Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:32:49 (13237): wrapper (7.7.26015): starting
14:32:49 (13237): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 14:32:49] Arguments: --nthreads 8
[2026-03-17 14:32:49] Threads: 8
[2026-03-17 14:32:49] Checking for CVMFS
[2026-03-17 14:32:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 14:32:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 14:32:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 14:32:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 14:32:53] 2.11.2.0 28598 131959 137464 157373 0 53 22855458 25165824 4511 130560 161 43211882 99.842 27225136 914 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-17 14:32:53] CVMFS is ok
[2026-03-17 14:32:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 14:32:53] Checking for apptainer binary...
[2026-03-17 14:32:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 14:32:53] Running /usr/bin/apptainer --version
[2026-03-17 14:32:53] apptainer version 1.3.2-1.el7
[2026-03-17 14:32:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 14:33:31] cg-vwn446.simple-grid.lan
[2026-03-17 14:33:31] apptainer works
[2026-03-17 14:33:31] Set ATHENA_PROC_NUMBER=8
[2026-03-17 14:33:31] Set ATHENA_CORE_NUMBER=8
[2026-03-17 14:33:31] Starting ATLAS job with PandaID=7056914887
[2026-03-17 14:33:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 01:46:43]  *** The last 200 lines of the pilot log: ***
[2026-03-18 01:46:43] 2026-03-18 00:45:34,235 | INFO     | job 7056914887 has finished - writing final server update
[2026-03-18 01:46:43] 2026-03-18 00:45:34,235 | INFO     | total number of processed events: 400 (read)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,238 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7056914887/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,238 | INFO     | extracted standard info from prmon json
[2026-03-18 01:46:43] 2026-03-18 00:45:34,239 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 01:46:43] 2026-03-18 00:45:34,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 01:46:43] 2026-03-18 00:45:34,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 01:46:43] 2026-03-18 00:45:34,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 01:46:43] 2026-03-18 00:45:34,261 | INFO     | fitting pss+swap vs Time
[2026-03-18 01:46:43] 2026-03-18 00:45:34,262 | INFO     | sum of square deviations: 85944915623.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,282 | INFO     | sum of deviations: 284211162912.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,282 | INFO     | mean x: 1773774815.5
[2026-03-18 01:46:43] 2026-03-18 00:45:34,283 | INFO     | mean y: 2505037.2055214723
[2026-03-18 01:46:43] 2026-03-18 00:45:34,283 | INFO     | intersect: -5863189278.775193
[2026-03-18 01:46:43] 2026-03-18 00:45:34,284 | INFO     | chi2: 5.3247629934692196
[2026-03-18 01:46:43] 2026-03-18 00:45:34,285 | INFO     | sum of square deviations: 83982776508.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,312 | INFO     | sum of deviations: 325253341939.00006
[2026-03-18 01:46:43] 2026-03-18 00:45:34,313 | INFO     | mean x: 1773774663.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,313 | INFO     | mean y: 2508205.851622875
[2026-03-18 01:46:43] 2026-03-18 00:45:34,313 | INFO     | intersect: -6867068640.449917
[2026-03-18 01:46:43] 2026-03-18 00:45:34,318 | INFO     | chi2: 4.564441923349024
[2026-03-18 01:46:43] 2026-03-18 00:45:34,319 | INFO     | current chi2=4.564441923349024 (change=14.278965487341372 %)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,319 | INFO     | right removable region: 646
[2026-03-18 01:46:43] 2026-03-18 00:45:34,320 | INFO     | sum of square deviations: 83982776508.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,334 | INFO     | sum of deviations: 62087117173.00001
[2026-03-18 01:46:43] 2026-03-18 00:45:34,334 | INFO     | mean x: 1773774968.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,334 | INFO     | mean y: 2522292.635239567
[2026-03-18 01:46:43] 2026-03-18 00:45:34,334 | INFO     | intersect: -1308801038.8368955
[2026-03-18 01:46:43] 2026-03-18 00:45:34,335 | INFO     | chi2: 1.1947721567438474
[2026-03-18 01:46:43] 2026-03-18 00:45:34,340 | INFO     | current chi2=1.1947721567438474 (change=77.56196551453603 %)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,341 | INFO     | sum of square deviations: 82050730980.5
[2026-03-18 01:46:43] 2026-03-18 00:45:34,354 | INFO     | sum of deviations: 14899145293.499924
[2026-03-18 01:46:43] 2026-03-18 00:45:34,354 | INFO     | mean x: 1773775120.5
[2026-03-18 01:46:43] 2026-03-18 00:45:34,355 | INFO     | mean y: 2526004.559190031
[2026-03-18 01:46:43] 2026-03-18 00:45:34,355 | INFO     | intersect: -319564157.4968384
[2026-03-18 01:46:43] 2026-03-18 00:45:34,356 | INFO     | chi2: 0.8901087588941934
[2026-03-18 01:46:43] 2026-03-18 00:45:34,356 | INFO     | current chi2=0.8901087588941934 (change=25.49970687967515 %)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,357 | INFO     | sum of square deviations: 80148546478.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,378 | INFO     | sum of deviations: 4915690489.999992
[2026-03-18 01:46:43] 2026-03-18 00:45:34,379 | INFO     | mean x: 1773775273.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,379 | INFO     | mean y: 2526804.8775510206
[2026-03-18 01:46:43] 2026-03-18 00:45:34,379 | INFO     | intersect: -106262819.1897627
[2026-03-18 01:46:43] 2026-03-18 00:45:34,380 | INFO     | chi2: 0.8829704874329158
[2026-03-18 01:46:43] 2026-03-18 00:45:34,380 | INFO     | current chi2=0.8829704874329158 (change=0.8019549734737603 %)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,380 | INFO     | left removable region: 30
[2026-03-18 01:46:43] 2026-03-18 00:45:34,381 | INFO     | sum of square deviations: 72480205490.0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,398 | INFO     | sum of deviations: 87198244864.00002
[2026-03-18 01:46:43] 2026-03-18 00:45:34,398 | INFO     | mean x: 1773775547.5
[2026-03-18 01:46:43] 2026-03-18 00:45:34,398 | INFO     | mean y: 2526767.022727273
[2026-03-18 01:46:43] 2026-03-18 00:45:34,398 | INFO     | intersect: -2131436754.1764548
[2026-03-18 01:46:43] 2026-03-18 00:45:34,399 | INFO     | chi2: 0.007177774283227051
[2026-03-18 01:46:43] 2026-03-18 00:45:34,400 | INFO     | current memory leak: 1.20 B/s (using 616 data points, chi2=0.01)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | could have reported an average CPU frequency of 1999 MHz (26 samples)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | ..............................
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | . Timing measurements:
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | . get job = 0 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | . initial setup = 106 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | . payload setup = 129 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | . stage-in = 0 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,401 | INFO     | . payload execution = 39887 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,402 | INFO     | . stage-out = 4 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,402 | INFO     | . log creation = 1 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,402 | INFO     | ..............................
[2026-03-18 01:46:43] 2026-03-18 00:45:34,551 | INFO     | 
[2026-03-18 01:46:43] 2026-03-18 00:45:34,552 | INFO     | job summary report
[2026-03-18 01:46:43] 2026-03-18 00:45:34,552 | INFO     | --------------------------------------------------
[2026-03-18 01:46:43] 2026-03-18 00:45:34,552 | INFO     | PanDA job id: 7056914887
[2026-03-18 01:46:43] 2026-03-18 00:45:34,552 | INFO     | task id: 49177127
[2026-03-18 01:46:43] 2026-03-18 00:45:34,552 | INFO     | errors: (none)
[2026-03-18 01:46:43] 2026-03-18 00:45:34,552 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 01:46:43] 2026-03-18 00:45:34,552 | INFO     | pilot state: finished 
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | transexitcode: 0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | exeerrorcode: 0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | exeerrordiag: 
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | exitcode: 0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | exitmsg: OK
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | cpuconsumptiontime: 158324 s
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | nevents: 400
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | neventsw: 0
[2026-03-18 01:46:43] 2026-03-18 00:45:34,553 | INFO     | pid: 21817
[2026-03-18 01:46:43] 2026-03-18 00:45:34,554 | INFO     | pgrp: 21817
[2026-03-18 01:46:43] 2026-03-18 00:45:34,554 | INFO     | corecount: 8
[2026-03-18 01:46:43] 2026-03-18 00:45:34,554 | INFO     | event service: False
[2026-03-18 01:46:43] 2026-03-18 00:45:34,554 | INFO     | sizes: {0: 2279201, 1: 2280259, 2: 2280347, 40021: 2322653, 40026: 2331651, 40028: 2331707, 40029: 2332029}
[2026-03-18 01:46:43] 2026-03-18 00:45:34,554 | INFO     | --------------------------------------------------
[2026-03-18 01:46:43] 2026-03-18 00:45:34,554 | INFO     | 
[2026-03-18 01:46:43] 2026-03-18 00:45:34,554 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-18 01:46:43] 2026-03-18 00:45:34,860 | INFO     | time since job start (40031s) is within the limit (345600.0s)
[2026-03-18 01:46:43] 2026-03-18 00:45:35,271 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,271 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,271 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,273 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 01:46:43] 2026-03-18 00:45:35,274 | INFO     | job 7056914887 has completed (purged errors)
[2026-03-18 01:46:43] 2026-03-18 00:45:35,274 | INFO     | overall cleanup function is called
[2026-03-18 01:46:43] 2026-03-18 00:45:36,282 | INFO     | --- collectZombieJob: --- 10, [21817]
[2026-03-18 01:46:43] 2026-03-18 00:45:36,283 | INFO     | zombie collector waiting for pid 21817
[2026-03-18 01:46:43] 2026-03-18 00:45:36,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 01:46:43] 2026-03-18 00:45:36,283 | INFO     | collected zombie processes
[2026-03-18 01:46:43] 2026-03-18 00:45:36,283 | INFO     | will attempt to kill all subprocesses of pid=21817
[2026-03-18 01:46:43] 2026-03-18 00:45:36,438 | INFO     | process IDs to be killed: [21817] (in reverse order)
[2026-03-18 01:46:43] 2026-03-18 00:45:37,539 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 01:46:43] 2026-03-18 00:45:37,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 01:46:43] 2026-03-18 00:45:37,543 | INFO     | did not find any defunct processes belonging to 21817
[2026-03-18 01:46:43] 2026-03-18 00:45:37,546 | INFO     | did not find any defunct processes belonging to 21817
[2026-03-18 01:46:43] 2026-03-18 00:45:37,546 | INFO     | ready for new job
[2026-03-18 01:46:43] 2026-03-18 00:45:37,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 01:46:43] 2026-03-18 00:45:37,550 | INFO     | **************************************
[2026-03-18 01:46:43] 2026-03-18 00:45:37,550 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 01:46:43] 2026-03-18 00:45:37,550 | INFO     | **************************************
[2026-03-18 01:46:43] 2026-03-18 00:45:37,550 | INFO     | 
[2026-03-18 01:46:43] 2026-03-18 00:45:37,551 | INFO     | pilot is running in a VM
[2026-03-18 01:46:43] 2026-03-18 00:45:37,551 | INFO     | architecture information:
[2026-03-18 01:46:43] 2026-03-18 00:45:37,557 | INFO     | executing command: cat /etc/os-release
[2026-03-18 01:46:43] 2026-03-18 00:45:37,801 | INFO     | cat /etc/os-release:
[2026-03-18 01:46:43] NAME="CentOS Linux"
[2026-03-18 01:46:43] VERSION="7 (Core)"
[2026-03-18 01:46:43] ID="centos"
[2026-03-18 01:46:43] ID_LIKE="rhel fedora"
[2026-03-18 01:46:43] VERSION_ID="7"
[2026-03-18 01:46:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 01:46:43] ANSI_COLOR="0;31"
[2026-03-18 01:46:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 01:46:43] HOME_URL="https://www.centos.org/"
[2026-03-18 01:46:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 01:46:43] 
[2026-03-18 01:46:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 01:46:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 01:46:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 01:46:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 01:46:43] 
[2026-03-18 01:46:43] 2026-03-18 00:45:37,801 | INFO     | **************************************
[2026-03-18 01:46:43] 2026-03-18 00:45:38,305 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-18 01:46:43] 2026-03-18 00:45:38,529 | INFO     | sufficient remaining disk space (495512977408 B)
[2026-03-18 01:46:43] 2026-03-18 00:45:38,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 01:46:43] 2026-03-18 00:45:38,530 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 01:46:43] 2026-03-18 00:45:38,530 | INFO     | update_server=False
[2026-03-18 01:46:43] 2026-03-18 00:45:38,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 01:46:43] 2026-03-18 00:45:38,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 01:46:43] 2026-03-18 00:45:38,536 | INFO     | aborting loop
[2026-03-18 01:46:43] 2026-03-18 00:45:38,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 01:46:43] 2026-03-18 00:45:38,584 | INFO     | all payload control threads have been joined
[2026-03-18 01:46:43] 2026-03-18 00:45:38,779 | INFO     | all job control threads have been joined
[2026-03-18 01:46:43] 2026-03-18 00:45:38,780 | INFO     | all data control threads have been joined
[2026-03-18 01:46:43] 2026-03-18 00:45:39,536 | INFO     | [job] retrieve thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:39,542 | INFO     | [job] job monitor thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:39,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 01:46:43] 2026-03-18 00:45:39,591 | INFO     | [payload] control thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:39,786 | INFO     | [job] control thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:39,787 | INFO     | [data] control thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:39,900 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:39,913 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,010 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,043 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 01:46:43] 2026-03-18 00:45:40,383 | INFO     | [data] copytool_in thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,440 | INFO     | [payload] failed_post thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,543 | INFO     | [data] copytool_out thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,557 | INFO     | [job] queue monitor thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,650 | INFO     | [job] validate thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:40,867 | INFO     | [payload] validate_post thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:45:44,258 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 01:46:43] 2026-03-18 00:46:08,044 | INFO     | PID=17341 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 01:46:43] 2026-03-18 00:46:08,044 | INFO     | .. there are 9 such processes running
[2026-03-18 01:46:43] 2026-03-18 00:46:08,044 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 01:46:43] 2026-03-18 00:46:08,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 01:46:43] 2026-03-18 00:46:08,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 01:46:43] 2026-03-18 00:46:32,102 | INFO     | [monitor] cgroup control has ended
[2026-03-18 01:46:43] 2026-03-18 00:46:33,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140446641522496)>', '<ExcThread(monitor, started 140446202312448)>']
[2026-03-18 01:46:43] 2026-03-18 00:46:33,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 01:46:43] 2026-03-18 00:46:33,194 | INFO     | [monitor] control thread has ended
[2026-03-18 01:46:43] 2026-03-18 00:46:38,059 | INFO     | all workflow threads have been joined
[2026-03-18 01:46:43] 2026-03-18 00:46:38,059 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 01:46:43] 2026-03-18 00:46:38,059 | INFO     | traces error code: 0
[2026-03-18 01:46:43] 2026-03-18 00:46:38,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 01:46:43] 2026-03-18 00:46:38,467 [wrapper] ==== pilot stdout END ====
[2026-03-18 01:46:43] 2026-03-18 00:46:38,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 01:46:43] 2026-03-18 00:46:38,670 [wrapper] pilotpid: 17341
[2026-03-18 01:46:43] 2026-03-18 00:46:38,768 [wrapper] Pilot exit status: 0
[2026-03-18 01:46:43] 2026-03-18 00:46:39,250 [wrapper] pandaids: 7056914887
[2026-03-18 01:46:43] 2026-03-18 00:46:40,368 [wrapper] cleanup supervisor_pilot 18485 17342
[2026-03-18 01:46:43] 2026-03-18 00:46:40,410 [wrapper] Test setup, not cleaning
[2026-03-18 01:46:43] 2026-03-18 00:46:40,449 [wrapper] apfmon messages muted
[2026-03-18 01:46:43] 2026-03-18 00:46:40,487 [wrapper] ==== wrapper stdout END ====
[2026-03-18 01:46:43] 2026-03-18 00:46:40,568 [wrapper] ==== wrapper stderr END ====
[2026-03-18 01:46:43]  *** Error codes and diagnostics ***
[2026-03-18 01:46:43]     "exeErrorCode": 0,
[2026-03-18 01:46:43]     "exeErrorDiag": "",
[2026-03-18 01:46:43]     "pilotErrorCode": 0,
[2026-03-18 01:46:43]     "pilotErrorDiag": "",
[2026-03-18 01:46:43]  *** Listing of results directory ***
[2026-03-18 01:46:43] total 494056
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 01:46:43] -rwx------. 1 boinc boinc     36322 Mar 16 14:34 runpilot2-wrapper.sh
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc       100 Mar 17 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 01:46:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 14:32 run_atlas
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc       105 Mar 17 14:32 job.xml
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc      6392 Mar 17 14:32 init_data.xml
[2026-03-18 01:46:43] -rw-r--r--. 2 boinc boinc 241263746 Mar 17 14:32 EVNT.49136573._000012.pool.root.1
[2026-03-18 01:46:43] -rw-r--r--. 2 boinc boinc     15845 Mar 17 14:32 start_atlas.sh
[2026-03-18 01:46:43] drwxrwx--x. 2 boinc boinc        68 Mar 17 14:32 shared
[2026-03-18 01:46:43] -rw-r--r--. 2 boinc boinc    596133 Mar 17 14:32 input.tar.gz
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc         0 Mar 17 14:32 boinc_lockfile
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc      2605 Mar 17 14:33 pandaJob.out
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc      5111 Mar 17 14:36 queuedata.json
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc       415 Mar 17 14:38 workernode_map.json
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc   1006434 Mar 17 14:38 agis_schedconf.cvmfs.json
[2026-03-18 01:46:43] drwx------. 5 boinc boinc      4096 Mar 17 14:38 pilot3
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc 248123173 Mar 18 01:44 HITS.49177127._000287.pool.root.1
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc       532 Mar 18 01:44 boinc_task_state.xml
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc      1015 Mar 18 01:45 memory_monitor_summary.json
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc   1511579 Mar 18 01:45 agis_ddmendpoints.agis.ALL.json
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc    809784 Mar 18 01:45 log.49177127._000287.job.log.tgz.1
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc        95 Mar 18 01:45 pilot_heartbeat.json
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc      6313 Mar 18 01:45 heartbeat.json
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc      4880 Mar 18 01:46 pilotlog.txt
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc      8192 Mar 18 01:46 boinc_mmap_file
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc        29 Mar 18 01:46 wrapper_checkpoint.txt
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc   5494609 Mar 18 01:46 log.49177127._000287.job.log.1
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc       357 Mar 18 01:46 output.list
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc       620 Mar 18 01:46 runtime_log
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc   6318080 Mar 18 01:46 result.tar.gz
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc      8816 Mar 18 01:46 runtime_log.err
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc       658 Mar 18 01:46 kATKDmJGNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmx9tLDmqongwm.diag
[2026-03-18 01:46:43] -rw-r--r--. 1 boinc boinc     20734 Mar 18 01:46 stderr.txt
[2026-03-18 01:46:43] HITS file was successfully produced:
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc 248123173 Mar 18 01:44 shared/HITS.pool.root.1
[2026-03-18 01:46:43]  *** Contents of shared directory: ***
[2026-03-18 01:46:43] total 484692
[2026-03-18 01:46:43] -rw-r--r--. 2 boinc boinc 241263746 Mar 17 14:32 ATLAS.root_0
[2026-03-18 01:46:43] -rw-r--r--. 2 boinc boinc     15845 Mar 17 14:32 start_atlas.sh
[2026-03-18 01:46:43] -rw-r--r--. 2 boinc boinc    596133 Mar 17 14:32 input.tar.gz
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc 248123173 Mar 18 01:44 HITS.pool.root.1
[2026-03-18 01:46:43] -rw-------. 1 boinc boinc   6318080 Mar 18 01:46 result.tar.gz
01:46:45 (13237): run_atlas exited; CPU time 159003.380207
01:46:45 (13237): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN