Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:43:42 (277474): wrapper (7.7.26015): starting
22:43:42 (277474): wrapper: running run_atlas (--nthreads 2)
[2026-03-19 22:43:42] Arguments: --nthreads 2
[2026-03-19 22:43:42] Threads: 2
[2026-03-19 22:43:42] Checking for CVMFS
[2026-03-19 22:43:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 22:43:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 22:43:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 22:43:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 22:43:45] 2.13.3.0 1801 10312 46032 157472 3 49 3706296 4096000 0 130560 0 880667 99.945 336214 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-03-19 22:43:45] CVMFS is ok
[2026-03-19 22:43:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 22:43:45] Checking for apptainer binary...
[2026-03-19 22:43:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-19 22:43:45] Running /usr/bin/apptainer --version
[2026-03-19 22:43:45] apptainer version 1.3.1
[2026-03-19 22:43:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 22:43:45] ahanllin04
[2026-03-19 22:43:45] apptainer works
[2026-03-19 22:43:45] Set ATHENA_PROC_NUMBER=2
[2026-03-19 22:43:45] Set ATHENA_CORE_NUMBER=2
[2026-03-19 22:43:45] Starting ATLAS job with PandaID=7056911456
[2026-03-19 22:43:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 20:00:34]  *** The last 200 lines of the pilot log: ***
[2026-03-20 20:00:34] 2026-03-20 18:59:33,700 | INFO     | time since job start (76512s) is within the limit (345600.0s)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,129 | INFO     | job 7056911456 has state=finished
[2026-03-20 20:00:34] 2026-03-20 18:59:34,129 | INFO     | preparing for final server update for job 7056911456 in state='finished'
[2026-03-20 20:00:34] 2026-03-20 18:59:34,130 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7056911456/jobReport.json
[2026-03-20 20:00:34] 2026-03-20 18:59:34,134 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-20 20:00:34] 2026-03-20 18:59:34,134 | INFO     | this job has now completed (state=finished)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,135 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,135 | INFO     | log transfer has been attempted: DONE
[2026-03-20 20:00:34] 2026-03-20 18:59:34,135 | INFO     | job 7056911456 has finished - writing final server update
[2026-03-20 20:00:34] 2026-03-20 18:59:34,135 | INFO     | total number of processed events: 400 (read)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,136 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7056911456/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,137 | INFO     | extracted standard info from prmon json
[2026-03-20 20:00:34] 2026-03-20 18:59:34,137 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 20:00:34] 2026-03-20 18:59:34,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 20:00:34] 2026-03-20 18:59:34,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 20:00:34] 2026-03-20 18:59:34,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 20:00:34] 2026-03-20 18:59:34,163 | INFO     | fitting pss+swap vs Time
[2026-03-20 20:00:34] 2026-03-20 18:59:34,165 | INFO     | sum of square deviations: 611463794463.4928
[2026-03-20 20:00:34] 2026-03-20 18:59:34,199 | INFO     | sum of deviations: -84716836407.66501
[2026-03-20 20:00:34] 2026-03-20 18:59:34,200 | INFO     | mean x: 1773994917.5023923
[2026-03-20 20:00:34] 2026-03-20 18:59:34,200 | INFO     | mean y: 2274370.888357257
[2026-03-20 20:00:34] 2026-03-20 18:59:34,200 | INFO     | intersect: 248057095.1884011
[2026-03-20 20:00:34] 2026-03-20 18:59:34,202 | INFO     | chi2: 2.9526231319860714
[2026-03-20 20:00:34] 2026-03-20 18:59:34,204 | INFO     | sum of square deviations: 604178756460.9935
[2026-03-20 20:00:34] 2026-03-20 18:59:34,238 | INFO     | sum of deviations: -15102073370.337894
[2026-03-20 20:00:34] 2026-03-20 18:59:34,239 | INFO     | mean x: 1773994765.0024018
[2026-03-20 20:00:34] 2026-03-20 18:59:34,239 | INFO     | mean y: 2275823.445956765
[2026-03-20 20:00:34] 2026-03-20 18:59:34,239 | INFO     | intersect: 46618658.762761325
[2026-03-20 20:00:34] 2026-03-20 18:59:34,241 | INFO     | chi2: 2.3019554824811426
[2026-03-20 20:00:34] 2026-03-20 18:59:34,241 | INFO     | current chi2=2.3019554824811426 (change=22.03693530868125 %)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,241 | INFO     | right removable region: 1248
[2026-03-20 20:00:34] 2026-03-20 18:59:34,243 | INFO     | sum of square deviations: 604178754630.9935
[2026-03-20 20:00:34] 2026-03-20 18:59:34,277 | INFO     | sum of deviations: -266259440909.10913
[2026-03-20 20:00:34] 2026-03-20 18:59:34,277 | INFO     | mean x: 1773995070.0024018
[2026-03-20 20:00:34] 2026-03-20 18:59:34,277 | INFO     | mean y: 2278163.369895917
[2026-03-20 20:00:34] 2026-03-20 18:59:34,277 | INFO     | intersect: 784071518.2236962
[2026-03-20 20:00:34] 2026-03-20 18:59:34,279 | INFO     | chi2: 1.3180812883007527
[2026-03-20 20:00:34] 2026-03-20 18:59:34,279 | INFO     | current chi2=1.3180812883007527 (change=55.35897304258569 %)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,281 | INFO     | sum of square deviations: 596951808910.9928
[2026-03-20 20:00:34] 2026-03-20 18:59:34,314 | INFO     | sum of deviations: -207907011004.0339
[2026-03-20 20:00:34] 2026-03-20 18:59:34,314 | INFO     | mean x: 1773995222.5024116
[2026-03-20 20:00:34] 2026-03-20 18:59:34,315 | INFO     | mean y: 2276932.011254019
[2026-03-20 20:00:34] 2026-03-20 18:59:34,315 | INFO     | intersect: 620125875.1592016
[2026-03-20 20:00:34] 2026-03-20 18:59:34,316 | INFO     | chi2: 1.2379512387954863
[2026-03-20 20:00:34] 2026-03-20 18:59:34,317 | INFO     | current chi2=1.2379512387954863 (change=6.079294973420693 %)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,317 | INFO     | left removable region: 20
[2026-03-20 20:00:34] 2026-03-20 18:59:34,318 | INFO     | sum of square deviations: 574213343318.997
[2026-03-20 20:00:34] 2026-03-20 18:59:34,350 | INFO     | sum of deviations: -440591939.6156651
[2026-03-20 20:00:34] 2026-03-20 18:59:34,350 | INFO     | mean x: 1773995344.5016286
[2026-03-20 20:00:34] 2026-03-20 18:59:34,351 | INFO     | mean y: 2275427.5578175895
[2026-03-20 20:00:34] 2026-03-20 18:59:34,351 | INFO     | intersect: 3636608.1343353316
[2026-03-20 20:00:34] 2026-03-20 18:59:34,352 | INFO     | chi2: 0.3346965457860744
[2026-03-20 20:00:34] 2026-03-20 18:59:34,353 | INFO     | current memory leak: -0.00 B/s (using 1228 data points, chi2=0.33)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,354 | INFO     | could have reported an average CPU frequency of 2099 MHz (46 samples)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,354 | INFO     | ..............................
[2026-03-20 20:00:34] 2026-03-20 18:59:34,354 | INFO     | . Timing measurements:
[2026-03-20 20:00:34] 2026-03-20 18:59:34,354 | INFO     | . get job = 0 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,354 | INFO     | . initial setup = 9 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,354 | INFO     | . payload setup = 29 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,355 | INFO     | . stage-in = 0 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,355 | INFO     | . payload execution = 76473 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,355 | INFO     | . stage-out = 2 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,355 | INFO     | . log creation = 0 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,355 | INFO     | ..............................
[2026-03-20 20:00:34] 2026-03-20 18:59:34,531 | INFO     | 
[2026-03-20 20:00:34] 2026-03-20 18:59:34,531 | INFO     | job summary report
[2026-03-20 20:00:34] 2026-03-20 18:59:34,532 | INFO     | --------------------------------------------------
[2026-03-20 20:00:34] 2026-03-20 18:59:34,532 | INFO     | PanDA job id: 7056911456
[2026-03-20 20:00:34] 2026-03-20 18:59:34,532 | INFO     | task id: 49177032
[2026-03-20 20:00:34] 2026-03-20 18:59:34,532 | INFO     | errors: (none)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,532 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 20:00:34] 2026-03-20 18:59:34,533 | INFO     | pilot state: finished 
[2026-03-20 20:00:34] 2026-03-20 18:59:34,533 | INFO     | transexitcode: 0
[2026-03-20 20:00:34] 2026-03-20 18:59:34,533 | INFO     | exeerrorcode: 0
[2026-03-20 20:00:34] 2026-03-20 18:59:34,533 | INFO     | exeerrordiag: 
[2026-03-20 20:00:34] 2026-03-20 18:59:34,533 | INFO     | exitcode: 0
[2026-03-20 20:00:34] 2026-03-20 18:59:34,533 | INFO     | exitmsg: OK
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | cpuconsumptiontime: 149444 s
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | nevents: 400
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | neventsw: 0
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | pid: 285856
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | pgrp: 285856
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | corecount: 2
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | event service: False
[2026-03-20 20:00:34] 2026-03-20 18:59:34,534 | INFO     | sizes: {0: 2279889, 1: 2280350, 76507: 2340126, 76511: 2349194, 76512: 2349332}
[2026-03-20 20:00:34] 2026-03-20 18:59:34,535 | INFO     | --------------------------------------------------
[2026-03-20 20:00:34] 2026-03-20 18:59:34,535 | INFO     | 
[2026-03-20 20:00:34] 2026-03-20 18:59:34,535 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-20 20:00:34] 2026-03-20 18:59:34,587 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,587 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,587 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,588 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,590 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 20:00:34] 2026-03-20 18:59:34,590 | INFO     | job 7056911456 has completed (purged errors)
[2026-03-20 20:00:34] 2026-03-20 18:59:34,590 | INFO     | overall cleanup function is called
[2026-03-20 20:00:34] 2026-03-20 18:59:35,600 | INFO     | --- collectZombieJob: --- 10, [285856]
[2026-03-20 20:00:34] 2026-03-20 18:59:35,600 | INFO     | zombie collector waiting for pid 285856
[2026-03-20 20:00:34] 2026-03-20 18:59:35,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 20:00:34] 2026-03-20 18:59:35,601 | INFO     | collected zombie processes
[2026-03-20 20:00:34] 2026-03-20 18:59:35,601 | INFO     | will attempt to kill all subprocesses of pid=285856
[2026-03-20 20:00:34] 2026-03-20 18:59:35,656 | INFO     | process IDs to be killed: [285856] (in reverse order)
[2026-03-20 20:00:34] 2026-03-20 18:59:35,726 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 20:00:34] 2026-03-20 18:59:35,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 20:00:34] 2026-03-20 18:59:35,728 | INFO     | did not find any defunct processes belonging to 285856
[2026-03-20 20:00:34] 2026-03-20 18:59:35,730 | INFO     | did not find any defunct processes belonging to 285856
[2026-03-20 20:00:34] 2026-03-20 18:59:35,730 | INFO     | ready for new job
[2026-03-20 20:00:34] 2026-03-20 18:59:35,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 20:00:34] 2026-03-20 18:59:35,738 | INFO     | **************************************
[2026-03-20 20:00:34] 2026-03-20 18:59:35,738 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 20:00:34] 2026-03-20 18:59:35,738 | INFO     | **************************************
[2026-03-20 20:00:34] 2026-03-20 18:59:35,739 | INFO     | 
[2026-03-20 20:00:34] 2026-03-20 18:59:35,739 | INFO     | pilot is running in a VM
[2026-03-20 20:00:34] 2026-03-20 18:59:35,739 | INFO     | architecture information:
[2026-03-20 20:00:34] 2026-03-20 18:59:35,740 | INFO     | executing command: cat /etc/os-release
[2026-03-20 20:00:34] 2026-03-20 18:59:35,767 | INFO     | cat /etc/os-release:
[2026-03-20 20:00:34] NAME="CentOS Linux"
[2026-03-20 20:00:34] VERSION="7 (Core)"
[2026-03-20 20:00:34] ID="centos"
[2026-03-20 20:00:34] ID_LIKE="rhel fedora"
[2026-03-20 20:00:34] VERSION_ID="7"
[2026-03-20 20:00:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 20:00:34] ANSI_COLOR="0;31"
[2026-03-20 20:00:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 20:00:34] HOME_URL="https://www.centos.org/"
[2026-03-20 20:00:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 20:00:34] 
[2026-03-20 20:00:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 20:00:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 20:00:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 20:00:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 20:00:34] 
[2026-03-20 20:00:34] 2026-03-20 18:59:35,767 | INFO     | **************************************
[2026-03-20 20:00:34] 2026-03-20 18:59:36,271 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-20 20:00:34] 2026-03-20 18:59:36,295 | INFO     | sufficient remaining disk space (19475202048 B)
[2026-03-20 20:00:34] 2026-03-20 18:59:36,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 20:00:34] 2026-03-20 18:59:36,296 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 20:00:34] 2026-03-20 18:59:36,296 | INFO     | update_server=False
[2026-03-20 20:00:34] 2026-03-20 18:59:36,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 20:00:34] 2026-03-20 18:59:36,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 20:00:34] 2026-03-20 18:59:36,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 20:00:34] 2026-03-20 18:59:36,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 20:00:34] 2026-03-20 18:59:36,695 | INFO     | aborting loop
[2026-03-20 20:00:34] 2026-03-20 18:59:36,885 | INFO     | all data control threads have been joined
[2026-03-20 20:00:34] 2026-03-20 18:59:37,303 | INFO     | [job] retrieve thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:37,303 | INFO     | [job] queue monitor thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:37,528 | INFO     | [payload] validate_post thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:37,574 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:37,589 | INFO     | [data] copytool_in thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:37,700 | INFO     | all payload control threads have been joined
[2026-03-20 20:00:34] 2026-03-20 18:59:37,701 | INFO     | [job] job monitor thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:37,702 | INFO     | all job control threads have been joined
[2026-03-20 20:00:34] 2026-03-20 18:59:37,891 | INFO     | [data] control thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:38,042 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:38,095 | INFO     | [job] validate thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:38,217 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:38,303 | INFO     | [data] copytool_out thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:38,707 | INFO     | [payload] control thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:38,707 | INFO     | [job] control thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:38,736 | INFO     | [payload] failed_post thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:39,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 20:00:34] 2026-03-20 18:59:43,638 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 20:00:34] 2026-03-20 18:59:46,822 | INFO     | job.realtimelogging is not enabled
[2026-03-20 20:00:34] 2026-03-20 18:59:47,828 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 20:00:34] 2026-03-20 19:00:06,850 | INFO     | PID=281495 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-20 20:00:34] 2026-03-20 19:00:06,850 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 20:00:34] 2026-03-20 19:00:06,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 20:00:34] 2026-03-20 19:00:06,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 20:00:34] 2026-03-20 19:00:28,461 | INFO     | [monitor] cgroup control has ended
[2026-03-20 20:00:34] 2026-03-20 19:00:28,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132087385614144)>', '<ExcThread(monitor, started 132086593734400)>']
[2026-03-20 20:00:34] 2026-03-20 19:00:28,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 20:00:34] 2026-03-20 19:00:28,965 | INFO     | [monitor] control thread has ended
[2026-03-20 20:00:34] 2026-03-20 19:00:33,586 | INFO     | all workflow threads have been joined
[2026-03-20 20:00:34] 2026-03-20 19:00:33,586 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 20:00:34] 2026-03-20 19:00:33,588 | INFO     | traces error code: 0
[2026-03-20 20:00:34] 2026-03-20 19:00:33,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 20:00:34] 2026-03-20 19:00:33,776 [wrapper] ==== pilot stdout END ====
[2026-03-20 20:00:34] 2026-03-20 19:00:33,783 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 20:00:34] 2026-03-20 19:00:33,789 [wrapper] pilotpid: 281495
[2026-03-20 20:00:34] 2026-03-20 19:00:33,796 [wrapper] Pilot exit status: 0
[2026-03-20 20:00:34] 2026-03-20 19:00:33,824 [wrapper] pandaids: 7056911456
[2026-03-20 20:00:34] 2026-03-20 19:00:33,877 [wrapper] cleanup supervisor_pilot  294122 281496
[2026-03-20 20:00:34] 2026-03-20 19:00:33,884 [wrapper] Test setup, not cleaning
[2026-03-20 20:00:34] 2026-03-20 19:00:33,891 [wrapper] apfmon messages muted
[2026-03-20 20:00:34] 2026-03-20 19:00:33,897 [wrapper] ==== wrapper stdout END ====
[2026-03-20 20:00:34] 2026-03-20 19:00:33,904 [wrapper] ==== wrapper stderr END ====
[2026-03-20 20:00:34]  *** Error codes and diagnostics ***
[2026-03-20 20:00:34]     "exeErrorCode": 0,
[2026-03-20 20:00:34]     "exeErrorDiag": "",
[2026-03-20 20:00:34]     "pilotErrorCode": 0,
[2026-03-20 20:00:34]     "pilotErrorDiag": "",
[2026-03-20 20:00:34]  *** Listing of results directory ***
[2026-03-20 20:00:34] total 485432
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-20 20:00:34] -rwx------ 1 boinc boinc     36322 Mar 16 14:30 runpilot2-wrapper.sh
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc      5111 Mar 16 14:38 queuedata.json
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc       100 Mar 19 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 20:00:34] -rwxr-xr-x 1 boinc boinc      7986 Mar 19 22:43 run_atlas
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc       105 Mar 19 22:43 job.xml
[2026-03-20 20:00:34] -rw-r--r-- 2 boinc boinc 234230615 Mar 19 22:43 EVNT.49136164._000011.pool.root.1
[2026-03-20 20:00:34] drwxrwx--x 2 boinc boinc      4096 Mar 19 22:43 shared
[2026-03-20 20:00:34] -rw-r--r-- 2 boinc boinc    597548 Mar 19 22:43 input.tar.gz
[2026-03-20 20:00:34] -rw-r--r-- 2 boinc boinc     15845 Mar 19 22:43 start_atlas.sh
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc      6482 Mar 19 22:43 init_data.xml
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc         0 Mar 19 22:43 boinc_setup_complete
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc         0 Mar 19 22:43 boinc_lockfile
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc      2629 Mar 19 22:43 pandaJob.out
[2026-03-20 20:00:34] -rw------- 1 boinc boinc        51 Mar 19 22:43 setup.sh.local
[2026-03-20 20:00:34] -rw------- 1 boinc boinc   1010740 Mar 19 22:44 agis_schedconf.cvmfs.json
[2026-03-20 20:00:34] -rw------- 1 boinc boinc       422 Mar 19 22:44 workernode_map.json
[2026-03-20 20:00:34] drwx------ 5 boinc boinc      4096 Mar 19 22:44 pilot3
[2026-03-20 20:00:34] -rw------- 1 boinc boinc 235467641 Mar 20 19:58 HITS.49177032._000264.pool.root.1
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc       531 Mar 20 19:58 boinc_task_state.xml
[2026-03-20 20:00:34] -rw------- 1 boinc boinc        95 Mar 20 19:59 pilot_heartbeat.json
[2026-03-20 20:00:34] -rw------- 1 boinc boinc      1035 Mar 20 19:59 memory_monitor_summary.json
[2026-03-20 20:00:34] -rw------- 1 boinc boinc   1511579 Mar 20 19:59 agis_ddmendpoints.agis.ALL.json
[2026-03-20 20:00:34] -rw------- 1 boinc boinc   1193821 Mar 20 19:59 log.49177032._000264.job.log.tgz.1
[2026-03-20 20:00:34] -rw------- 1 boinc boinc      6369 Mar 20 19:59 heartbeat.json
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc      8192 Mar 20 20:00 boinc_mmap_file
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc        29 Mar 20 20:00 wrapper_checkpoint.txt
[2026-03-20 20:00:34] -rw------- 1 boinc boinc      4884 Mar 20 20:00 pilotlog.txt
[2026-03-20 20:00:34] -rw------- 1 boinc boinc  10524004 Mar 20 20:00 log.49177032._000264.job.log.1
[2026-03-20 20:00:34] -rw------- 1 boinc boinc       357 Mar 20 20:00 output.list
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc       620 Mar 20 20:00 runtime_log
[2026-03-20 20:00:34] -rw------- 1 boinc boinc  11735040 Mar 20 20:00 result.tar.gz
[2026-03-20 20:00:34] -rw------- 1 boinc boinc       662 Mar 20 20:00 yDsKDmuCNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmSntLDmCI9mhm.diag
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc      9419 Mar 20 20:00 runtime_log.err
[2026-03-20 20:00:34] -rw-r--r-- 1 boinc boinc     20957 Mar 20 20:00 stderr.txt
[2026-03-20 20:00:34] HITS file was successfully produced:
[2026-03-20 20:00:34] -rw------- 1 boinc boinc 235467641 Mar 20 19:58 shared/HITS.pool.root.1
[2026-03-20 20:00:34]  *** Contents of shared directory: ***
[2026-03-20 20:00:34] total 470764
[2026-03-20 20:00:34] -rw-r--r-- 2 boinc boinc 234230615 Mar 19 22:43 ATLAS.root_0
[2026-03-20 20:00:34] -rw-r--r-- 2 boinc boinc    597548 Mar 19 22:43 input.tar.gz
[2026-03-20 20:00:34] -rw-r--r-- 2 boinc boinc     15845 Mar 19 22:43 start_atlas.sh
[2026-03-20 20:00:34] -rw------- 1 boinc boinc 235467641 Mar 20 19:58 HITS.pool.root.1
[2026-03-20 20:00:34] -rw------- 1 boinc boinc  11735040 Mar 20 20:00 result.tar.gz
20:00:35 (277474): run_atlas exited; CPU time 150152.422937
20:00:35 (277474): called boinc_finish(0)

</stderr_txt>
]]>

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