Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:43:42 (3180073): wrapper (7.7.26015): starting
17:43:42 (3180073): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 17:43:42] Arguments: --nthreads 4
[2026-03-18 17:43:42] Threads: 4
[2026-03-18 17:43:42] Checking for CVMFS
[2026-03-18 17:43:42] No cvmfs_config command found, will try listing directly
[2026-03-18 17:43:42] CVMFS is ok
[2026-03-18 17:43:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 17:43:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 17:43:42] Further information can be found at the LHC@home message board.
[2026-03-18 17:43:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 17:43:42] Checking for apptainer binary...
[2026-03-18 17:43:42] which: no apptainer in ((null))
[2026-03-18 17:43:42] apptainer is not installed, using version from CVMFS
[2026-03-18 17:43:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 17:43:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-18 17:43:42] apptainer works
[2026-03-18 17:43:42] Set ATHENA_PROC_NUMBER=4
[2026-03-18 17:43:42] Set ATHENA_CORE_NUMBER=4
[2026-03-18 17:43:42] Starting ATLAS job with PandaID=7056911483
[2026-03-18 17:43:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 21:16:23]  *** The last 200 lines of the pilot log: ***
[2026-03-18 21:16:23] 2026-03-18 20:15:41,345 | INFO     | extracted standard info from prmon json
[2026-03-18 21:16:23] 2026-03-18 20:15:41,345 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 21:16:23] 2026-03-18 20:15:41,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 21:16:23] 2026-03-18 20:15:41,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 21:16:23] 2026-03-18 20:15:41,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 21:16:23] 2026-03-18 20:15:41,348 | INFO     | fitting pss+swap vs Time
[2026-03-18 21:16:23] 2026-03-18 20:15:41,348 | INFO     | sum of square deviations: 2790348132.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,349 | INFO     | sum of deviations: 23044373911.5
[2026-03-18 21:16:23] 2026-03-18 20:15:41,349 | INFO     | mean x: 1773858572.5
[2026-03-18 21:16:23] 2026-03-18 20:15:41,349 | INFO     | mean y: 2330472.8798076925
[2026-03-18 21:16:23] 2026-03-18 20:15:41,349 | INFO     | intersect: -14647261003.546629
[2026-03-18 21:16:23] 2026-03-18 20:15:41,349 | INFO     | chi2: 1.096741614968283
[2026-03-18 21:16:23] 2026-03-18 20:15:41,350 | INFO     | sum of square deviations: 2593916542.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,350 | INFO     | sum of deviations: 22418621667.999992
[2026-03-18 21:16:23] 2026-03-18 20:15:41,350 | INFO     | mean x: 1773858420.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,350 | INFO     | mean y: 2329986.9852216747
[2026-03-18 21:16:23] 2026-03-18 20:15:41,350 | INFO     | intersect: -15328718705.859047
[2026-03-18 21:16:23] 2026-03-18 20:15:41,351 | INFO     | chi2: 1.097185780842549
[2026-03-18 21:16:23] 2026-03-18 20:15:41,351 | INFO     | current chi2=1.097185780842549 (change=-0.04049867974407393 %)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,351 | INFO     | right removable region: 202
[2026-03-18 21:16:23] 2026-03-18 20:15:41,351 | INFO     | sum of square deviations: 2593916542.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,352 | INFO     | sum of deviations: 1521162856.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,352 | INFO     | mean x: 1773858725.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,352 | INFO     | mean y: 2346958.275862069
[2026-03-18 21:16:23] 2026-03-18 20:15:41,352 | INFO     | intersect: -1037905478.7516661
[2026-03-18 21:16:23] 2026-03-18 20:15:41,352 | INFO     | chi2: 0.0018539770591403425
[2026-03-18 21:16:23] 2026-03-18 20:15:41,352 | INFO     | current chi2=0.0018539770591403425 (change=99.83095589390997 %)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,352 | INFO     | sum of square deviations: 2406926989.5
[2026-03-18 21:16:23] 2026-03-18 20:15:41,353 | INFO     | sum of deviations: 768568584.9999999
[2026-03-18 21:16:23] 2026-03-18 20:15:41,353 | INFO     | mean x: 1773858877.5
[2026-03-18 21:16:23] 2026-03-18 20:15:41,353 | INFO     | mean y: 2347569.8484848486
[2026-03-18 21:16:23] 2026-03-18 20:15:41,354 | INFO     | intersect: -564072688.6044204
[2026-03-18 21:16:23] 2026-03-18 20:15:41,354 | INFO     | chi2: 0.0013752402111215807
[2026-03-18 21:16:23] 2026-03-18 20:15:41,354 | INFO     | current chi2=0.0013752402111215807 (change=25.82215597860439 %)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,354 | INFO     | sum of square deviations: 2229146912.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | sum of deviations: 466288758.00000024
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | mean x: 1773859030.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | mean y: 2347828.3316062177
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | intersect: -368704666.9136175
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | chi2: 0.001301641672833983
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | current chi2=0.001301641672833983 (change=5.351686032185912 %)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | left removable region: 30
[2026-03-18 21:16:23] 2026-03-18 20:15:41,355 | INFO     | sum of square deviations: 1577789583.0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | sum of deviations: 1678490090.9999998
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | mean x: 1773859304.5
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | mean y: 2346426.7558139535
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | intersect: -1884727298.100564
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | chi2: 0.00027980929752293874
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | current memory leak: 1.06 B/s (using 172 data points, chi2=0.00)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | could have reported an average CPU frequency of 3578 MHz (11 samples)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | ..............................
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | . Timing measurements:
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | . get job = 0 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | . initial setup = 5 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,356 | INFO     | . payload setup = 7 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,357 | INFO     | . stage-in = 0 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,357 | INFO     | . payload execution = 12682 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,357 | INFO     | . stage-out = 0 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,357 | INFO     | . log creation = 0 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,357 | INFO     | ..............................
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | 
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | job summary report
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | --------------------------------------------------
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | PanDA job id: 7056911483
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | task id: 49177032
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | errors: (none)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 21:16:23] 2026-03-18 20:15:41,824 | INFO     | pilot state: finished 
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | transexitcode: 0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | exeerrorcode: 0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | exeerrordiag: 
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | exitcode: 0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | exitmsg: OK
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | cpuconsumptiontime: 49341 s
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | nevents: 400
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | neventsw: 0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | pid: 3190590
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | pgrp: 3190590
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | corecount: 4
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | event service: False
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | sizes: {0: 2280327, 11: 2280327, 12693: 2310258, 12694: 2319474}
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | --------------------------------------------------
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | 
[2026-03-18 21:16:23] 2026-03-18 20:15:41,825 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-03-18 21:16:23] 2026-03-18 20:15:41,847 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | job 7056911483 has completed (purged errors)
[2026-03-18 21:16:23] 2026-03-18 20:15:41,848 | INFO     | overall cleanup function is called
[2026-03-18 21:16:23] 2026-03-18 20:15:42,855 | INFO     | --- collectZombieJob: --- 10, [3190590]
[2026-03-18 21:16:23] 2026-03-18 20:15:42,858 | INFO     | zombie collector waiting for pid 3190590
[2026-03-18 21:16:23] 2026-03-18 20:15:42,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 21:16:23] 2026-03-18 20:15:42,858 | INFO     | collected zombie processes
[2026-03-18 21:16:23] 2026-03-18 20:15:42,858 | INFO     | will attempt to kill all subprocesses of pid=3190590
[2026-03-18 21:16:23] 2026-03-18 20:15:43,329 | INFO     | process IDs to be killed: [3190590] (in reverse order)
[2026-03-18 21:16:23] 2026-03-18 20:15:43,578 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 21:16:23] 2026-03-18 20:15:43,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 21:16:23] 2026-03-18 20:15:43,610 | INFO     | did not find any defunct processes belonging to 3190590
[2026-03-18 21:16:23] 2026-03-18 20:15:43,639 | INFO     | did not find any defunct processes belonging to 3190590
[2026-03-18 21:16:23] 2026-03-18 20:15:43,640 | INFO     | ready for new job
[2026-03-18 21:16:23] 2026-03-18 20:15:43,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 21:16:23] 2026-03-18 20:15:43,641 | INFO     | **************************************
[2026-03-18 21:16:23] 2026-03-18 20:15:43,641 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 21:16:23] 2026-03-18 20:15:43,641 | INFO     | **************************************
[2026-03-18 21:16:23] 2026-03-18 20:15:43,641 | INFO     | 
[2026-03-18 21:16:23] 2026-03-18 20:15:43,648 | INFO     | architecture information:
[2026-03-18 21:16:23] 2026-03-18 20:15:43,648 | INFO     | executing command: cat /etc/os-release
[2026-03-18 21:16:23] 2026-03-18 20:15:43,665 | INFO     | cat /etc/os-release:
[2026-03-18 21:16:23] NAME="CentOS Linux"
[2026-03-18 21:16:23] VERSION="7 (Core)"
[2026-03-18 21:16:23] ID="centos"
[2026-03-18 21:16:23] ID_LIKE="rhel fedora"
[2026-03-18 21:16:23] VERSION_ID="7"
[2026-03-18 21:16:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 21:16:23] ANSI_COLOR="0;31"
[2026-03-18 21:16:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 21:16:23] HOME_URL="https://www.centos.org/"
[2026-03-18 21:16:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 21:16:23] 
[2026-03-18 21:16:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 21:16:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 21:16:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 21:16:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 21:16:23] 
[2026-03-18 21:16:23] 2026-03-18 20:15:43,665 | INFO     | **************************************
[2026-03-18 21:16:23] 2026-03-18 20:15:44,177 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-03-18 21:16:23] 2026-03-18 20:15:44,195 | INFO     | sufficient remaining disk space (18266193920 B)
[2026-03-18 21:16:23] 2026-03-18 20:15:44,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 21:16:23] 2026-03-18 20:15:44,195 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 21:16:23] 2026-03-18 20:15:44,195 | INFO     | update_server=False
[2026-03-18 21:16:23] 2026-03-18 20:15:44,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 21:16:23] 2026-03-18 20:15:44,236 | WARNING  | process 3190590 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 21:16:23] 2026-03-18 20:15:44,272 | INFO     | all job control threads have been joined
[2026-03-18 21:16:23] 2026-03-18 20:15:44,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 21:16:23] 2026-03-18 20:15:44,567 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:16:23] 2026-03-18 20:15:44,979 | INFO     | all data control threads have been joined
[2026-03-18 21:16:23] 2026-03-18 20:15:45,035 | INFO     | number of running child processes to parent process 3190590: 1
[2026-03-18 21:16:23] 2026-03-18 20:15:45,036 | INFO     | maximum number of monitored processes: 6
[2026-03-18 21:16:23] 2026-03-18 20:15:45,036 | INFO     | aborting job monitoring since job object (job id=7056911483) has expired
[2026-03-18 21:16:23] 2026-03-18 20:15:45,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:16:23] 2026-03-18 20:15:45,036 | INFO     | will abort loop
[2026-03-18 21:16:23] 2026-03-18 20:15:45,200 | INFO     | [job] retrieve thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:45,277 | INFO     | [job] control thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:45,587 | INFO     | [payload] failed_post thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:45,596 | INFO     | [job] validate thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:45,614 | INFO     | all payload control threads have been joined
[2026-03-18 21:16:23] 2026-03-18 20:15:45,909 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:45,958 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:45,984 | INFO     | [data] control thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:46,009 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:46,041 | INFO     | [job] job monitor thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:46,214 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:46,279 | INFO     | [data] copytool_out thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:46,310 | INFO     | [payload] validate_post thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:46,413 | INFO     | [data] copytool_in thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:46,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:16:23] 2026-03-18 20:15:46,619 | INFO     | [payload] control thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:47,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 21:16:23] 2026-03-18 20:15:47,426 | INFO     | [job] queue monitor thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:15:51,333 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 21:16:23] 2026-03-18 20:16:13,840 | INFO     | PID=3184617 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 21:16:23] 2026-03-18 20:16:13,840 | INFO     | .. there are 46 such processes running
[2026-03-18 21:16:23] 2026-03-18 20:16:13,841 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 21:16:23] 2026-03-18 20:16:13,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 21:16:23] 2026-03-18 20:16:13,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 21:16:23] 2026-03-18 20:16:16,876 | INFO     | [monitor] cgroup control has ended
[2026-03-18 21:16:23] 2026-03-18 20:16:18,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23047400224576)>', '<ExcThread(monitor, started 23047160735488)>']
[2026-03-18 21:16:23] 2026-03-18 20:16:18,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 21:16:23] 2026-03-18 20:16:18,867 | INFO     | [monitor] control thread has ended
[2026-03-18 21:16:23] 2026-03-18 20:16:23,056 | INFO     | all workflow threads have been joined
[2026-03-18 21:16:23] 2026-03-18 20:16:23,056 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 21:16:23] 2026-03-18 20:16:23,056 | INFO     | traces error code: 0
[2026-03-18 21:16:23] 2026-03-18 20:16:23,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 21:16:23] 2026-03-18 20:16:23,270 [wrapper] ==== pilot stdout END ====
[2026-03-18 21:16:23] 2026-03-18 20:16:23,272 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 21:16:23] 2026-03-18 20:16:23,273 [wrapper] pilotpid: 3184617
[2026-03-18 21:16:23] 2026-03-18 20:16:23,274 [wrapper] Pilot exit status: 0
[2026-03-18 21:16:23] 2026-03-18 20:16:23,281 [wrapper] pandaids: 7056911483
[2026-03-18 21:16:23] 2026-03-18 20:16:23,417 [wrapper] cleanup supervisor_pilot 4145750 3184618
[2026-03-18 21:16:23] 2026-03-18 20:16:23,420 [wrapper] Test setup, not cleaning
[2026-03-18 21:16:23] 2026-03-18 20:16:23,422 [wrapper] apfmon messages muted
[2026-03-18 21:16:23] 2026-03-18 20:16:23,423 [wrapper] ==== wrapper stdout END ====
[2026-03-18 21:16:23] 2026-03-18 20:16:23,425 [wrapper] ==== wrapper stderr END ====
[2026-03-18 21:16:23]  *** Error codes and diagnostics ***
[2026-03-18 21:16:23]     "exeErrorCode": 0,
[2026-03-18 21:16:23]     "exeErrorDiag": "",
[2026-03-18 21:16:23]     "pilotErrorCode": 0,
[2026-03-18 21:16:23]     "pilotErrorDiag": "",
[2026-03-18 21:16:23]  *** Listing of results directory ***
[2026-03-18 21:16:23] total 470540
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 21:16:23] -rwx------. 1 boinc boinc     36322 Mar 16 14:33 runpilot2-wrapper.sh
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc       100 Mar 18 17:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 21:16:23] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 17:43 run_atlas
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc       105 Mar 18 17:43 job.xml
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc      6709 Mar 18 17:43 init_data.xml
[2026-03-18 21:16:23] -rw-r--r--. 2 boinc boinc 234558051 Mar 18 17:43 EVNT.49136164._000012.pool.root.1
[2026-03-18 21:16:23] -rw-r--r--. 2 boinc boinc     15845 Mar 18 17:43 start_atlas.sh
[2026-03-18 21:16:23] drwxrwx--x. 2 boinc boinc      4096 Mar 18 17:43 shared
[2026-03-18 21:16:23] -rw-r--r--. 2 boinc boinc    596141 Mar 18 17:43 input.tar.gz
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc         0 Mar 18 17:43 boinc_lockfile
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc      2629 Mar 18 17:43 pandaJob.out
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc      5111 Mar 18 17:43 queuedata.json
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc   1011280 Mar 18 17:43 agis_schedconf.cvmfs.json
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc       445 Mar 18 17:43 workernode_map.json
[2026-03-18 21:16:23] drwx------. 5 boinc boinc      4096 Mar 18 17:43 pilot3
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc 239005671 Mar 18 21:15 HITS.49177032._000291.pool.root.1
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc       530 Mar 18 21:15 boinc_task_state.xml
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc      1029 Mar 18 21:15 memory_monitor_summary.json
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc   1511579 Mar 18 21:15 agis_ddmendpoints.agis.ALL.json
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc    387346 Mar 18 21:15 log.49177032._000291.job.log.tgz.1
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc      6349 Mar 18 21:15 heartbeat.json
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc      8192 Mar 18 21:15 boinc_mmap_file
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc        28 Mar 18 21:15 wrapper_checkpoint.txt
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc        95 Mar 18 21:16 pilot_heartbeat.json
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc      5363 Mar 18 21:16 pilotlog.txt
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc   1785364 Mar 18 21:16 log.49177032._000291.job.log.1
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc       357 Mar 18 21:16 output.list
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc       620 Mar 18 21:16 runtime_log
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc   2191360 Mar 18 21:16 result.tar.gz
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc      9222 Mar 18 21:16 runtime_log.err
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc       665 Mar 18 21:16 iBUNDm1FNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmb6tLDmgv5Hun.diag
[2026-03-18 21:16:23] -rw-r--r--. 1 boinc boinc      7487 Mar 18 21:16 stderr.txt
[2026-03-18 21:16:23] HITS file was successfully produced:
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc 239005671 Mar 18 21:15 shared/HITS.pool.root.1
[2026-03-18 21:16:23]  *** Contents of shared directory: ***
[2026-03-18 21:16:23] total 465216
[2026-03-18 21:16:23] -rw-r--r--. 2 boinc boinc 234558051 Mar 18 17:43 ATLAS.root_0
[2026-03-18 21:16:23] -rw-r--r--. 2 boinc boinc     15845 Mar 18 17:43 start_atlas.sh
[2026-03-18 21:16:23] -rw-r--r--. 2 boinc boinc    596141 Mar 18 17:43 input.tar.gz
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc 239005671 Mar 18 21:15 HITS.pool.root.1
[2026-03-18 21:16:23] -rw-------. 1 boinc boinc   2191360 Mar 18 21:16 result.tar.gz
21:16:24 (3180073): run_atlas exited; CPU time 49967.951697
21:16:24 (3180073): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN