Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:58 (1679212): wrapper (7.7.26015): starting
21:40:58 (1679212): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 21:40:58] Arguments: --nthreads 4
[2026-03-18 21:40:58] Threads: 4
[2026-03-18 21:40:58] Checking for CVMFS
[2026-03-18 21:40:58] No cvmfs_config command found, will try listing directly
[2026-03-18 21:40:58] CVMFS is ok
[2026-03-18 21:40:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 21:40:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 21:40:58] Further information can be found at the LHC@home message board.
[2026-03-18 21:40:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 21:40:58] Checking for apptainer binary...
[2026-03-18 21:40:58] which: no apptainer in ((null))
[2026-03-18 21:40:58] apptainer is not installed, using version from CVMFS
[2026-03-18 21:40:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 21:40:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-18 21:40:58] apptainer works
[2026-03-18 21:40:58] Set ATHENA_PROC_NUMBER=4
[2026-03-18 21:40:58] Set ATHENA_CORE_NUMBER=4
[2026-03-18 21:40:58] Starting ATLAS job with PandaID=7056913550
[2026-03-18 21:40:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 01:14:38]  *** The last 200 lines of the pilot log: ***
[2026-03-19 01:14:38] 2026-03-19 00:13:38,834 | INFO     | job 7056913550 has state=finished
[2026-03-19 01:14:38] 2026-03-19 00:13:38,834 | INFO     | preparing for final server update for job 7056913550 in state='finished'
[2026-03-19 01:14:38] 2026-03-19 00:13:38,834 | INFO     | reading metadata from: /var/lib/boinc/var/slot92/slots/4/PanDA_Pilot-7056913550/jobReport.json
[2026-03-19 01:14:38] 2026-03-19 00:13:38,836 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot92/slots/4/workernode_map.json
[2026-03-19 01:14:38] 2026-03-19 00:13:38,836 | INFO     | this job has now completed (state=finished)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,837 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,837 | INFO     | log transfer has been attempted: DONE
[2026-03-19 01:14:38] 2026-03-19 00:13:38,837 | INFO     | job 7056913550 has finished - writing final server update
[2026-03-19 01:14:38] 2026-03-19 00:13:38,837 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2953269/.job.ad'
[2026-03-19 01:14:38] 2026-03-19 00:13:38,837 | INFO     | total number of processed events: 400 (read)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,855 | INFO     | using path: /var/lib/boinc/var/slot92/slots/4/PanDA_Pilot-7056913550/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,855 | INFO     | extracted standard info from prmon json
[2026-03-19 01:14:38] 2026-03-19 00:13:38,855 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 01:14:38] 2026-03-19 00:13:38,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 01:14:38] 2026-03-19 00:13:38,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 01:14:38] 2026-03-19 00:13:38,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 01:14:38] 2026-03-19 00:13:38,858 | INFO     | fitting pss+swap vs Time
[2026-03-19 01:14:38] 2026-03-19 00:13:38,858 | INFO     | sum of square deviations: 2830787960.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,859 | INFO     | sum of deviations: 15262642189.000004
[2026-03-19 01:14:38] 2026-03-19 00:13:38,859 | INFO     | mean x: 1773872838.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,859 | INFO     | mean y: 2335559.588516746
[2026-03-19 01:14:38] 2026-03-19 00:13:38,859 | INFO     | intersect: -9561781144.927906
[2026-03-19 01:14:38] 2026-03-19 00:13:38,859 | INFO     | chi2: 1.0876081582215065
[2026-03-19 01:14:38] 2026-03-19 00:13:38,859 | INFO     | sum of square deviations: 2632440055.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | sum of deviations: 14680871311.499996
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | mean x: 1773872685.5
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | mean y: 2335115.06372549
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | intersect: -9890386494.815594
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | chi2: 1.087943759040813
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | current chi2=1.087943759040813 (change=-0.03085677656696588 %)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | right removable region: 203
[2026-03-19 01:14:38] 2026-03-19 00:13:38,860 | INFO     | sum of square deviations: 2632440055.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,861 | INFO     | sum of deviations: -4661750082.5
[2026-03-19 01:14:38] 2026-03-19 00:13:38,861 | INFO     | mean x: 1773872990.5
[2026-03-19 01:14:38] 2026-03-19 00:13:38,861 | INFO     | mean y: 2350642.0833333335
[2026-03-19 01:14:38] 2026-03-19 00:13:38,861 | INFO     | intersect: 3143676707.2680907
[2026-03-19 01:14:38] 2026-03-19 00:13:38,861 | INFO     | chi2: 0.0053183481086833
[2026-03-19 01:14:38] 2026-03-19 00:13:38,861 | INFO     | current chi2=0.0053183481086833 (change=99.51100512914687 %)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | sum of square deviations: 2443580700.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | sum of deviations: -4269361025.0000014
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | mean x: 1773873143.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | mean y: 2350322.2211055276
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | intersect: 3101615617.6207848
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | chi2: 0.005241001523413148
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | current chi2=0.005241001523413148 (change=1.4543347612742268 %)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,862 | INFO     | left removable region: 20
[2026-03-19 01:14:38] 2026-03-19 00:13:38,863 | INFO     | sum of square deviations: 1900284932.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,863 | INFO     | sum of deviations: -2062874942.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,863 | INFO     | mean x: 1773873265.0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,863 | INFO     | mean y: 2348117.568306011
[2026-03-19 01:14:38] 2026-03-19 00:13:38,863 | INFO     | intersect: 1927995501.8271134
[2026-03-19 01:14:38] 2026-03-19 00:13:38,863 | INFO     | chi2: 0.0031267937753577785
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | current memory leak: -1.09 B/s (using 183 data points, chi2=0.00)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | could have reported an average CPU frequency of 3575 MHz (11 samples)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | ..............................
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . Timing measurements:
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . get job = 0 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . initial setup = 5 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . payload setup = 7 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . stage-in = 0 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . payload execution = 12718 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . stage-out = 0 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | . log creation = 0 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,864 | INFO     | ..............................
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | 
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | job summary report
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | --------------------------------------------------
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | PanDA job id: 7056913550
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | task id: 49177075
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | errors: (none)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | pilot state: finished 
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | transexitcode: 0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | exeerrorcode: 0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | exeerrordiag: 
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | exitcode: 0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | exitmsg: OK
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | cpuconsumptiontime: 49598 s
[2026-03-19 01:14:38] 2026-03-19 00:13:38,917 | INFO     | nevents: 400
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | neventsw: 0
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | pid: 1696780
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | pgrp: 1696780
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | corecount: 4
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | event service: False
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | sizes: {0: 2280053, 1: 2280315, 11: 2280343, 12729: 2310301, 12731: 2319321, 12734: 2319377, 12737: 2319699}
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | --------------------------------------------------
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | 
[2026-03-19 01:14:38] 2026-03-19 00:13:38,918 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/4
[2026-03-19 01:14:38] 2026-03-19 00:13:38,932 | INFO     | time since job start (12747s) is within the limit (345600.0s)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | job 7056913550 has completed (purged errors)
[2026-03-19 01:14:38] 2026-03-19 00:13:38,939 | INFO     | overall cleanup function is called
[2026-03-19 01:14:38] 2026-03-19 00:13:39,945 | INFO     | --- collectZombieJob: --- 10, [1696780]
[2026-03-19 01:14:38] 2026-03-19 00:13:39,946 | INFO     | zombie collector waiting for pid 1696780
[2026-03-19 01:14:38] 2026-03-19 00:13:39,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 01:14:38] 2026-03-19 00:13:39,946 | INFO     | collected zombie processes
[2026-03-19 01:14:38] 2026-03-19 00:13:39,946 | INFO     | will attempt to kill all subprocesses of pid=1696780
[2026-03-19 01:14:38] 2026-03-19 00:13:40,404 | INFO     | process IDs to be killed: [1696780] (in reverse order)
[2026-03-19 01:14:38] 2026-03-19 00:13:40,634 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 01:14:38] 2026-03-19 00:13:40,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 01:14:38] 2026-03-19 00:13:40,665 | INFO     | did not find any defunct processes belonging to 1696780
[2026-03-19 01:14:38] 2026-03-19 00:13:40,696 | INFO     | did not find any defunct processes belonging to 1696780
[2026-03-19 01:14:38] 2026-03-19 00:13:40,697 | INFO     | ready for new job
[2026-03-19 01:14:38] 2026-03-19 00:13:40,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 01:14:38] 2026-03-19 00:13:40,699 | INFO     | **************************************
[2026-03-19 01:14:38] 2026-03-19 00:13:40,699 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 01:14:38] 2026-03-19 00:13:40,699 | INFO     | **************************************
[2026-03-19 01:14:38] 2026-03-19 00:13:40,699 | INFO     | 
[2026-03-19 01:14:38] 2026-03-19 00:13:40,705 | INFO     | architecture information:
[2026-03-19 01:14:38] 2026-03-19 00:13:40,705 | INFO     | executing command: cat /etc/os-release
[2026-03-19 01:14:38] 2026-03-19 00:13:40,720 | INFO     | cat /etc/os-release:
[2026-03-19 01:14:38] NAME="CentOS Linux"
[2026-03-19 01:14:38] VERSION="7 (Core)"
[2026-03-19 01:14:38] ID="centos"
[2026-03-19 01:14:38] ID_LIKE="rhel fedora"
[2026-03-19 01:14:38] VERSION_ID="7"
[2026-03-19 01:14:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 01:14:38] ANSI_COLOR="0;31"
[2026-03-19 01:14:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 01:14:38] HOME_URL="https://www.centos.org/"
[2026-03-19 01:14:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 01:14:38] 
[2026-03-19 01:14:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 01:14:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 01:14:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 01:14:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 01:14:38] 
[2026-03-19 01:14:38] 2026-03-19 00:13:40,720 | INFO     | **************************************
[2026-03-19 01:14:38] 2026-03-19 00:13:41,223 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/4
[2026-03-19 01:14:38] 2026-03-19 00:13:41,239 | INFO     | sufficient remaining disk space (25115492352 B)
[2026-03-19 01:14:38] 2026-03-19 00:13:41,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 01:14:38] 2026-03-19 00:13:41,239 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 01:14:38] 2026-03-19 00:13:41,239 | INFO     | update_server=False
[2026-03-19 01:14:38] 2026-03-19 00:13:41,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 01:14:38] 2026-03-19 00:13:41,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:14:38] 2026-03-19 00:13:41,240 | INFO     | aborting loop
[2026-03-19 01:14:38] 2026-03-19 00:13:41,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 01:14:38] 2026-03-19 00:13:41,555 | INFO     | all job control threads have been joined
[2026-03-19 01:14:38] 2026-03-19 00:13:41,900 | INFO     | all data control threads have been joined
[2026-03-19 01:14:38] 2026-03-19 00:13:42,048 | INFO     | all payload control threads have been joined
[2026-03-19 01:14:38] 2026-03-19 00:13:42,241 | INFO     | [job] job monitor thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,244 | INFO     | [job] retrieve thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,287 | INFO     | [payload] validate_post thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,420 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 01:14:38] 2026-03-19 00:13:42,560 | INFO     | [job] control thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,661 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,804 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,876 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,906 | INFO     | [data] control thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:42,908 | INFO     | [job] validate thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:43,054 | INFO     | [payload] control thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:43,198 | INFO     | [data] copytool_in thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:43,308 | INFO     | [data] copytool_out thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:43,655 | INFO     | [payload] failed_post thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:43,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 01:14:38] 2026-03-19 00:13:44,936 | INFO     | [job] queue monitor thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:13:46,529 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 01:14:38] 2026-03-19 00:14:12,551 | INFO     | PID=1683865 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 01:14:38] 2026-03-19 00:14:12,552 | INFO     | .. there are 47 such processes running
[2026-03-19 01:14:38] 2026-03-19 00:14:12,552 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 01:14:38] 2026-03-19 00:14:12,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 01:14:38] 2026-03-19 00:14:12,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 01:14:38] 2026-03-19 00:14:31,831 | INFO     | [monitor] cgroup control has ended
[2026-03-19 01:14:38] 2026-03-19 00:14:33,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23085983651648)>', '<ExcThread(monitor, started 23085739935488)>']
[2026-03-19 01:14:38] 2026-03-19 00:14:33,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 01:14:38] 2026-03-19 00:14:33,671 | INFO     | [monitor] control thread has ended
[2026-03-19 01:14:38] 2026-03-19 00:14:38,359 | INFO     | all workflow threads have been joined
[2026-03-19 01:14:38] 2026-03-19 00:14:38,360 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 01:14:38] 2026-03-19 00:14:38,360 | INFO     | traces error code: 0
[2026-03-19 01:14:38] 2026-03-19 00:14:38,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 01:14:38] 2026-03-19 00:14:38,487 [wrapper] ==== pilot stdout END ====
[2026-03-19 01:14:38] 2026-03-19 00:14:38,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 01:14:38] 2026-03-19 00:14:38,491 [wrapper] pilotpid: 1683865
[2026-03-19 01:14:38] 2026-03-19 00:14:38,494 [wrapper] Pilot exit status: 0
[2026-03-19 01:14:38] 2026-03-19 00:14:38,503 [wrapper] pandaids: 7056913550
[2026-03-19 01:14:38] 2026-03-19 00:14:38,632 [wrapper] cleanup supervisor_pilot 2644314 1683866
[2026-03-19 01:14:38] 2026-03-19 00:14:38,635 [wrapper] Test setup, not cleaning
[2026-03-19 01:14:38] 2026-03-19 00:14:38,640 [wrapper] apfmon messages muted
[2026-03-19 01:14:38] 2026-03-19 00:14:38,642 [wrapper] ==== wrapper stdout END ====
[2026-03-19 01:14:38] 2026-03-19 00:14:38,647 [wrapper] ==== wrapper stderr END ====
[2026-03-19 01:14:38]  *** Error codes and diagnostics ***
[2026-03-19 01:14:38]     "exeErrorCode": 0,
[2026-03-19 01:14:38]     "exeErrorDiag": "",
[2026-03-19 01:14:38]     "pilotErrorCode": 0,
[2026-03-19 01:14:38]     "pilotErrorDiag": "",
[2026-03-19 01:14:38]  *** Listing of results directory ***
[2026-03-19 01:14:38] total 468996
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-19 01:14:38] -rwx------. 1 boinc boinc     36322 Mar 16 14:30 runpilot2-wrapper.sh
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:44 queuedata.json
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc       100 Mar 18 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 01:14:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 21:40 run_atlas
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc       105 Mar 18 21:40 job.xml
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc      6707 Mar 18 21:40 init_data.xml
[2026-03-19 01:14:38] -rw-r--r--. 2 boinc boinc 234525319 Mar 18 21:40 EVNT.49136351._000004.pool.root.1
[2026-03-19 01:14:38] -rw-r--r--. 2 boinc boinc     15845 Mar 18 21:40 start_atlas.sh
[2026-03-19 01:14:38] drwxrwx--x. 2 boinc boinc      4096 Mar 18 21:40 shared
[2026-03-19 01:14:38] -rw-r--r--. 2 boinc boinc    597548 Mar 18 21:40 input.tar.gz
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc         0 Mar 18 21:40 boinc_lockfile
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc      2615 Mar 18 21:40 pandaJob.out
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc   1010358 Mar 18 21:41 agis_schedconf.cvmfs.json
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc       444 Mar 18 21:41 workernode_map.json
[2026-03-19 01:14:38] drwx------. 5 boinc boinc      4096 Mar 18 21:41 pilot3
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc 237455583 Mar 19 01:13 HITS.49177075._000083.pool.root.1
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc       530 Mar 19 01:13 boinc_task_state.xml
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc      1030 Mar 19 01:13 memory_monitor_summary.json
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc   1511579 Mar 19 01:13 agis_ddmendpoints.agis.ALL.json
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc    376187 Mar 19 01:13 log.49177075._000083.job.log.tgz.1
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc        95 Mar 19 01:13 pilot_heartbeat.json
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc      6345 Mar 19 01:13 heartbeat.json
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc      8192 Mar 19 01:14 boinc_mmap_file
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc        28 Mar 19 01:14 wrapper_checkpoint.txt
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc      4829 Mar 19 01:14 pilotlog.txt
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc   1788614 Mar 19 01:14 log.49177075._000083.job.log.1
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc       357 Mar 19 01:14 output.list
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc       620 Mar 19 01:14 runtime_log
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc   2181120 Mar 19 01:14 result.tar.gz
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc       665 Mar 19 01:14 wJQNDmBDNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmd3wLDmnzybGn.diag
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc      9205 Mar 19 01:14 runtime_log.err
[2026-03-19 01:14:38] -rw-r--r--. 1 boinc boinc     21138 Mar 19 01:14 stderr.txt
[2026-03-19 01:14:38] HITS file was successfully produced:
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc 237455583 Mar 19 01:13 shared/HITS.pool.root.1
[2026-03-19 01:14:38]  *** Contents of shared directory: ***
[2026-03-19 01:14:38] total 463664
[2026-03-19 01:14:38] -rw-r--r--. 2 boinc boinc 234525319 Mar 18 21:40 ATLAS.root_0
[2026-03-19 01:14:38] -rw-r--r--. 2 boinc boinc     15845 Mar 18 21:40 start_atlas.sh
[2026-03-19 01:14:38] -rw-r--r--. 2 boinc boinc    597548 Mar 18 21:40 input.tar.gz
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc 237455583 Mar 19 01:13 HITS.pool.root.1
[2026-03-19 01:14:38] -rw-------. 1 boinc boinc   2181120 Mar 19 01:14 result.tar.gz
01:14:40 (1679212): run_atlas exited; CPU time 50218.596717
01:14:40 (1679212): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN