in reverse order)
[2026-03-19 06:39:23] 2026-03-19 05:37:45,487 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 06:39:23] 2026-03-19 05:37:45,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 06:39:23] 2026-03-19 05:37:45,519 | INFO     | did not find any defunct processes belonging to 1219086
[2026-03-19 06:39:23] 2026-03-19 05:37:45,552 | INFO     | did not find any defunct processes belonging to 1219086
[2026-03-19 06:39:23] 2026-03-19 05:37:45,553 | INFO     | ready for new job
[2026-03-19 06:39:23] 2026-03-19 05:37:45,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 06:39:23] 2026-03-19 05:37:45,554 | INFO     | **************************************
[2026-03-19 06:39:23] 2026-03-19 05:37:45,558 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 06:39:23] 2026-03-19 05:37:45,558 | INFO     | **************************************
[2026-03-19 06:39:23] 2026-03-19 05:37:45,558 | INFO     | 
[2026-03-19 06:39:23] 2026-03-19 05:37:45,564 | INFO     | architecture information:
[2026-03-19 06:39:23] 2026-03-19 05:37:45,564 | INFO     | executing command: cat /etc/os-release
[2026-03-19 06:39:23] 2026-03-19 05:37:45,579 | INFO     | cat /etc/os-release:
[2026-03-19 06:39:23] NAME="CentOS Linux"
[2026-03-19 06:39:23] VERSION="7 (Core)"
[2026-03-19 06:39:23] ID="centos"
[2026-03-19 06:39:23] ID_LIKE="rhel fedora"
[2026-03-19 06:39:23] VERSION_ID="7"
[2026-03-19 06:39:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 06:39:23] ANSI_COLOR="0;31"
[2026-03-19 06:39:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 06:39:23] HOME_URL="https://www.centos.org/"
[2026-03-19 06:39:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 06:39:23] 
[2026-03-19 06:39:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 06:39:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 06:39:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 06:39:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 06:39:23] 
[2026-03-19 06:39:23] 2026-03-19 05:37:45,580 | INFO     | **************************************
[2026-03-19 06:39:23] 2026-03-19 05:37:46,082 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-19 06:39:23] 2026-03-19 05:37:46,098 | INFO     | sufficient remaining disk space (36858494976 B)
[2026-03-19 06:39:23] 2026-03-19 05:37:46,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 06:39:23] 2026-03-19 05:37:46,099 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 06:39:23] 2026-03-19 05:37:46,099 | INFO     | update_server=False
[2026-03-19 06:39:23] 2026-03-19 05:37:46,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 06:39:23] 2026-03-19 05:37:46,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 06:39:23] 2026-03-19 05:37:46,115 | INFO     | all job control threads have been joined
[2026-03-19 06:39:23] 2026-03-19 05:37:46,435 | INFO     | all data control threads have been joined
[2026-03-19 06:39:23] 2026-03-19 05:37:46,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:39:23] 2026-03-19 05:37:46,788 | INFO     | aborting loop
[2026-03-19 06:39:23] 2026-03-19 05:37:47,105 | INFO     | [job] retrieve thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,116 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,120 | INFO     | [job] control thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,342 | INFO     | [payload] failed_post thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,389 | INFO     | [data] copytool_in thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,441 | INFO     | [data] control thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,462 | INFO     | all payload control threads have been joined
[2026-03-19 06:39:23] 2026-03-19 05:37:47,524 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,535 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:47,793 | INFO     | [job] job monitor thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:48,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 06:39:23] 2026-03-19 05:37:48,105 | INFO     | [data] copytool_out thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:48,158 | INFO     | [payload] validate_post thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:48,278 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:48,467 | INFO     | [payload] control thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:48,549 | INFO     | [job] validate thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:48,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:39:23] 2026-03-19 05:37:49,729 | INFO     | [job] queue monitor thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:37:52,097 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 06:39:23] 2026-03-19 05:38:16,447 | INFO     | PID=1213203 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 06:39:23] 2026-03-19 05:38:16,447 | INFO     | .. there are 40 such processes running
[2026-03-19 06:39:23] 2026-03-19 05:38:16,447 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 06:39:23] 2026-03-19 05:38:16,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 06:39:23] 2026-03-19 05:38:16,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 06:39:23] 2026-03-19 05:38:33,767 | INFO     | [monitor] cgroup control has ended
[2026-03-19 06:39:23] 2026-03-19 05:38:35,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22608955160384)>', '<ExcThread(monitor, started 22608634431232)>']
[2026-03-19 06:39:23] 2026-03-19 05:38:35,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 06:39:23] 2026-03-19 05:38:35,544 | INFO     | [monitor] control thread has ended
[2026-03-19 06:39:23] 2026-03-19 05:38:40,257 | INFO     | all workflow threads have been joined
[2026-03-19 06:39:23] 2026-03-19 05:38:40,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 06:39:23] 2026-03-19 05:38:40,257 | INFO     | traces error code: 0
[2026-03-19 06:39:23] 2026-03-19 05:38:40,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 06:39:23] 2026-03-19 05:38:40,568 [wrapper] ==== pilot stdout END ====
[2026-03-19 06:39:23] 2026-03-19 05:38:40,571 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 06:39:23] 2026-03-19 05:38:40,575 [wrapper] pilotpid: 1213203
[2026-03-19 06:39:23] 2026-03-19 05:38:40,577 [wrapper] Pilot exit status: 0
[2026-03-19 06:39:23] 2026-03-19 05:38:40,584 [wrapper] pandaids: 7056933927
[2026-03-19 06:39:23] 2026-03-19 05:38:40,733 [wrapper] cleanup supervisor_pilot 2258902 1213204
[2026-03-19 06:39:23] 2026-03-19 05:38:40,737 [wrapper] Test setup, not cleaning
[2026-03-19 06:39:23] 2026-03-19 05:38:40,740 [wrapper] apfmon messages muted
[2026-03-19 06:39:23] 2026-03-19 05:38:40,742 [wrapper] ==== wrapper stdout END ====
[2026-03-19 06:39:23] 2026-03-19 05:38:40,744 [wrapper] ==== wrapper stderr END ====
[2026-03-19 06:39:23]  *** Error codes and diagnostics ***
[2026-03-19 06:39:23]     "exeErrorCode": 0,
[2026-03-19 06:39:23]     "exeErrorDiag": "",
[2026-03-19 06:39:23]     "pilotErrorCode": 0,
[2026-03-19 06:39:23]     "pilotErrorDiag": "",
[2026-03-19 06:39:23]  *** Listing of results directory ***
[2026-03-19 06:39:23] total 493544
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc    585013 Mar 16 15:05 pilot3.tar.gz
[2026-03-19 06:39:23] -rwx------. 1 boinc boinc     36322 Mar 16 15:05 runpilot2-wrapper.sh
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc      5111 Mar 16 15:05 queuedata.json
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc       100 Mar 19 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 06:39:23] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 02:15 run_atlas
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc       105 Mar 19 02:15 job.xml
[2026-03-19 06:39:23] -rw-r--r--. 2 boinc boinc 242699818 Mar 19 02:15 EVNT.49128307._000006.pool.root.1
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc      6707 Mar 19 02:15 init_data.xml
[2026-03-19 06:39:23] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:15 start_atlas.sh
[2026-03-19 06:39:23] drwxrwx--x. 2 boinc boinc      4096 Mar 19 02:15 shared
[2026-03-19 06:39:23] -rw-r--r--. 2 boinc boinc    597537 Mar 19 02:15 input.tar.gz
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc         0 Mar 19 02:15 boinc_lockfile
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc      2614 Mar 19 02:15 pandaJob.out
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc   1010446 Mar 19 02:16 agis_schedconf.cvmfs.json
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc       444 Mar 19 02:16 workernode_map.json
[2026-03-19 06:39:23] drwx------. 5 boinc boinc      4096 Mar 19 02:16 pilot3
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc 253558161 Mar 19 06:37 HITS.49178217._000127.pool.root.1
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc       529 Mar 19 06:37 boinc_task_state.xml
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc      1029 Mar 19 06:37 memory_monitor_summary.json
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc   1511579 Mar 19 06:37 agis_ddmendpoints.agis.ALL.json
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc    410598 Mar 19 06:37 log.49178217._000127.job.log.tgz.1
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc      6342 Mar 19 06:37 heartbeat.json
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc        95 Mar 19 06:38 pilot_heartbeat.json
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc      4830 Mar 19 06:38 pilotlog.txt
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc   2186815 Mar 19 06:38 log.49178217._000127.job.log.1
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc       357 Mar 19 06:38 output.list
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc       620 Mar 19 06:38 runtime_log
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc   2611200 Mar 19 06:38 result.tar.gz
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc      9222 Mar 19 06:38 runtime_log.err
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc       666 Mar 19 06:38 5gXMDmEkNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpFuLDmKzLq0m.diag
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc        27 Mar 19 06:39 wrapper_checkpoint.txt
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc      8192 Mar 19 06:39 boinc_mmap_file
[2026-03-19 06:39:23] -rw-r--r--. 1 boinc boinc     21161 Mar 19 06:39 stderr.txt
[2026-03-19 06:39:23] HITS file was successfully produced:
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc 253558161 Mar 19 06:37 shared/HITS.pool.root.1
[2026-03-19 06:39:23]  *** Contents of shared directory: ***
[2026-03-19 06:39:23] total 487788
[2026-03-19 06:39:23] -rw-r--r--. 2 boinc boinc 242699818 Mar 19 02:15 ATLAS.root_0
[2026-03-19 06:39:23] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:15 start_atlas.sh
[2026-03-19 06:39:23] -rw-r--r--. 2 boinc boinc    597537 Mar 19 02:15 input.tar.gz
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc 253558161 Mar 19 06:37 HITS.pool.root.1
[2026-03-19 06:39:23] -rw-------. 1 boinc boinc   2611200 Mar 19 06:38 result.tar.gz
06:39:25 (1208596): run_atlas exited; CPU time 61476.737351
06:39:25 (1208596): called boinc_finish(0)

</stderr_txt>
]]>

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