Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:43:07 (3725357): wrapper (7.7.26015): starting
23:43:07 (3725357): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 23:43:07] Arguments: --nthreads 4
[2026-03-17 23:43:07] Threads: 4
[2026-03-17 23:43:07] Checking for CVMFS
[2026-03-17 23:43:07] No cvmfs_config command found, will try listing directly
[2026-03-17 23:43:07] CVMFS is ok
[2026-03-17 23:43:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 23:43:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 23:43:07] Further information can be found at the LHC@home message board.
[2026-03-17 23:43:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 23:43:07] Checking for apptainer binary...
[2026-03-17 23:43:07] which: no apptainer in ((null))
[2026-03-17 23:43:07] apptainer is not installed, using version from CVMFS
[2026-03-17 23:43:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 23:43:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot160/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-17 23:43:07] apptainer works
[2026-03-17 23:43:07] Set ATHENA_PROC_NUMBER=4
[2026-03-17 23:43:07] Set ATHENA_CORE_NUMBER=4
[2026-03-17 23:43:07] Starting ATLAS job with PandaID=7056908006
[2026-03-17 23:43:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot160/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 03:04:49]  *** The last 200 lines of the pilot log: ***
[2026-03-18 03:04:49] 2026-03-18 02:03:45,031 | INFO     | reading metadata from: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7056908006/jobReport.json
[2026-03-18 03:04:49] 2026-03-18 02:03:45,037 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot160/slots/0/workernode_map.json
[2026-03-18 03:04:49] 2026-03-18 02:03:45,037 | INFO     | this job has now completed (state=finished)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,037 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,037 | INFO     | log transfer has been attempted: DONE
[2026-03-18 03:04:49] 2026-03-18 02:03:45,037 | INFO     | job 7056908006 has finished - writing final server update
[2026-03-18 03:04:49] 2026-03-18 02:03:45,037 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1608851/.job.ad'
[2026-03-18 03:04:49] 2026-03-18 02:03:45,037 | INFO     | total number of processed events: 400 (read)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,066 | INFO     | using path: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7056908006/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,067 | INFO     | extracted standard info from prmon json
[2026-03-18 03:04:49] 2026-03-18 02:03:45,067 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 03:04:49] 2026-03-18 02:03:45,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 03:04:49] 2026-03-18 02:03:45,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 03:04:49] 2026-03-18 02:03:45,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 03:04:49] 2026-03-18 02:03:45,069 | INFO     | fitting pss+swap vs Time
[2026-03-18 03:04:49] 2026-03-18 02:03:45,069 | INFO     | sum of square deviations: 2370641658.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,070 | INFO     | sum of deviations: 23076193555.000004
[2026-03-18 03:04:49] 2026-03-18 02:03:45,070 | INFO     | mean x: 1773793408.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,070 | INFO     | mean y: 2329650.385786802
[2026-03-18 03:04:49] 2026-03-18 02:03:45,070 | INFO     | intersect: -17264050475.627796
[2026-03-18 03:04:49] 2026-03-18 02:03:45,070 | INFO     | chi2: 1.092489931074024
[2026-03-18 03:04:49] 2026-03-18 02:03:45,071 | INFO     | sum of square deviations: 2194675568.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,071 | INFO     | sum of deviations: 22367035554.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,071 | INFO     | mean x: 1773793255.5
[2026-03-18 03:04:49] 2026-03-18 02:03:45,071 | INFO     | mean y: 2329035.6875
[2026-03-18 03:04:49] 2026-03-18 02:03:45,071 | INFO     | intersect: -18075284525.83273
[2026-03-18 03:04:49] 2026-03-18 02:03:45,071 | INFO     | chi2: 1.0929838749316243
[2026-03-18 03:04:49] 2026-03-18 02:03:45,072 | INFO     | current chi2=1.0929838749316243 (change=-0.04521266911034882 %)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,072 | INFO     | right removable region: 191
[2026-03-18 03:04:49] 2026-03-18 02:03:45,072 | INFO     | sum of square deviations: 2194675568.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,072 | INFO     | sum of deviations: 3857258201.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,072 | INFO     | mean x: 1773793560.5
[2026-03-18 03:04:49] 2026-03-18 02:03:45,072 | INFO     | mean y: 2346037.4791666665
[2026-03-18 03:04:49] 2026-03-18 02:03:45,072 | INFO     | intersect: -3115189810.5891137
[2026-03-18 03:04:49] 2026-03-18 02:03:45,073 | INFO     | chi2: 0.0017075895118508406
[2026-03-18 03:04:49] 2026-03-18 02:03:45,073 | INFO     | current chi2=0.0017075895118508406 (change=99.84369745996908 %)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,073 | INFO     | sum of square deviations: 2027639878.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,073 | INFO     | sum of deviations: 3334810525.000001
[2026-03-18 03:04:49] 2026-03-18 02:03:45,073 | INFO     | mean x: 1773793713.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,073 | INFO     | mean y: 2346511.090909091
[2026-03-18 03:04:49] 2026-03-18 02:03:45,073 | INFO     | intersect: -2914969333.5381985
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | chi2: 0.001571500777929347
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | current chi2=0.001571500777929347 (change=7.969639833052633 %)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | left removable region: 20
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | sum of square deviations: 1550429070.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | sum of deviations: 3814225262.9999995
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | mean x: 1773793835.0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | mean y: 2345534.0643274854
[2026-03-18 03:04:49] 2026-03-18 02:03:45,074 | INFO     | intersect: -4361381506.225657
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | chi2: 0.00043263775032056017
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | current memory leak: 2.46 B/s (using 171 data points, chi2=0.00)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | could have reported an average CPU frequency of 3557 MHz (10 samples)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | ..............................
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . Timing measurements:
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . get job = 0 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . initial setup = 5 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . payload setup = 7 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . stage-in = 0 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . payload execution = 11996 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . stage-out = 0 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | . log creation = 0 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,075 | INFO     | ..............................
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | 
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | job summary report
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | --------------------------------------------------
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | PanDA job id: 7056908006
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | task id: 49176840
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | errors: (none)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | pilot state: finished 
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | transexitcode: 0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | exeerrorcode: 0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | exeerrordiag: 
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | exitcode: 0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | exitmsg: OK
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | cpuconsumptiontime: 45825 s
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | nevents: 400
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | neventsw: 0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | pid: 3735997
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | pgrp: 3735997
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | corecount: 4
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | event service: False
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | sizes: {0: 2280351, 11: 2280351, 12006: 2310203, 12007: 2310202, 12008: 2319280, 12010: 2319658}
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | --------------------------------------------------
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | 
[2026-03-18 03:04:49] 2026-03-18 02:03:45,248 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot160/slots/0
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,315 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 03:04:49] 2026-03-18 02:03:45,316 | INFO     | job 7056908006 has completed (purged errors)
[2026-03-18 03:04:49] 2026-03-18 02:03:45,316 | INFO     | overall cleanup function is called
[2026-03-18 03:04:49] 2026-03-18 02:03:45,709 | INFO     | PID=3729970 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-18 03:04:49] 2026-03-18 02:03:45,709 | INFO     | .. there are 46 such processes running
[2026-03-18 03:04:49] 2026-03-18 02:03:46,323 | INFO     | --- collectZombieJob: --- 10, [3735997]
[2026-03-18 03:04:49] 2026-03-18 02:03:46,323 | INFO     | zombie collector waiting for pid 3735997
[2026-03-18 03:04:49] 2026-03-18 02:03:46,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 03:04:49] 2026-03-18 02:03:46,323 | INFO     | collected zombie processes
[2026-03-18 03:04:49] 2026-03-18 02:03:46,323 | INFO     | will attempt to kill all subprocesses of pid=3735997
[2026-03-18 03:04:49] 2026-03-18 02:03:46,869 | INFO     | process IDs to be killed: [3735997] (in reverse order)
[2026-03-18 03:04:49] 2026-03-18 02:03:47,212 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 03:04:49] 2026-03-18 02:03:47,212 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 03:04:49] 2026-03-18 02:03:47,250 | INFO     | did not find any defunct processes belonging to 3735997
[2026-03-18 03:04:49] 2026-03-18 02:03:47,280 | INFO     | did not find any defunct processes belonging to 3735997
[2026-03-18 03:04:49] 2026-03-18 02:03:47,280 | INFO     | ready for new job
[2026-03-18 03:04:49] 2026-03-18 02:03:47,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 03:04:49] 2026-03-18 02:03:47,281 | INFO     | **************************************
[2026-03-18 03:04:49] 2026-03-18 02:03:47,282 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 03:04:49] 2026-03-18 02:03:47,282 | INFO     | **************************************
[2026-03-18 03:04:49] 2026-03-18 02:03:47,282 | INFO     | 
[2026-03-18 03:04:49] 2026-03-18 02:03:47,288 | INFO     | architecture information:
[2026-03-18 03:04:49] 2026-03-18 02:03:47,288 | INFO     | executing command: cat /etc/os-release
[2026-03-18 03:04:49] 2026-03-18 02:03:47,319 | INFO     | cat /etc/os-release:
[2026-03-18 03:04:49] NAME="CentOS Linux"
[2026-03-18 03:04:49] VERSION="7 (Core)"
[2026-03-18 03:04:49] ID="centos"
[2026-03-18 03:04:49] ID_LIKE="rhel fedora"
[2026-03-18 03:04:49] VERSION_ID="7"
[2026-03-18 03:04:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 03:04:49] ANSI_COLOR="0;31"
[2026-03-18 03:04:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 03:04:49] HOME_URL="https://www.centos.org/"
[2026-03-18 03:04:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 03:04:49] 
[2026-03-18 03:04:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 03:04:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 03:04:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 03:04:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 03:04:49] 
[2026-03-18 03:04:49] 2026-03-18 02:03:47,320 | INFO     | **************************************
[2026-03-18 03:04:49] 2026-03-18 02:03:47,822 | INFO     | executing command: df -mP /var/lib/boinc/var/slot160/slots/0
[2026-03-18 03:04:49] 2026-03-18 02:03:47,838 | INFO     | sufficient remaining disk space (20076036096 B)
[2026-03-18 03:04:49] 2026-03-18 02:03:47,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 03:04:49] 2026-03-18 02:03:47,838 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 03:04:49] 2026-03-18 02:03:47,839 | INFO     | update_server=False
[2026-03-18 03:04:49] 2026-03-18 02:03:47,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 03:04:49] 2026-03-18 02:03:48,167 | INFO     | all payload control threads have been joined
[2026-03-18 03:04:49] 2026-03-18 02:03:48,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 03:04:49] 2026-03-18 02:03:48,250 | INFO     | aborting loop
[2026-03-18 03:04:49] 2026-03-18 02:03:48,262 | INFO     | all job control threads have been joined
[2026-03-18 03:04:49] 2026-03-18 02:03:48,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 03:04:49] 2026-03-18 02:03:48,844 | INFO     | [job] retrieve thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:48,939 | INFO     | all data control threads have been joined
[2026-03-18 03:04:49] 2026-03-18 02:03:49,071 | INFO     | [payload] failed_post thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,172 | INFO     | [payload] control thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,255 | INFO     | [job] job monitor thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,267 | INFO     | [job] control thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,547 | INFO     | [payload] validate_post thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,792 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,880 | INFO     | [data] copytool_in thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,901 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,944 | INFO     | [data] control thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:49,952 | INFO     | [job] validate thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:50,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 03:04:49] 2026-03-18 02:03:50,292 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:50,364 | INFO     | [data] copytool_out thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:51,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 03:04:49] 2026-03-18 02:03:51,262 | INFO     | [job] queue monitor thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:55,035 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:03:58,479 | INFO     | job.realtimelogging is not enabled
[2026-03-18 03:04:49] 2026-03-18 02:03:59,484 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 03:04:49] 2026-03-18 02:04:18,444 | INFO     | PID=3729970 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 03:04:49] 2026-03-18 02:04:18,445 | INFO     | .. there are 46 such processes running
[2026-03-18 03:04:49] 2026-03-18 02:04:18,445 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 03:04:49] 2026-03-18 02:04:18,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 03:04:49] 2026-03-18 02:04:18,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 03:04:49] 2026-03-18 02:04:43,704 | INFO     | [monitor] cgroup control has ended
[2026-03-18 03:04:49] 2026-03-18 02:04:43,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22614132172608)>', '<ExcThread(monitor, started 22613893330688)>']
[2026-03-18 03:04:49] 2026-03-18 02:04:44,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 03:04:49] 2026-03-18 02:04:44,576 | INFO     | [monitor] control thread has ended
[2026-03-18 03:04:49] 2026-03-18 02:04:48,821 | INFO     | all workflow threads have been joined
[2026-03-18 03:04:49] 2026-03-18 02:04:48,821 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 03:04:49] 2026-03-18 02:04:48,821 | INFO     | traces error code: 0
[2026-03-18 03:04:49] 2026-03-18 02:04:48,821 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 03:04:49] 2026-03-18 02:04:49,038 [wrapper] ==== pilot stdout END ====
[2026-03-18 03:04:49] 2026-03-18 02:04:49,040 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 03:04:49] 2026-03-18 02:04:49,042 [wrapper] pilotpid: 3729970
[2026-03-18 03:04:49] 2026-03-18 02:04:49,043 [wrapper] Pilot exit status: 0
[2026-03-18 03:04:49] 2026-03-18 02:04:49,057 [wrapper] pandaids: 7056908006
[2026-03-18 03:04:49] 2026-03-18 02:04:49,199 [wrapper] cleanup supervisor_pilot  375151 3729971
[2026-03-18 03:04:49] 2026-03-18 02:04:49,202 [wrapper] Test setup, not cleaning
[2026-03-18 03:04:49] 2026-03-18 02:04:49,204 [wrapper] apfmon messages muted
[2026-03-18 03:04:49] 2026-03-18 02:04:49,211 [wrapper] ==== wrapper stdout END ====
[2026-03-18 03:04:49] 2026-03-18 02:04:49,216 [wrapper] ==== wrapper stderr END ====
[2026-03-18 03:04:49]  *** Error codes and diagnostics ***
[2026-03-18 03:04:49]     "exeErrorCode": 0,
[2026-03-18 03:04:49]     "exeErrorDiag": "",
[2026-03-18 03:04:49]     "pilotErrorCode": 0,
[2026-03-18 03:04:49]     "pilotErrorDiag": "",
[2026-03-18 03:04:49]  *** Listing of results directory ***
[2026-03-18 03:04:49] total 471128
[2026-03-18 03:04:49] -rwx------. 1 boinc boinc     36322 Mar 16 14:17 runpilot2-wrapper.sh
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc       100 Mar 17 23:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 03:04:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 23:43 run_atlas
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc       105 Mar 17 23:43 job.xml
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc      6709 Mar 17 23:43 init_data.xml
[2026-03-18 03:04:49] -rw-r--r--. 2 boinc boinc 238926228 Mar 17 23:43 EVNT.49135435._000006.pool.root.1
[2026-03-18 03:04:49] drwxrwx--x. 2 boinc boinc      4096 Mar 17 23:43 shared
[2026-03-18 03:04:49] -rw-r--r--. 2 boinc boinc    597559 Mar 17 23:43 input.tar.gz
[2026-03-18 03:04:49] -rw-r--r--. 2 boinc boinc     15845 Mar 17 23:43 start_atlas.sh
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc         0 Mar 17 23:43 boinc_lockfile
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc      2644 Mar 17 23:43 pandaJob.out
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc   1011333 Mar 17 23:43 agis_schedconf.cvmfs.json
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc       444 Mar 17 23:43 workernode_map.json
[2026-03-18 03:04:49] drwx------. 5 boinc boinc      4096 Mar 17 23:43 pilot3
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc 235491534 Mar 18 03:03 HITS.49176840._000134.pool.root.1
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc       529 Mar 18 03:03 boinc_task_state.xml
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc        95 Mar 18 03:03 pilot_heartbeat.json
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc      1035 Mar 18 03:03 memory_monitor_summary.json
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc   1511579 Mar 18 03:03 agis_ddmendpoints.agis.ALL.json
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc    366896 Mar 18 03:03 log.49176840._000134.job.log.tgz.1
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc      6353 Mar 18 03:03 heartbeat.json
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc      8192 Mar 18 03:04 boinc_mmap_file
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc        27 Mar 18 03:04 wrapper_checkpoint.txt
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc      4902 Mar 18 03:04 pilotlog.txt
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc   1677926 Mar 18 03:04 log.49176840._000134.job.log.1
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc       357 Mar 18 03:04 output.list
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc       620 Mar 18 03:04 runtime_log
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc   2058240 Mar 18 03:04 result.tar.gz
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc      9222 Mar 18 03:04 runtime_log.err
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc       665 Mar 18 03:04 NVEODmvzMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2twLDmCUf33m.diag
[2026-03-18 03:04:49] -rw-r--r--. 1 boinc boinc      8224 Mar 18 03:04 stderr.txt
[2026-03-18 03:04:49] HITS file was successfully produced:
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc 235491534 Mar 18 03:03 shared/HITS.pool.root.1
[2026-03-18 03:04:49]  *** Contents of shared directory: ***
[2026-03-18 03:04:49] total 465924
[2026-03-18 03:04:49] -rw-r--r--. 2 boinc boinc 238926228 Mar 17 23:43 ATLAS.root_0
[2026-03-18 03:04:49] -rw-r--r--. 2 boinc boinc    597559 Mar 17 23:43 input.tar.gz
[2026-03-18 03:04:49] -rw-r--r--. 2 boinc boinc     15845 Mar 17 23:43 start_atlas.sh
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc 235491534 Mar 18 03:03 HITS.pool.root.1
[2026-03-18 03:04:49] -rw-------. 1 boinc boinc   2058240 Mar 18 03:04 result.tar.gz
03:04:51 (3725357): run_atlas exited; CPU time 46388.159446
03:04:51 (3725357): called boinc_finish(0)

</stderr_txt>
]]>

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