Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-16 19:57:29 (27564): vboxwrapper version 26210
2026-03-16 19:57:29 (27564): BOINC client version: 8.2.4
2026-03-16 19:57:37 (27564): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-03-16 19:57:37 (27564): Successfully copied 'init_data.xml' to the shared directory.
2026-03-16 19:57:38 (27564): Create VM. (boinc_322fdda8a4652397, slot#0)
2026-03-16 19:57:39 (27564): Setting Memory Size for VM. (4200MB)
2026-03-16 19:57:40 (27564): Setting CPU Count for VM. (2)
2026-03-16 19:57:40 (27564): Setting Chipset Options for VM.
2026-03-16 19:57:40 (27564): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-16 19:57:41 (27564): Setting Boot Options for VM.
2026-03-16 19:57:41 (27564): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-16 19:57:42 (27564): Enabling VM Network Access.
2026-03-16 19:57:42 (27564): Disabling USB Support for VM.
2026-03-16 19:57:42 (27564): Disabling COM Port Support for VM.
2026-03-16 19:57:43 (27564): Disabling LPT Port Support for VM.
2026-03-16 19:57:44 (27564): Disabling Audio Support for VM.
2026-03-16 19:57:44 (27564): Disabling Clipboard Support for VM.
2026-03-16 19:57:44 (27564): Disabling Drag and Drop Support for VM.
2026-03-16 19:57:45 (27564): Adding storage controller(s) to VM.
2026-03-16 19:57:45 (27564): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-16 19:57:48 (27564): Adding VirtualBox Guest Additions to VM.
2026-03-16 19:57:49 (27564): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-16 19:57:50 (27564): forwarding host port 64359 to guest port 80
2026-03-16 19:57:50 (27564): Enabling remote desktop for VM.
2026-03-16 19:57:50 (27564): Required extension pack not installed, remote desktop not enabled.
2026-03-16 19:57:50 (27564): Enabling shared directory for VM.
2026-03-16 19:57:51 (27564): Starting VM using VBoxManage interface. (boinc_322fdda8a4652397, slot#0)
2026-03-16 19:58:10 (27564): Successfully started VM. (PID = '18968')
2026-03-16 19:58:10 (27564): Reporting VM Process ID to BOINC.
2026-03-16 19:58:10 (27564): Guest Log: BIOS: VirtualBox 7.2.2
2026-03-16 19:58:10 (27564): Guest Log: CPUID EDX: 0x178bfbff
2026-03-16 19:58:10 (27564): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-16 19:58:10 (27564): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-16 19:58:10 (27564): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-16 19:58:10 (27564): Detected: Web Application Enabled (http://localhost:64359)
2026-03-16 19:58:10 (27564): Preference change detected
2026-03-16 19:58:10 (27564): Setting CPU throttle for VM. (100%)
2026-03-16 19:58:10 (27564): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-16 19:58:12 (27564): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-16 19:58:12 (27564): Guest Log: BIOS: Booting from Hard Disk...
2026-03-16 19:58:17 (27564): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-16 19:58:17 (27564): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-16 19:58:17 (27564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-16 19:58:32 (27564): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-16 19:58:32 (27564): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-16 19:59:16 (27564): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-16 19:59:16 (27564): Guest Log: 00:00:00.000281 main     Log opened 2026-03-16T19:59:15.742717000Z
2026-03-16 19:59:17 (27564): Guest Log: 00:00:00.000510 main     OS Product: Linux
2026-03-16 19:59:17 (27564): Guest Log: 00:00:00.000583 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-16 19:59:17 (27564): Guest Log: 00:00:00.000639 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-16 19:59:17 (27564): Guest Log: 00:00:00.000723 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-16 19:59:17 (27564): Guest Log: 00:00:00.000724 main     Process ID: 1258
2026-03-16 19:59:17 (27564): Guest Log: 00:00:00.000725 main     Package type: LINUX_64BITS_GENERIC
2026-03-16 19:59:17 (27564): Guest Log: 00:00:00.001805 main     5.2.32 r132073 started. Verbose level = 0
2026-03-16 19:59:17 (27564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-16 19:59:17 (27564): Guest Log: [INFO] Mounting shared directory
2026-03-16 19:59:17 (27564): Guest Log: [INFO] Checking for init_data.xml
2026-03-16 19:59:24 (27564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-16 19:59:24 (27564): Guest Log: [INFO] Detected branch: prod
2026-03-16 19:59:24 (27564): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-16 19:59:24 (27564): Guest Log: Copying input files
2026-03-16 19:59:27 (27564): Guest Log: 00:00:10.031442 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 246 024 000ns (GuestNow=1 773 687 566 523 891 000 ns GuestLast=1 773 691 155 769 915 000 ns fSetTimeLastLoop=true )
2026-03-16 19:59:29 (27564): Guest Log: Copied input files into RunAtlas.
2026-03-16 19:59:29 (27564): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-16 19:59:29 (27564): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-16 19:59:29 (27564): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-16 19:59:29 (27564): Guest Log: Further information can be found at the LHC@home message board.
2026-03-16 19:59:40 (27564): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-16 19:59:41 (27564): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-16 19:59:41 (27564): Guest Log: 2.6.3.0 1534 0 32032 157351 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-16 19:59:48 (27564): Guest Log: copied the webapp to /var/www
2026-03-16 19:59:48 (27564): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-16 19:59:48 (27564): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-16 19:59:48 (27564): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-16 19:59:48 (27564): Guest Log:  *** Starting ATLAS job. (PandaID=7056931456 taskID=49178033) ***
2026-03-16 20:15:32 (27564): Guest Log:  *** Job finished ***
2026-03-16 20:15:32 (27564): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:13:47,438 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:13:47,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:14,018 | INFO     | [monitor] cgroup control has ended
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:14,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970862921536)>', '<ExcThread(monitor, started 139970132031232)>']
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:15,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:15,601 | INFO     | [monitor] control thread has ended
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:19,724 | INFO     | all workflow threads have been joined
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:19,725 | INFO     | end of generic workflow (traces error code: 0)
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:19,725 | INFO     | traces error code: 0
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:19,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,237 [wrapper] ==== pilot stdout END ====
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,258 [wrapper] ==== wrapper stdout RESUME ====
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,277 [wrapper] pilotpid: 5921
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,304 [wrapper] Pilot exit status: 0
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,516 [wrapper] pandaids: 7056931456
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,648 [wrapper] cleanup supervisor_pilot  5927 5922
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,666 [wrapper] Test setup, not cleaning
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,693 [wrapper] apfmon messages muted
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,714 [wrapper] ==== wrapper stdout END ====
2026-03-16 20:15:32 (27564): Guest Log: 2026-03-16 19:14:20,730 [wrapper] ==== wrapper stderr END ====
2026-03-16 20:15:32 (27564): Guest Log:  *** Error codes and diagnostics ***
2026-03-16 20:15:32 (27564): Guest Log:     "exeErrorCode": 65,
2026-03-16 20:15:32 (27564): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-16 20:15:32 (27564): Guest Log:     "pilotErrorCode": 1305,
2026-03-16 20:15:32 (27564): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-16 20:15:32 (27564): Guest Log:  *** Listing of results directory ***
2026-03-16 20:15:32 (27564): Guest Log: total 4328
2026-03-16 20:15:32 (27564): Guest Log: -rw-r--r--. 1 atlas atlas  585013 Mar 16 13:19 pilot3.tar.gz
2026-03-16 20:15:32 (27564): Guest Log: -rwx------. 1 atlas atlas   36322 Mar 16 13:34 runpilot2-wrapper.sh
2026-03-16 20:15:32 (27564): Guest Log: -rwxr-xr-x. 1 atlas atlas    5627 Mar 16 18:59 init_data.xml
2026-03-16 20:15:32 (27564): Guest Log: -rwxr-xr-x. 1 atlas atlas  596130 Mar 16 18:59 input.tar.gz
2026-03-16 20:15:32 (27564): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Mar 16 18:59 start_atlas.sh
2026-03-16 20:15:32 (27564): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 16 18:59 EVNT.49127910._000003.pool.root.1 -> /data/./ATLAS.root_0
2026-03-16 20:15:32 (27564): Guest Log: -rw-r--r--. 1 atlas atlas    2603 Mar 16 18:59 pandaJob.out
2026-03-16 20:15:32 (27564): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar 16 19:01 queuedata.json
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas 1006429 Mar 16 19:01 agis_schedconf.cvmfs.json
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas 1511579 Mar 16 19:01 agis_ddmendpoints.agis.ALL.json
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas     429 Mar 16 19:02 workernode_map.json
2026-03-16 20:15:32 (27564): Guest Log: drwx------. 5 atlas atlas    4096 Mar 16 19:02 pilot3
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas   55357 Mar 16 19:11 log.49178033._000053.job.log.tgz.1
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas      95 Mar 16 19:12 pilot_heartbeat.json
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas    6740 Mar 16 19:13 heartbeat.json
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas    4801 Mar 16 19:14 pilotlog.txt
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas  232124 Mar 16 19:14 log.49178033._000053.job.log.1
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas     188 Mar 16 19:14 output.list
2026-03-16 20:15:32 (27564): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 16 19:14 runtime_log
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas  307200 Mar 16 19:14 result.tar.gz
2026-03-16 20:15:32 (27564): Guest Log: -rw-r--r--. 1 atlas atlas    8628 Mar 16 19:14 runtime_log.err
2026-03-16 20:15:32 (27564): Guest Log: -rw-------. 1 atlas atlas     655 Mar 16 19:14 iG9KDm1GNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCPxLDmqWaiwm.diag
2026-03-16 20:15:32 (27564): Guest Log: Looking for outputfile HITS.49178033._000053.pool.root.1
2026-03-16 20:15:32 (27564): Guest Log: No HITS file was produced
2026-03-16 20:15:32 (27564): Guest Log: Successfully finished the ATLAS job!
2026-03-16 20:15:32 (27564): Guest Log: Copying the results back to the shared directory!
2026-03-16 20:15:32 (27564): Guest Log:  *** Contents of shared directory: ***
2026-03-16 20:15:32 (27564): Guest Log: total 240284
2026-03-16 20:15:32 (27564): Guest Log: -rwxrwxrwx. 1 root root 245119116 Mar 16 18:57 ATLAS.root_0
2026-03-16 20:15:32 (27564): Guest Log: -rwxrwxrwx. 1 root root      5627 Mar 16 18:57 init_data.xml
2026-03-16 20:15:32 (27564): Guest Log: -rwxrwxrwx. 1 root root    596130 Mar 16 15:09 input.tar.gz
2026-03-16 20:15:32 (27564): Guest Log: -rwxrwxrwx. 1 root root    307200 Mar 16 19:14 result.tar.gz
2026-03-16 20:15:32 (27564): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 16 15:09 start_atlas.sh
2026-03-16 20:15:32 (27564): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-16 20:15:32 (27564): Guest Log: 00:15:17.752408 control  Guest control service stopped
2026-03-16 20:15:32 (27564): Guest Log: 00:15:18.445033 control  Guest control worker returned with rc=VINF_SUCCESS
2026-03-16 20:15:32 (27564): Guest Log: 00:15:18.445234 main     Session 0 is about to close ...
2026-03-16 20:15:32 (27564): Guest Log: 00:15:18.445292 main     Stopping all guest processes ...
2026-03-16 20:15:32 (27564): Guest Log: 00:15:18.445346 main     Closing all guest files ...
2026-03-16 20:15:32 (27564): Guest Log: 00:15:18.711249 main     Ended.
2026-03-16 20:15:32 (27564): VM Completion File Detected.
2026-03-16 20:15:32 (27564): Powering off VM.
2026-03-16 20:16:24 (27564): Successfully stopped VM.
2026-03-16 20:16:25 (27564): Deregistering VM. (boinc_322fdda8a4652397, slot#0)
2026-03-16 20:16:58 (27564): Removing network bandwidth throttle group from VM.
2026-03-16 20:16:59 (27564): Removing VM from VirtualBox.
2026-03-16 20:17:10 (27564): called boinc_finish(0)

</stderr_txt>
]]>

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