Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:59:29 (3947258): wrapper (7.7.26015): starting
09:59:29 (3947258): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 09:59:29] Arguments: --nthreads 4
[2026-03-17 09:59:29] Threads: 4
[2026-03-17 09:59:29] Checking for CVMFS
[2026-03-17 09:59:29] No cvmfs_config command found, will try listing directly
[2026-03-17 09:59:29] CVMFS is ok
[2026-03-17 09:59:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 09:59:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 09:59:29] Further information can be found at the LHC@home message board.
[2026-03-17 09:59:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 09:59:29] Checking for apptainer binary...
[2026-03-17 09:59:29] which: no apptainer in ((null))
[2026-03-17 09:59:29] apptainer is not installed, using version from CVMFS
[2026-03-17 09:59:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 09:59:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-17 09:59:29] apptainer works
[2026-03-17 09:59:29] Set ATHENA_PROC_NUMBER=4
[2026-03-17 09:59:29] Set ATHENA_CORE_NUMBER=4
[2026-03-17 09:59:29] Starting ATLAS job with PandaID=7056913587
[2026-03-17 09:59:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:52:15 (117585): wrapper (7.7.26015): starting
10:52:15 (117585): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 10:52:15] Arguments: --nthreads 4
[2026-03-17 10:52:15] Threads: 4
[2026-03-17 10:52:15] This job has been restarted, cleaning up previous attempt
[2026-03-17 10:52:15] Checking for CVMFS
[2026-03-17 10:52:15] No cvmfs_config command found, will try listing directly
[2026-03-17 10:52:15] CVMFS is ok
[2026-03-17 10:52:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 10:52:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 10:52:15] Further information can be found at the LHC@home message board.
[2026-03-17 10:52:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 10:52:15] Checking for apptainer binary...
[2026-03-17 10:52:15] which: no apptainer in ((null))
[2026-03-17 10:52:15] apptainer is not installed, using version from CVMFS
[2026-03-17 10:52:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 10:52:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-17 10:52:15] apptainer works
[2026-03-17 10:52:15] Set ATHENA_PROC_NUMBER=4
[2026-03-17 10:52:15] Set ATHENA_CORE_NUMBER=4
[2026-03-17 10:52:15] Starting ATLAS job with PandaID=7056913587
[2026-03-17 10:52:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 14:10:51]  *** The last 200 lines of the pilot log: ***
[2026-03-17 14:10:51] 2026-03-17 13:10:02,416 | INFO     | mean y: 2331869.407216495
[2026-03-17 14:10:51] 2026-03-17 13:10:02,416 | INFO     | intersect: -18760820719.889545
[2026-03-17 14:10:51] 2026-03-17 13:10:02,416 | INFO     | chi2: 1.068133298605049
[2026-03-17 14:10:51] 2026-03-17 13:10:02,416 | INFO     | sum of square deviations: 2093397390.0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | sum of deviations: 23229865608.999992
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | mean x: 1773746903.0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | mean y: 2331226.412698413
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | intersect: -19680459235.58838
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | chi2: 1.0685200304856721
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | current chi2=1.0685200304856721 (change=-0.03620633128171129 %)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | right removable region: 188
[2026-03-17 14:10:51] 2026-03-17 13:10:02,417 | INFO     | sum of square deviations: 2093397390.0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,418 | INFO     | sum of deviations: 4212900705.999999
[2026-03-17 14:10:51] 2026-03-17 13:10:02,418 | INFO     | mean x: 1773747208.0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,418 | INFO     | mean y: 2349248.0105820107
[2026-03-17 14:10:51] 2026-03-17 13:10:02,418 | INFO     | intersect: -3567264863.7413807
[2026-03-17 14:10:51] 2026-03-17 13:10:02,418 | INFO     | chi2: 0.0013419995188843508
[2026-03-17 14:10:51] 2026-03-17 13:10:02,419 | INFO     | current chi2=0.0013419995188843508 (change=99.87436029560757 %)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,419 | INFO     | sum of square deviations: 1931608310.0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,419 | INFO     | sum of deviations: 3402272926.0000005
[2026-03-17 14:10:51] 2026-03-17 13:10:02,419 | INFO     | mean x: 1773747360.5
[2026-03-17 14:10:51] 2026-03-17 13:10:02,419 | INFO     | mean y: 2350009.304347826
[2026-03-17 14:10:51] 2026-03-17 13:10:02,419 | INFO     | intersect: -3121871703.2193017
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | chi2: 0.0009998520957375486
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | current chi2=0.0009998520957375486 (change=25.495346185462186 %)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | sum of square deviations: 1778377530.0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | sum of deviations: 3208499471.9999995
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | mean x: 1773747513.0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | mean y: 2350198.5642458103
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | intersect: -3197795925.0329256
[2026-03-17 14:10:51] 2026-03-17 13:10:02,420 | INFO     | chi2: 0.0009079027175540623
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | current chi2=0.0009079027175540623 (change=9.196297990020126 %)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | left removable region: 30
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | sum of square deviations: 1223016419.5
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | sum of deviations: 2305491675.4999995
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | mean x: 1773747787.5
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | mean y: 2350898.601265823
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | intersect: -3341317014.0418253
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | chi2: 0.0002428730639532506
[2026-03-17 14:10:51] 2026-03-17 13:10:02,421 | INFO     | current memory leak: 1.89 B/s (using 158 data points, chi2=0.00)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | could have reported an average CPU frequency of 3589 MHz (10 samples)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | ..............................
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . Timing measurements:
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . get job = 0 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . initial setup = 1 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . payload setup = 5 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . stage-in = 0 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . payload execution = 11830 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . stage-out = 0 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | . log creation = 0 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,422 | INFO     | ..............................
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | 
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | job summary report
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | --------------------------------------------------
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | PanDA job id: 7056913587
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | task id: 49177075
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | errors: (none)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | pilot state: finished 
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | transexitcode: 0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | exeerrorcode: 0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | exeerrordiag: 
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | exitcode: 0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | exitmsg: OK
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | cpuconsumptiontime: 45573 s
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | nevents: 400
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | neventsw: 0
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | pid: 125455
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | pgrp: 125455
[2026-03-17 14:10:51] 2026-03-17 13:10:02,555 | INFO     | corecount: 4
[2026-03-17 14:10:51] 2026-03-17 13:10:02,556 | INFO     | event service: False
[2026-03-17 14:10:51] 2026-03-17 13:10:02,556 | INFO     | sizes: {0: 2280320, 11: 2280320, 11840: 2309896, 11841: 2318918, 11843: 2318974, 11845: 2319168}
[2026-03-17 14:10:51] 2026-03-17 13:10:02,556 | INFO     | --------------------------------------------------
[2026-03-17 14:10:51] 2026-03-17 13:10:02,556 | INFO     | 
[2026-03-17 14:10:51] 2026-03-17 13:10:02,556 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/1
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | job 7056913587 has completed (purged errors)
[2026-03-17 14:10:51] 2026-03-17 13:10:02,585 | INFO     | overall cleanup function is called
[2026-03-17 14:10:51] 2026-03-17 13:10:03,593 | INFO     | --- collectZombieJob: --- 10, [125455]
[2026-03-17 14:10:51] 2026-03-17 13:10:03,593 | INFO     | zombie collector waiting for pid 125455
[2026-03-17 14:10:51] 2026-03-17 13:10:03,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 14:10:51] 2026-03-17 13:10:03,594 | INFO     | collected zombie processes
[2026-03-17 14:10:51] 2026-03-17 13:10:03,594 | INFO     | will attempt to kill all subprocesses of pid=125455
[2026-03-17 14:10:51] 2026-03-17 13:10:04,285 | WARNING  | process 125455 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 14:10:51] 2026-03-17 13:10:04,980 | INFO     | process IDs to be killed: [125455] (in reverse order)
[2026-03-17 14:10:51] 2026-03-17 13:10:05,098 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 14:10:51] 2026-03-17 13:10:05,099 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 14:10:51] 2026-03-17 13:10:05,099 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-17 14:10:51] 2026-03-17 13:10:05,099 | WARNING  | maxPSS not found in memory monitor output
[2026-03-17 14:10:51] 2026-03-17 13:10:05,100 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7056913587/payload.stdout) since it has not been created yet
[2026-03-17 14:10:51] 2026-03-17 13:10:05,100 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-03-17 14:10:51] 2026-03-17 13:10:05,117 | INFO     | sufficient remaining disk space (24134025216 B)
[2026-03-17 14:10:51] 2026-03-17 13:10:05,118 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-17 14:10:51] 2026-03-17 13:10:05,118 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7056913587/HITS.49177075._000120.pool.root.1 since it does not exist
[2026-03-17 14:10:51] 2026-03-17 13:10:05,263 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 14:10:51] 2026-03-17 13:10:05,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 14:10:51] 2026-03-17 13:10:05,336 | INFO     | did not find any defunct processes belonging to 125455
[2026-03-17 14:10:51] 2026-03-17 13:10:05,385 | INFO     | did not find any defunct processes belonging to 125455
[2026-03-17 14:10:51] 2026-03-17 13:10:05,385 | INFO     | ready for new job
[2026-03-17 14:10:51] 2026-03-17 13:10:05,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 14:10:51] 2026-03-17 13:10:05,387 | INFO     | **************************************
[2026-03-17 14:10:51] 2026-03-17 13:10:05,388 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 14:10:51] 2026-03-17 13:10:05,388 | INFO     | **************************************
[2026-03-17 14:10:51] 2026-03-17 13:10:05,388 | INFO     | 
[2026-03-17 14:10:51] 2026-03-17 13:10:05,397 | INFO     | architecture information:
[2026-03-17 14:10:51] 2026-03-17 13:10:05,398 | INFO     | executing command: cat /etc/os-release
[2026-03-17 14:10:51] 2026-03-17 13:10:05,413 | INFO     | cat /etc/os-release:
[2026-03-17 14:10:51] NAME="CentOS Linux"
[2026-03-17 14:10:51] VERSION="7 (Core)"
[2026-03-17 14:10:51] ID="centos"
[2026-03-17 14:10:51] ID_LIKE="rhel fedora"
[2026-03-17 14:10:51] VERSION_ID="7"
[2026-03-17 14:10:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 14:10:51] ANSI_COLOR="0;31"
[2026-03-17 14:10:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 14:10:51] HOME_URL="https://www.centos.org/"
[2026-03-17 14:10:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 14:10:51] 
[2026-03-17 14:10:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 14:10:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 14:10:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 14:10:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 14:10:51] 
[2026-03-17 14:10:51] 2026-03-17 13:10:05,414 | INFO     | **************************************
[2026-03-17 14:10:51] 2026-03-17 13:10:05,666 | INFO     | number of running child processes to parent process 125455: 1
[2026-03-17 14:10:51] 2026-03-17 13:10:05,666 | INFO     | maximum number of monitored processes: 6
[2026-03-17 14:10:51] 2026-03-17 13:10:05,666 | INFO     | aborting job monitoring since job object (job id=7056913587) has expired
[2026-03-17 14:10:51] 2026-03-17 13:10:05,916 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-03-17 14:10:51] 2026-03-17 13:10:05,934 | INFO     | sufficient remaining disk space (24135073792 B)
[2026-03-17 14:10:51] 2026-03-17 13:10:05,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 14:10:51] 2026-03-17 13:10:05,935 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 14:10:51] 2026-03-17 13:10:05,935 | INFO     | update_server=False
[2026-03-17 14:10:51] 2026-03-17 13:10:05,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 14:10:51] 2026-03-17 13:10:05,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:10:51] 2026-03-17 13:10:05,935 | INFO     | will abort loop
[2026-03-17 14:10:51] 2026-03-17 13:10:06,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 14:10:51] 2026-03-17 13:10:06,429 | INFO     | all data control threads have been joined
[2026-03-17 14:10:51] 2026-03-17 13:10:06,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 14:10:51] 2026-03-17 13:10:06,672 | INFO     | all job control threads have been joined
[2026-03-17 14:10:51] 2026-03-17 13:10:06,831 | INFO     | all payload control threads have been joined
[2026-03-17 14:10:51] 2026-03-17 13:10:06,940 | INFO     | [job] retrieve thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:06,940 | INFO     | [job] job monitor thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,109 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,260 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,434 | INFO     | [data] control thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:10:51] 2026-03-17 13:10:07,565 | INFO     | [data] copytool_in thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,677 | INFO     | [job] control thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,756 | INFO     | [payload] failed_post thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,793 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,836 | INFO     | [payload] control thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:07,854 | INFO     | [payload] validate_post thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:08,192 | INFO     | [data] copytool_out thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:08,285 | INFO     | [job] validate thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:08,486 | INFO     | [job] queue monitor thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:10,528 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:16,517 | INFO     | job.realtimelogging is not enabled
[2026-03-17 14:10:51] 2026-03-17 13:10:17,522 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 14:10:51] 2026-03-17 13:10:35,546 | INFO     | PID=122190 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 14:10:51] 2026-03-17 13:10:35,546 | INFO     | .. there are 43 such processes running
[2026-03-17 14:10:51] 2026-03-17 13:10:35,546 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 14:10:51] 2026-03-17 13:10:35,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 14:10:51] 2026-03-17 13:10:35,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 14:10:51] 2026-03-17 13:10:45,506 | INFO     | [monitor] cgroup control has ended
[2026-03-17 14:10:51] 2026-03-17 13:10:46,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22987126769472)>', '<ExcThread(monitor, started 22986888591104)>']
[2026-03-17 14:10:51] 2026-03-17 13:10:46,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 14:10:51] 2026-03-17 13:10:46,602 | INFO     | [monitor] control thread has ended
[2026-03-17 14:10:51] 2026-03-17 13:10:51,323 | INFO     | all workflow threads have been joined
[2026-03-17 14:10:51] 2026-03-17 13:10:51,323 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 14:10:51] 2026-03-17 13:10:51,323 | INFO     | traces error code: 0
[2026-03-17 14:10:51] 2026-03-17 13:10:51,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 14:10:51] 2026-03-17 13:10:51,521 [wrapper] ==== pilot stdout END ====
[2026-03-17 14:10:51] 2026-03-17 13:10:51,523 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 14:10:51] 2026-03-17 13:10:51,525 [wrapper] pilotpid: 122190
[2026-03-17 14:10:51] 2026-03-17 13:10:51,527 [wrapper] Pilot exit status: 0
[2026-03-17 14:10:51] 2026-03-17 13:10:51,534 [wrapper] pandaids: 7056913587 7056913587
[2026-03-17 14:10:51] 2026-03-17 13:10:51,672 [wrapper] cleanup supervisor_pilot  993181 122191
[2026-03-17 14:10:51] 2026-03-17 13:10:51,676 [wrapper] Test setup, not cleaning
[2026-03-17 14:10:51] 2026-03-17 13:10:51,680 [wrapper] apfmon messages muted
[2026-03-17 14:10:51] 2026-03-17 13:10:51,684 [wrapper] ==== wrapper stdout END ====
[2026-03-17 14:10:51] 2026-03-17 13:10:51,687 [wrapper] ==== wrapper stderr END ====
[2026-03-17 14:10:51]  *** Error codes and diagnostics ***
[2026-03-17 14:10:51]     "exeErrorCode": 0,
[2026-03-17 14:10:51]     "exeErrorDiag": "",
[2026-03-17 14:10:51]     "pilotErrorCode": 0,
[2026-03-17 14:10:51]     "pilotErrorDiag": "",
[2026-03-17 14:10:51]  *** Listing of results directory ***
[2026-03-17 14:10:51] total 683680
[2026-03-17 14:10:51] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-17 14:10:51] -rwx------. 1 boinc boinc     36322 Mar 16 14:31 runpilot2-wrapper.sh
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc       100 Mar 17 09:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 14:10:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 09:59 run_atlas
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc       105 Mar 17 09:59 job.xml
[2026-03-17 14:10:51] -rw-r--r--. 2 boinc boinc    596144 Mar 17 09:59 input.tar.gz
[2026-03-17 14:10:51] -rw-r--r--. 3 boinc boinc 229940896 Mar 17 09:59 EVNT.49136351._000005.pool.root.1
[2026-03-17 14:10:51] -rw-r--r--. 3 boinc boinc 229940896 Mar 17 09:59 ATLAS.root_0
[2026-03-17 14:10:51] -rw-r--r--. 2 boinc boinc     15845 Mar 17 09:59 start_atlas.sh
[2026-03-17 14:10:51] drwxrwx--x. 2 boinc boinc      4096 Mar 17 09:59 shared
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc         0 Mar 17 09:59 boinc_lockfile
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc      2617 Mar 17 10:52 pandaJob.out
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc      5111 Mar 17 10:52 queuedata.json
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc   1005733 Mar 17 10:52 agis_schedconf.cvmfs.json
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc       444 Mar 17 10:52 workernode_map.json
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc      6712 Mar 17 11:00 init_data.xml
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc 232185866 Mar 17 14:09 HITS.49177075._000120.pool.root.1
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc       529 Mar 17 14:09 boinc_task_state.xml
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc      1035 Mar 17 14:09 memory_monitor_summary.json
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc   1511579 Mar 17 14:09 agis_ddmendpoints.agis.ALL.json
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc    377700 Mar 17 14:09 log.49177075._000120.job.log.tgz.1
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc      6351 Mar 17 14:10 heartbeat.json
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc      8192 Mar 17 14:10 boinc_mmap_file
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc        27 Mar 17 14:10 wrapper_checkpoint.txt
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc        97 Mar 17 14:10 pilot_heartbeat.json
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc      5191 Mar 17 14:10 pilotlog.txt
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc   1658507 Mar 17 14:10 log.49177075._000120.job.log.1
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc       357 Mar 17 14:10 output.list
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc       620 Mar 17 14:10 runtime_log
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc   2058240 Mar 17 14:10 result.tar.gz
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc      9299 Mar 17 14:10 runtime_log.err
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc       790 Mar 17 14:10 n9ZMDm4DNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQ6wLDm0sR6Vm.diag
[2026-03-17 14:10:51] -rw-r--r--. 1 boinc boinc     23216 Mar 17 14:10 stderr.txt
[2026-03-17 14:10:51] HITS file was successfully produced:
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc 232185866 Mar 17 14:09 shared/HITS.pool.root.1
[2026-03-17 14:10:51]  *** Contents of shared directory: ***
[2026-03-17 14:10:51] total 453920
[2026-03-17 14:10:51] -rw-r--r--. 2 boinc boinc    596144 Mar 17 09:59 input.tar.gz
[2026-03-17 14:10:51] -rw-r--r--. 3 boinc boinc 229940896 Mar 17 09:59 ATLAS.root_0
[2026-03-17 14:10:51] -rw-r--r--. 2 boinc boinc     15845 Mar 17 09:59 start_atlas.sh
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc 232185866 Mar 17 14:09 HITS.pool.root.1
[2026-03-17 14:10:51] -rw-------. 1 boinc boinc   2058240 Mar 17 14:10 result.tar.gz
14:10:53 (117585): run_atlas exited; CPU time 46138.946649
14:10:53 (117585): called boinc_finish(0)

</stderr_txt>
]]>

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