Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:06 (568058): wrapper (7.7.26015): starting
16:18:06 (568058): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 16:18:06] Arguments: --nthreads 4
[2026-03-18 16:18:06] Threads: 4
[2026-03-18 16:18:06] Checking for CVMFS
[2026-03-18 16:18:06] No cvmfs_config command found, will try listing directly
[2026-03-18 16:18:06] CVMFS is ok
[2026-03-18 16:18:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 16:18:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 16:18:06] Further information can be found at the LHC@home message board.
[2026-03-18 16:18:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 16:18:06] Checking for apptainer binary...
[2026-03-18 16:18:06] which: no apptainer in ((null))
[2026-03-18 16:18:06] apptainer is not installed, using version from CVMFS
[2026-03-18 16:18:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 16:18:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot208/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-18 16:18:06] apptainer works
[2026-03-18 16:18:06] Set ATHENA_PROC_NUMBER=4
[2026-03-18 16:18:06] Set ATHENA_CORE_NUMBER=4
[2026-03-18 16:18:06] Starting ATLAS job with PandaID=7056930894
[2026-03-18 16:18:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot208/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 20:03:11]  *** The last 200 lines of the pilot log: ***
[2026-03-18 20:03:11] 2026-03-18 19:02:20,017 | INFO     | using path: /var/lib/boinc/var/slot208/slots/0/PanDA_Pilot-7056930894/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,022 | INFO     | extracted standard info from prmon json
[2026-03-18 20:03:11] 2026-03-18 19:02:20,022 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 20:03:11] 2026-03-18 19:02:20,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 20:03:11] 2026-03-18 19:02:20,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 20:03:11] 2026-03-18 19:02:20,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 20:03:11] 2026-03-18 19:02:20,025 | INFO     | fitting pss+swap vs Time
[2026-03-18 20:03:11] 2026-03-18 19:02:20,025 | INFO     | sum of square deviations: 3301699115.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,026 | INFO     | sum of deviations: 14919015952.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,026 | INFO     | mean x: 1773853841.5
[2026-03-18 20:03:11] 2026-03-18 19:02:20,026 | INFO     | mean y: 2311697.118181818
[2026-03-18 20:03:11] 2026-03-18 19:02:20,026 | INFO     | intersect: -8013001884.190689
[2026-03-18 20:03:11] 2026-03-18 19:02:20,026 | INFO     | chi2: 1.9277672319049592
[2026-03-18 20:03:11] 2026-03-18 19:02:20,027 | INFO     | sum of square deviations: 3081657780.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,027 | INFO     | sum of deviations: 28420347984.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,027 | INFO     | mean x: 1773853689.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,027 | INFO     | mean y: 2320875.758139535
[2026-03-18 20:03:11] 2026-03-18 19:02:20,028 | INFO     | intersect: -16356906109.556925
[2026-03-18 20:03:11] 2026-03-18 19:02:20,028 | INFO     | chi2: 1.103971821420793
[2026-03-18 20:03:11] 2026-03-18 19:02:20,028 | INFO     | current chi2=1.103971821420793 (change=42.73313690834538 %)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,028 | INFO     | sum of square deviations: 2871616632.5
[2026-03-18 20:03:11] 2026-03-18 19:02:20,029 | INFO     | sum of deviations: 27702724067.5
[2026-03-18 20:03:11] 2026-03-18 19:02:20,029 | INFO     | mean x: 1773853536.5
[2026-03-18 20:03:11] 2026-03-18 19:02:20,029 | INFO     | mean y: 2320354.6523809526
[2026-03-18 20:03:11] 2026-03-18 19:02:20,029 | INFO     | intersect: -17110191984.794983
[2026-03-18 20:03:11] 2026-03-18 19:02:20,033 | INFO     | chi2: 1.1042044451179958
[2026-03-18 20:03:11] 2026-03-18 19:02:20,033 | INFO     | current chi2=1.1042044451179958 (change=-0.021071524896659057 %)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,033 | INFO     | right removable region: 209
[2026-03-18 20:03:11] 2026-03-18 19:02:20,033 | INFO     | sum of square deviations: 3081657780.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,034 | INFO     | sum of deviations: -8265492192.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,034 | INFO     | mean x: 1773853994.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,034 | INFO     | mean y: 2327567.2930232557
[2026-03-18 20:03:11] 2026-03-18 19:02:20,034 | INFO     | intersect: 4760083743.955513
[2026-03-18 20:03:11] 2026-03-18 19:02:20,034 | INFO     | chi2: 0.8415020478251797
[2026-03-18 20:03:11] 2026-03-18 19:02:20,034 | INFO     | current chi2=0.8415020478251797 (change=56.348358147283484 %)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,034 | INFO     | sum of square deviations: 2871616632.5
[2026-03-18 20:03:11] 2026-03-18 19:02:20,035 | INFO     | sum of deviations: -9258014347.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,035 | INFO     | mean x: 1773854146.5
[2026-03-18 20:03:11] 2026-03-18 19:02:20,035 | INFO     | mean y: 2328286.057142857
[2026-03-18 20:03:11] 2026-03-18 19:02:20,035 | INFO     | intersect: 5721186072.267031
[2026-03-18 20:03:11] 2026-03-18 19:02:20,035 | INFO     | chi2: 0.8408250946879997
[2026-03-18 20:03:11] 2026-03-18 19:02:20,035 | INFO     | current chi2=0.8408250946879997 (change=0.08044580983843373 %)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,035 | INFO     | left removable region: 20
[2026-03-18 20:03:11] 2026-03-18 19:02:20,036 | INFO     | sum of square deviations: 2093397390.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,036 | INFO     | sum of deviations: 2051836381.9999998
[2026-03-18 20:03:11] 2026-03-18 19:02:20,036 | INFO     | mean x: 1773854116.0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,036 | INFO     | mean y: 2339867.4444444445
[2026-03-18 20:03:11] 2026-03-18 19:02:20,036 | INFO     | intersect: -1736297253.7039907
[2026-03-18 20:03:11] 2026-03-18 19:02:20,036 | INFO     | chi2: 0.00022847610349155072
[2026-03-18 20:03:11] 2026-03-18 19:02:20,036 | INFO     | current memory leak: 0.98 B/s (using 189 data points, chi2=0.00)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | could have reported an average CPU frequency of 3563 MHz (11 samples)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | ..............................
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . Timing measurements:
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . get job = 0 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . initial setup = 12 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . payload setup = 18 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . stage-in = 0 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . payload execution = 13382 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . stage-out = 1 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | . log creation = 0 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,037 | INFO     | ..............................
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | 
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | job summary report
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | --------------------------------------------------
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | PanDA job id: 7056930894
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | task id: 49177958
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | errors: (none)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | pilot state: finished 
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | transexitcode: 0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | exeerrorcode: 0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | exeerrordiag: 
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | exitcode: 0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | exitmsg: OK
[2026-03-18 20:03:11] 2026-03-18 19:02:20,312 | INFO     | cpuconsumptiontime: 51073 s
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | nevents: 400
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | neventsw: 0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | pid: 589008
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | pgrp: 589008
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | corecount: 4
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | event service: False
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | sizes: {0: 2242616, 1: 2280341, 11: 2280341, 13405: 2310662, 13406: 2319684, 13407: 2319740, 13408: 2320062}
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | --------------------------------------------------
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | 
[2026-03-18 20:03:11] 2026-03-18 19:02:20,313 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot208/slots/0
[2026-03-18 20:03:11] 2026-03-18 19:02:20,352 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,352 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | job 7056930894 has completed (purged errors)
[2026-03-18 20:03:11] 2026-03-18 19:02:20,353 | INFO     | overall cleanup function is called
[2026-03-18 20:03:11] 2026-03-18 19:02:21,361 | INFO     | --- collectZombieJob: --- 10, [589008]
[2026-03-18 20:03:11] 2026-03-18 19:02:21,361 | INFO     | zombie collector waiting for pid 589008
[2026-03-18 20:03:11] 2026-03-18 19:02:21,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 20:03:11] 2026-03-18 19:02:21,361 | INFO     | collected zombie processes
[2026-03-18 20:03:11] 2026-03-18 19:02:21,361 | INFO     | will attempt to kill all subprocesses of pid=589008
[2026-03-18 20:03:11] 2026-03-18 19:02:21,984 | INFO     | PID=577018 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 20:03:11] 2026-03-18 19:02:21,984 | INFO     | .. there are 48 such processes running
[2026-03-18 20:03:11] 2026-03-18 19:02:22,346 | INFO     | process IDs to be killed: [589008] (in reverse order)
[2026-03-18 20:03:11] 2026-03-18 19:02:22,934 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 20:03:11] 2026-03-18 19:02:22,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 20:03:11] 2026-03-18 19:02:22,964 | INFO     | did not find any defunct processes belonging to 589008
[2026-03-18 20:03:11] 2026-03-18 19:02:22,994 | INFO     | did not find any defunct processes belonging to 589008
[2026-03-18 20:03:11] 2026-03-18 19:02:22,994 | INFO     | ready for new job
[2026-03-18 20:03:11] 2026-03-18 19:02:22,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 20:03:11] 2026-03-18 19:02:22,995 | INFO     | **************************************
[2026-03-18 20:03:11] 2026-03-18 19:02:22,996 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 20:03:11] 2026-03-18 19:02:22,996 | INFO     | **************************************
[2026-03-18 20:03:11] 2026-03-18 19:02:22,996 | INFO     | 
[2026-03-18 20:03:11] 2026-03-18 19:02:23,001 | INFO     | architecture information:
[2026-03-18 20:03:11] 2026-03-18 19:02:23,001 | INFO     | executing command: cat /etc/os-release
[2026-03-18 20:03:11] 2026-03-18 19:02:23,044 | INFO     | cat /etc/os-release:
[2026-03-18 20:03:11] NAME="CentOS Linux"
[2026-03-18 20:03:11] VERSION="7 (Core)"
[2026-03-18 20:03:11] ID="centos"
[2026-03-18 20:03:11] ID_LIKE="rhel fedora"
[2026-03-18 20:03:11] VERSION_ID="7"
[2026-03-18 20:03:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 20:03:11] ANSI_COLOR="0;31"
[2026-03-18 20:03:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 20:03:11] HOME_URL="https://www.centos.org/"
[2026-03-18 20:03:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 20:03:11] 
[2026-03-18 20:03:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 20:03:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 20:03:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 20:03:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 20:03:11] 
[2026-03-18 20:03:11] 2026-03-18 19:02:23,044 | INFO     | **************************************
[2026-03-18 20:03:11] 2026-03-18 19:02:23,547 | INFO     | executing command: df -mP /var/lib/boinc/var/slot208/slots/0
[2026-03-18 20:03:11] 2026-03-18 19:02:23,562 | INFO     | sufficient remaining disk space (23077060608 B)
[2026-03-18 20:03:11] 2026-03-18 19:02:23,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 20:03:11] 2026-03-18 19:02:23,562 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 20:03:11] 2026-03-18 19:02:23,562 | INFO     | update_server=False
[2026-03-18 20:03:11] 2026-03-18 19:02:23,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 20:03:11] 2026-03-18 19:02:23,679 | INFO     | all job control threads have been joined
[2026-03-18 20:03:11] 2026-03-18 19:02:23,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 20:03:11] 2026-03-18 19:02:23,967 | INFO     | all data control threads have been joined
[2026-03-18 20:03:11] 2026-03-18 19:02:24,013 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 20:03:11] 2026-03-18 19:02:24,013 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 20:03:11] 2026-03-18 19:02:24,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 20:03:11] 2026-03-18 19:02:24,013 | INFO     | will abort loop
[2026-03-18 20:03:11] 2026-03-18 19:02:24,567 | INFO     | [job] retrieve thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:24,684 | INFO     | [job] control thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:24,739 | INFO     | all payload control threads have been joined
[2026-03-18 20:03:11] 2026-03-18 19:02:24,964 | INFO     | [payload] failed_post thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:24,972 | INFO     | [data] control thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,018 | INFO     | [job] job monitor thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,095 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 20:03:11] 2026-03-18 19:02:25,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 20:03:11] 2026-03-18 19:02:25,164 | INFO     | [data] copytool_in thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,412 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,598 | INFO     | [job] validate thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,697 | INFO     | [data] copytool_out thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,744 | INFO     | [payload] control thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,817 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:25,976 | INFO     | [payload] validate_post thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:26,025 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:26,123 | INFO     | [job] queue monitor thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:29,124 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 20:03:11] 2026-03-18 19:02:54,908 | INFO     | PID=577018 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 20:03:11] 2026-03-18 19:02:54,911 | INFO     | .. there are 48 such processes running
[2026-03-18 20:03:11] 2026-03-18 19:02:54,912 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 20:03:11] 2026-03-18 19:02:54,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 20:03:11] 2026-03-18 19:02:54,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 20:03:11] 2026-03-18 19:03:03,235 | INFO     | [monitor] cgroup control has ended
[2026-03-18 20:03:11] 2026-03-18 19:03:05,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22526939424576)>', '<ExcThread(monitor, started 22526633703168)>']
[2026-03-18 20:03:11] 2026-03-18 19:03:05,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 20:03:11] 2026-03-18 19:03:05,966 | INFO     | [monitor] control thread has ended
[2026-03-18 20:03:11] 2026-03-18 19:03:10,343 | INFO     | all workflow threads have been joined
[2026-03-18 20:03:11] 2026-03-18 19:03:10,343 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 20:03:11] 2026-03-18 19:03:10,343 | INFO     | traces error code: 0
[2026-03-18 20:03:11] 2026-03-18 19:03:10,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 20:03:11] 2026-03-18 19:03:10,601 [wrapper] ==== pilot stdout END ====
[2026-03-18 20:03:11] 2026-03-18 19:03:10,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 20:03:11] 2026-03-18 19:03:10,634 [wrapper] pilotpid: 577018
[2026-03-18 20:03:11] 2026-03-18 19:03:10,663 [wrapper] Pilot exit status: 0
[2026-03-18 20:03:11] 2026-03-18 19:03:10,767 [wrapper] pandaids: 7056930894
[2026-03-18 20:03:11] 2026-03-18 19:03:10,941 [wrapper] cleanup supervisor_pilot 1729829 577019
[2026-03-18 20:03:11] 2026-03-18 19:03:10,955 [wrapper] Test setup, not cleaning
[2026-03-18 20:03:11] 2026-03-18 19:03:10,968 [wrapper] apfmon messages muted
[2026-03-18 20:03:11] 2026-03-18 19:03:10,979 [wrapper] ==== wrapper stdout END ====
[2026-03-18 20:03:11] 2026-03-18 19:03:10,987 [wrapper] ==== wrapper stderr END ====
[2026-03-18 20:03:11]  *** Error codes and diagnostics ***
[2026-03-18 20:03:11]     "exeErrorCode": 0,
[2026-03-18 20:03:11]     "exeErrorDiag": "",
[2026-03-18 20:03:11]     "pilotErrorCode": 0,
[2026-03-18 20:03:11]     "pilotErrorDiag": "",
[2026-03-18 20:03:11]  *** Listing of results directory ***
[2026-03-18 20:03:11] total 470512
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 20:03:11] -rwx------. 1 boinc boinc     36322 Mar 16 14:32 runpilot2-wrapper.sh
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc       100 Mar 18 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 20:03:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 16:18 run_atlas
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc       105 Mar 18 16:18 job.xml
[2026-03-18 20:03:11] -rw-r--r--. 2 boinc boinc     15845 Mar 18 16:18 start_atlas.sh
[2026-03-18 20:03:11] drwxrwx--x. 2 boinc boinc      4096 Mar 18 16:18 shared
[2026-03-18 20:03:11] -rw-r--r--. 2 boinc boinc    596134 Mar 18 16:18 input.tar.gz
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc      6708 Mar 18 16:18 init_data.xml
[2026-03-18 20:03:11] -rw-r--r--. 2 boinc boinc 240253083 Mar 18 16:18 EVNT.49127744._000002.pool.root.1
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc         0 Mar 18 16:18 boinc_lockfile
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc      2614 Mar 18 16:18 pandaJob.out
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc      5111 Mar 18 16:18 queuedata.json
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc   1011294 Mar 18 16:18 agis_schedconf.cvmfs.json
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc       444 Mar 18 16:18 workernode_map.json
[2026-03-18 20:03:11] drwx------. 5 boinc boinc      4096 Mar 18 16:18 pilot3
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc 233051749 Mar 18 20:01 HITS.49177958._000049.pool.root.1
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc       530 Mar 18 20:01 boinc_task_state.xml
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc      1045 Mar 18 20:02 memory_monitor_summary.json
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc   1511579 Mar 18 20:02 agis_ddmendpoints.agis.ALL.json
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc    406358 Mar 18 20:02 log.49177958._000049.job.log.tgz.1
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc      6352 Mar 18 20:02 heartbeat.json
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc        27 Mar 18 20:02 wrapper_checkpoint.txt
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc      8192 Mar 18 20:02 boinc_mmap_file
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc        95 Mar 18 20:02 pilot_heartbeat.json
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc      5015 Mar 18 20:03 pilotlog.txt
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc   1874607 Mar 18 20:03 log.49177958._000049.job.log.1
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc       357 Mar 18 20:03 output.list
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc       620 Mar 18 20:03 runtime_log
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc   2293760 Mar 18 20:03 result.tar.gz
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc      9222 Mar 18 20:03 runtime_log.err
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc       665 Mar 18 20:03 JgvLDmvENM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5ExLDm3E0Ikn.diag
[2026-03-18 20:03:11] -rw-r--r--. 1 boinc boinc     20939 Mar 18 20:03 stderr.txt
[2026-03-18 20:03:11] HITS file was successfully produced:
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc 233051749 Mar 18 20:01 shared/HITS.pool.root.1
[2026-03-18 20:03:11]  *** Contents of shared directory: ***
[2026-03-18 20:03:11] total 465064
[2026-03-18 20:03:11] -rw-r--r--. 2 boinc boinc     15845 Mar 18 16:18 start_atlas.sh
[2026-03-18 20:03:11] -rw-r--r--. 2 boinc boinc    596134 Mar 18 16:18 input.tar.gz
[2026-03-18 20:03:11] -rw-r--r--. 2 boinc boinc 240253083 Mar 18 16:18 ATLAS.root_0
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc 233051749 Mar 18 20:01 HITS.pool.root.1
[2026-03-18 20:03:11] -rw-------. 1 boinc boinc   2293760 Mar 18 20:03 result.tar.gz
20:03:12 (568058): run_atlas exited; CPU time 51722.908250
20:03:12 (568058): called boinc_finish(0)

</stderr_txt>
]]>

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