Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:22:22 (1923351): wrapper (7.7.26015): starting
08:22:22 (1923351): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 08:22:22] Arguments: --nthreads 12
[2026-03-16 08:22:22] Threads: 12
[2026-03-16 08:22:22] Checking for CVMFS
[2026-03-16 08:22:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 08:22:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 08:22:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 08:22:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 08:22:23] 2.11.5.0 1269751 87293 283028 157351 2 1194 35592488 45568001 17757 130560 0 854575448 99.838 428666589 23420 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-16 08:22:23] CVMFS is ok
[2026-03-16 08:22:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 08:22:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 08:22:23] Further information can be found at the LHC@home message board.
[2026-03-16 08:22:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 08:22:23] Checking for apptainer binary...
[2026-03-16 08:22:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 08:22:23] Running /usr/bin/apptainer --version
[2026-03-16 08:22:23] apptainer version 1.4.1-1.el9
[2026-03-16 08:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 08:22:23] wns0072.triumf.lcg
[2026-03-16 08:22:23] apptainer works
[2026-03-16 08:22:23] Set ATHENA_PROC_NUMBER=12
[2026-03-16 08:22:23] Set ATHENA_CORE_NUMBER=12
[2026-03-16 08:22:23] Starting ATLAS job with PandaID=7056916091
[2026-03-16 08:22:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 08:26:04]  *** The last 200 lines of the pilot log: ***
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | found no stored workdir sizes
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | INFO     | will not add max space = 0 B to job metrics
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | WARNING  | wrong length of table data, x=[1773674590.0], y=[1085.0] (must be same and length>=4)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | could have reported an average CPU frequency of 2729 MHz (4 samples)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | ..............................
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . Timing measurements:
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . get job = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . initial setup = 8 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . payload setup = 6 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . stage-in = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . payload execution = 26 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . stage-out = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . log creation = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | ..............................
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 08:26:04] 2026-03-16 15:25:30,639 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056916091/pilotlog.txt
[2026-03-16 08:26:04] 2026-03-16 15:25:30,658 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-16 08:26:04] - Log from pilotlog.txt -
[2026-03-16 08:26:04] 2026-03-16 15:25:30,636 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | found no stored workdir sizes
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | INFO     | will not add max space = 0 B to job metrics
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | WARNING  | wrong length of table data, x=[1773674590.0], y=[1085.0] (must be same and length>=4)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | could have reported an average CPU frequency of 2729 MHz (4 samples)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | ..............................
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . Timing measurements:
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . get job = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . initial setup = 8 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . payload setup = 6 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . stage-in = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . payload execution = 26 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . stage-out = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . log creation = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | ..............................
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 08:26:04] 2026-03-16 15:25:30,639 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056916091/pilotlog.txt
[2026-03-16 08:26:04] 2026-03-16 15:25:30,658 | WARNING  | 
[2026-03-16 08:26:04] [begin log extracts]
[2026-03-16 08:26:04] - Log from pilotlog.txt -
[2026-03-16 08:26:04] 2026-03-16 15:25:30,636 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | WARNING  | found no stored workdir sizes
[2026-03-16 08:26:04] 2026-03-16 15:25:30,637 | INFO     | will not add max space = 0 B to job metrics
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | WARNING  | wrong length of table data, x=[1773674590.0], y=[1085.0] (must be same and length>=4)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | could have reported an average CPU frequency of 2729 MHz (4 samples)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | ..............................
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . Timing measurements:
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . get job = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . initial setup = 8 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . payload setup = 6 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . stage-in = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . payload execution = 26 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . stage-out = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | . log creation = 0 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | ..............................
[2026-03-16 08:26:04] 2026-03-16 15:25:30,638 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 08:26:04] 2026-03-16 15:25:30,639 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056916091/pilotlog.txt
[2026-03-16 08:26:04] [end log extracts]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,659 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,660 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-16 08:26:04] 2026-03-16 15:25:30,929 | INFO     | 
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | job summary report
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | --------------------------------------------------
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | PanDA job id: 7056916091
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | task id: 49177170
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-16 08:23:23,681 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | pilot state: failed 
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | transexitcode: 65
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | exeerrorcode: 65
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | exitcode: 65
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | cpuconsumptiontime: 13 s
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | nevents: 0
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | neventsw: 0
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | pid: 1931605
[2026-03-16 08:26:04] 2026-03-16 15:25:30,930 | INFO     | pgrp: 1931605
[2026-03-16 08:26:04] 2026-03-16 15:25:30,931 | INFO     | corecount: 12
[2026-03-16 08:26:04] 2026-03-16 15:25:30,931 | INFO     | event service: False
[2026-03-16 08:26:04] 2026-03-16 15:25:30,931 | INFO     | sizes: {0: 2280304, 11: 2280304, 36: 2303511, 38: 2307803, 40: 2307831, 156: 2307997}
[2026-03-16 08:26:04] 2026-03-16 15:25:30,931 | INFO     | --------------------------------------------------
[2026-03-16 08:26:04] 2026-03-16 15:25:30,931 | INFO     | 
[2026-03-16 08:26:04] 2026-03-16 15:25:30,931 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-16 08:26:04] 2026-03-16 15:25:30,948 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,950 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 08:26:04] 2026-03-16 15:25:30,950 | INFO     | job 7056916091 has completed (purged errors)
[2026-03-16 08:26:04] 2026-03-16 15:25:30,950 | INFO     | overall cleanup function is called
[2026-03-16 08:26:04] 2026-03-16 15:25:31,956 | INFO     | --- collectZombieJob: --- 10, [1931605]
[2026-03-16 08:26:04] 2026-03-16 15:25:31,956 | INFO     | zombie collector waiting for pid 1931605
[2026-03-16 08:26:04] 2026-03-16 15:25:31,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 08:26:04] 2026-03-16 15:25:31,957 | INFO     | collected zombie processes
[2026-03-16 08:26:04] 2026-03-16 15:25:31,957 | INFO     | will attempt to kill all subprocesses of pid=1931605
[2026-03-16 08:26:04] 2026-03-16 15:25:32,157 | INFO     | process IDs to be killed: [1931605] (in reverse order)
[2026-03-16 08:26:04] 2026-03-16 15:25:32,243 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 08:26:04] 2026-03-16 15:25:32,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 08:26:04] 2026-03-16 15:25:32,269 | INFO     | did not find any defunct processes belonging to 1931605
[2026-03-16 08:26:04] 2026-03-16 15:25:32,296 | INFO     | did not find any defunct processes belonging to 1931605
[2026-03-16 08:26:04] 2026-03-16 15:25:32,297 | INFO     | ready for new job
[2026-03-16 08:26:04] 2026-03-16 15:25:32,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 08:26:04] 2026-03-16 15:25:32,299 | INFO     | **************************************
[2026-03-16 08:26:04] 2026-03-16 15:25:32,299 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 08:26:04] 2026-03-16 15:25:32,299 | INFO     | **************************************
[2026-03-16 08:26:04] 2026-03-16 15:25:32,299 | INFO     | 
[2026-03-16 08:26:04] 2026-03-16 15:25:32,301 | INFO     | architecture information:
[2026-03-16 08:26:04] 2026-03-16 15:25:32,305 | INFO     | executing command: cat /etc/os-release
[2026-03-16 08:26:04] 2026-03-16 15:25:32,345 | INFO     | cat /etc/os-release:
[2026-03-16 08:26:04] NAME="CentOS Linux"
[2026-03-16 08:26:04] VERSION="7 (Core)"
[2026-03-16 08:26:04] ID="centos"
[2026-03-16 08:26:04] ID_LIKE="rhel fedora"
[2026-03-16 08:26:04] VERSION_ID="7"
[2026-03-16 08:26:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 08:26:04] ANSI_COLOR="0;31"
[2026-03-16 08:26:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 08:26:04] HOME_URL="https://www.centos.org/"
[2026-03-16 08:26:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 08:26:04] 
[2026-03-16 08:26:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 08:26:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 08:26:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 08:26:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 08:26:04] 
[2026-03-16 08:26:04] 2026-03-16 15:25:32,345 | INFO     | **************************************
[2026-03-16 08:26:04] 2026-03-16 15:25:32,847 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-16 08:26:04] 2026-03-16 15:25:32,868 | INFO     | sufficient remaining disk space (1999995142144 B)
[2026-03-16 08:26:04] 2026-03-16 15:25:32,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 08:26:04] 2026-03-16 15:25:32,868 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 08:26:04] 2026-03-16 15:25:32,868 | INFO     | update_server=False
[2026-03-16 08:26:04] 2026-03-16 15:25:32,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 08:26:04] 2026-03-16 15:25:32,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 08:26:04] 2026-03-16 15:25:32,870 | INFO     | aborting loop
[2026-03-16 08:26:04] 2026-03-16 15:25:33,044 | INFO     | all payload control threads have been joined
[2026-03-16 08:26:04] 2026-03-16 15:25:33,376 | INFO     | all data control threads have been joined
[2026-03-16 08:26:04] 2026-03-16 15:25:33,465 | INFO     | all job control threads have been joined
[2026-03-16 08:26:04] 2026-03-16 15:25:33,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 08:26:04] 2026-03-16 15:25:33,875 | INFO     | [job] job monitor thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:33,878 | INFO     | [job] retrieve thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,019 | INFO     | [data] copytool_in thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,049 | INFO     | [payload] control thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,051 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 08:26:04] 2026-03-16 15:25:34,250 | INFO     | [payload] failed_post thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,385 | INFO     | [data] control thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,470 | INFO     | [job] control thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,514 | INFO     | [payload] validate_post thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:34,999 | INFO     | [job] validate thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:35,233 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:35,264 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:35,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:35,528 | INFO     | [data] copytool_out thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:35,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 08:26:04] 2026-03-16 15:25:36,736 | INFO     | [job] queue monitor thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:38,213 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 08:26:04] 2026-03-16 15:25:43,610 | INFO     | [monitor] cgroup control has ended
[2026-03-16 08:26:04] 2026-03-16 15:25:44,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300139493184)>', '<ExcThread(monitor, started 140299818997504)>']
[2026-03-16 08:26:04] 2026-03-16 15:25:49,636 | INFO     | all workflow threads have been joined
[2026-03-16 08:26:04] 2026-03-16 15:25:49,636 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 08:26:04] 2026-03-16 15:25:49,636 | INFO     | traces error code: 0
[2026-03-16 08:26:04] 2026-03-16 15:25:49,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 08:26:04] 2026-03-16 15:26:03,972 | INFO     | PID=1927036 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 08:26:04] 2026-03-16 15:26:03,972 | INFO     | .. there are 26 such processes running
[2026-03-16 08:26:04] 2026-03-16 15:26:03,973 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 08:26:04] 2026-03-16 15:26:03,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 08:26:04] 2026-03-16 15:26:03,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 08:26:04] 2026-03-16 15:26:03,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 08:26:04] 2026-03-16 15:26:03,973 | CRITICAL | thread 'MainThread' is not alive
[2026-03-16 08:26:04] 2026-03-16 15:26:03,973 | INFO     | [monitor] control thread has ended
[2026-03-16 08:26:04] 2026-03-16 15:26:04,095 [wrapper] ==== pilot stdout END ====
[2026-03-16 08:26:04] 2026-03-16 15:26:04,105 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 08:26:04] 2026-03-16 15:26:04,151 [wrapper] pilotpid: 1927036
[2026-03-16 08:26:04] 2026-03-16 15:26:04,167 [wrapper] Pilot exit status: 0
[2026-03-16 08:26:04] 2026-03-16 15:26:04,224 [wrapper] pandaids: 7056916091
[2026-03-16 08:26:04] 2026-03-16 15:26:04,378 [wrapper] cleanup supervisor_pilot 1927042 1927037
[2026-03-16 08:26:04] 2026-03-16 15:26:04,381 [wrapper] Test setup, not cleaning
[2026-03-16 08:26:04] 2026-03-16 15:26:04,392 [wrapper] apfmon messages muted
[2026-03-16 08:26:04] 2026-03-16 15:26:04,395 [wrapper] ==== wrapper stdout END ====
[2026-03-16 08:26:04] 2026-03-16 15:26:04,397 [wrapper] ==== wrapper stderr END ====
[2026-03-16 08:26:04]  *** Error codes and diagnostics ***
[2026-03-16 08:26:04]     "exeErrorCode": 65,
[2026-03-16 08:26:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 08:26:04]     "pilotErrorCode": 1305,
[2026-03-16 08:26:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 08:26:04]  *** Listing of results directory ***
[2026-03-16 08:26:04] total 238008
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc    585013 Mar 16 06:19 pilot3.tar.gz
[2026-03-16 08:26:04] -rwx------. 1 boinc boinc     36322 Mar 16 06:32 runpilot2-wrapper.sh
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc      5111 Mar 16 06:46 queuedata.json
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc       100 Mar 16 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 08:26:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 08:22 run_atlas
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc       105 Mar 16 08:22 job.xml
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc      6594 Mar 16 08:22 init_data.xml
[2026-03-16 08:26:04] -rw-r--r--. 2 boinc boinc 239583182 Mar 16 08:22 EVNT.49136756._000002.pool.root.1
[2026-03-16 08:26:04] -rw-r--r--. 2 boinc boinc     15845 Mar 16 08:22 start_atlas.sh
[2026-03-16 08:26:04] drwxrwx--x. 2 boinc boinc      4096 Mar 16 08:22 shared
[2026-03-16 08:26:04] -rw-r--r--. 2 boinc boinc    596140 Mar 16 08:22 input.tar.gz
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc         0 Mar 16 08:22 boinc_lockfile
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc      2619 Mar 16 08:22 pandaJob.out
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc   1006429 Mar 16 08:22 agis_schedconf.cvmfs.json
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc   1511579 Mar 16 08:22 agis_ddmendpoints.agis.ALL.json
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc       444 Mar 16 08:22 workernode_map.json
[2026-03-16 08:26:04] drwx------. 5 boinc boinc      4096 Mar 16 08:22 pilot3
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc       523 Mar 16 08:23 boinc_task_state.xml
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc       960 Mar 16 08:23 memory_monitor_summary.json
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc     20834 Mar 16 08:23 log.49177170._000028.job.log.tgz.1
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc      7001 Mar 16 08:25 heartbeat.json
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc        22 Mar 16 08:26 wrapper_checkpoint.txt
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc       893 Mar 16 08:26 pilotlog.txt
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc        95 Mar 16 08:26 pilot_heartbeat.json
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc      8192 Mar 16 08:26 boinc_mmap_file
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc     82686 Mar 16 08:26 log.49177170._000028.job.log.1
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc       188 Mar 16 08:26 output.list
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc       620 Mar 16 08:26 runtime_log
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc    122880 Mar 16 08:26 result.tar.gz
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc       644 Mar 16 08:26 uH2NDmmENM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7DxLDmkRvfkm.diag
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc      8635 Mar 16 08:26 runtime_log.err
[2026-03-16 08:26:04] -rw-r--r--. 1 boinc boinc     21614 Mar 16 08:26 stderr.txt
[2026-03-16 08:26:04] No HITS result produced
[2026-03-16 08:26:04]  *** Contents of shared directory: ***
[2026-03-16 08:26:04] total 234692
[2026-03-16 08:26:04] -rw-r--r--. 2 boinc boinc 239583182 Mar 16 08:22 ATLAS.root_0
[2026-03-16 08:26:04] -rw-r--r--. 2 boinc boinc     15845 Mar 16 08:22 start_atlas.sh
[2026-03-16 08:26:04] -rw-r--r--. 2 boinc boinc    596140 Mar 16 08:22 input.tar.gz
[2026-03-16 08:26:04] -rw-------. 1 boinc boinc    122880 Mar 16 08:26 result.tar.gz
08:26:05 (1923351): run_atlas exited; CPU time 17.135746
08:26:05 (1923351): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN