Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:59:41 (3973509): wrapper (7.7.26015): starting
23:59:41 (3973509): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 23:59:41] Arguments: --nthreads 4
[2026-03-18 23:59:41] Threads: 4
[2026-03-18 23:59:41] Checking for CVMFS
[2026-03-18 23:59:41] No cvmfs_config command found, will try listing directly
[2026-03-18 23:59:41] CVMFS is ok
[2026-03-18 23:59:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 23:59:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 23:59:41] Further information can be found at the LHC@home message board.
[2026-03-18 23:59:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 23:59:41] Checking for apptainer binary...
[2026-03-18 23:59:41] which: no apptainer in ((null))
[2026-03-18 23:59:41] apptainer is not installed, using version from CVMFS
[2026-03-18 23:59:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 23:59:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-18 23:59:41] apptainer works
[2026-03-18 23:59:41] Set ATHENA_PROC_NUMBER=4
[2026-03-18 23:59:41] Set ATHENA_CORE_NUMBER=4
[2026-03-18 23:59:41] Starting ATLAS job with PandaID=7045950419
[2026-03-18 23:59:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 02:02:12]  *** The last 200 lines of the pilot log: ***
[2026-03-19 02:02:12] 2026-03-19 01:01:36,879 | INFO     | job 7045950419 has finished - writing final server update
[2026-03-19 02:02:12] 2026-03-19 01:01:36,879 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_198382/.job.ad'
[2026-03-19 02:02:12] 2026-03-19 01:01:36,879 | INFO     | total number of processed events: 400 (read)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,897 | INFO     | using path: /var/lib/boinc/var/slot92/slots/3/PanDA_Pilot-7045950419/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,897 | INFO     | extracted standard info from prmon json
[2026-03-19 02:02:12] 2026-03-19 01:01:36,898 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 02:02:12] 2026-03-19 01:01:36,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 02:02:12] 2026-03-19 01:01:36,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 02:02:12] 2026-03-19 01:01:36,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 02:02:12] 2026-03-19 01:01:36,899 | INFO     | fitting pss+swap vs Time
[2026-03-19 02:02:12] 2026-03-19 01:01:36,900 | INFO     | sum of square deviations: 535786790.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,900 | INFO     | sum of deviations: 6360160943.500001
[2026-03-19 02:02:12] 2026-03-19 01:01:36,900 | INFO     | mean x: 1773878446.5
[2026-03-19 02:02:12] 2026-03-19 01:01:36,900 | INFO     | mean y: 2306700.575
[2026-03-19 02:02:12] 2026-03-19 01:01:36,900 | INFO     | intersect: -21054861233.605976
[2026-03-19 02:02:12] 2026-03-19 01:01:36,900 | INFO     | chi2: 1.921498658509663
[2026-03-19 02:02:12] 2026-03-19 01:01:36,900 | INFO     | sum of square deviations: 471562330.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | sum of deviations: 13420758840.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | mean x: 1773878294.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | mean y: 2322857.843478261
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | intersect: -50482610481.264885
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | chi2: 1.1116957540767283
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | current chi2=1.1116957540767283 (change=42.144338787154155 %)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | sum of square deviations: 412686807.5
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | sum of deviations: 12749746731.5
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | mean x: 1773878141.5
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | mean y: 2321118.7545454544
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | intersect: -54800732009.29806
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | chi2: 1.1129649426629744
[2026-03-19 02:02:12] 2026-03-19 01:01:36,901 | INFO     | current chi2=1.1129649426629744 (change=-0.11416690057435815 %)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | right removable region: 109
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | sum of square deviations: 471562330.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | sum of deviations: -5522749558.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | mean x: 1773878599.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | mean y: 2334201.2260869564
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | intersect: 20777291455.705914
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | chi2: 0.8382649484345224
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | current chi2=0.8382649484345224 (change=56.37441927309538 %)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,902 | INFO     | sum of square deviations: 412686807.5
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | sum of deviations: -5707553938.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | mean x: 1773878751.5
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | mean y: 2334684.090909091
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | intersect: 24535487839.606667
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | chi2: 0.8388127982630523
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | current chi2=0.8388127982630523 (change=-0.06535521132704847 %)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | left removable region: 20
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | sum of square deviations: 218571540.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | sum of deviations: 564940886.0000001
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | mean x: 1773878721.0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | mean y: 2355279.415730337
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | intersect: -4582581150.543481
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | chi2: 0.0001007292659977086
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | current memory leak: 2.58 B/s (using 89 data points, chi2=0.00)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,903 | INFO     | could have reported an average CPU frequency of 3567 MHz (8 samples)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | ..............................
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . Timing measurements:
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . get job = 0 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . initial setup = 5 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . payload setup = 7 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . stage-in = 0 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . payload execution = 7277 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . stage-out = 0 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | . log creation = 0 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,904 | INFO     | ..............................
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | 
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | job summary report
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | --------------------------------------------------
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | PanDA job id: 7045950419
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | task id: 48998012
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | errors: (none)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | pilot state: finished 
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | transexitcode: 0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | exeerrorcode: 0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | exeerrordiag: 
[2026-03-19 02:02:12] 2026-03-19 01:01:36,954 | INFO     | exitcode: 0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | exitmsg: OK
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | cpuconsumptiontime: 27983 s
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | nevents: 400
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | neventsw: 0
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | pid: 3984891
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | pgrp: 3984891
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | corecount: 4
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | event service: False
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | sizes: {0: 2280012, 1: 2280274, 11: 2280302, 7288: 2307656, 7289: 2316732, 7292: 2316870}
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | --------------------------------------------------
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | 
[2026-03-19 02:02:12] 2026-03-19 01:01:36,955 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/3
[2026-03-19 02:02:12] 2026-03-19 01:01:36,973 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,973 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | job 7045950419 has completed (purged errors)
[2026-03-19 02:02:12] 2026-03-19 01:01:36,974 | INFO     | overall cleanup function is called
[2026-03-19 02:02:12] 2026-03-19 01:01:37,981 | INFO     | --- collectZombieJob: --- 10, [3984891]
[2026-03-19 02:02:12] 2026-03-19 01:01:37,982 | INFO     | zombie collector waiting for pid 3984891
[2026-03-19 02:02:12] 2026-03-19 01:01:37,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 02:02:12] 2026-03-19 01:01:37,982 | INFO     | collected zombie processes
[2026-03-19 02:02:12] 2026-03-19 01:01:37,982 | INFO     | will attempt to kill all subprocesses of pid=3984891
[2026-03-19 02:02:12] 2026-03-19 01:01:38,459 | INFO     | process IDs to be killed: [3984891] (in reverse order)
[2026-03-19 02:02:12] 2026-03-19 01:01:38,678 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 02:02:12] 2026-03-19 01:01:38,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 02:02:12] 2026-03-19 01:01:38,710 | INFO     | did not find any defunct processes belonging to 3984891
[2026-03-19 02:02:12] 2026-03-19 01:01:38,739 | INFO     | did not find any defunct processes belonging to 3984891
[2026-03-19 02:02:12] 2026-03-19 01:01:38,739 | INFO     | ready for new job
[2026-03-19 02:02:12] 2026-03-19 01:01:38,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 02:02:12] 2026-03-19 01:01:38,741 | INFO     | **************************************
[2026-03-19 02:02:12] 2026-03-19 01:01:38,741 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-19 02:02:12] 2026-03-19 01:01:38,741 | INFO     | **************************************
[2026-03-19 02:02:12] 2026-03-19 01:01:38,741 | INFO     | 
[2026-03-19 02:02:12] 2026-03-19 01:01:38,746 | INFO     | architecture information:
[2026-03-19 02:02:12] 2026-03-19 01:01:38,747 | INFO     | executing command: cat /etc/os-release
[2026-03-19 02:02:12] 2026-03-19 01:01:38,759 | INFO     | cat /etc/os-release:
[2026-03-19 02:02:12] NAME="CentOS Linux"
[2026-03-19 02:02:12] VERSION="7 (Core)"
[2026-03-19 02:02:12] ID="centos"
[2026-03-19 02:02:12] ID_LIKE="rhel fedora"
[2026-03-19 02:02:12] VERSION_ID="7"
[2026-03-19 02:02:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 02:02:12] ANSI_COLOR="0;31"
[2026-03-19 02:02:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 02:02:12] HOME_URL="https://www.centos.org/"
[2026-03-19 02:02:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 02:02:12] 
[2026-03-19 02:02:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 02:02:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 02:02:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 02:02:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 02:02:12] 
[2026-03-19 02:02:12] 2026-03-19 01:01:38,760 | INFO     | **************************************
[2026-03-19 02:02:12] 2026-03-19 01:01:39,263 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/3
[2026-03-19 02:02:12] 2026-03-19 01:01:39,277 | INFO     | sufficient remaining disk space (14534311936 B)
[2026-03-19 02:02:12] 2026-03-19 01:01:39,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 02:02:12] 2026-03-19 01:01:39,277 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 02:02:12] 2026-03-19 01:01:39,277 | INFO     | update_server=False
[2026-03-19 02:02:12] 2026-03-19 01:01:39,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 02:02:12] 2026-03-19 01:01:39,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 02:02:12] 2026-03-19 01:01:39,838 | INFO     | all payload control threads have been joined
[2026-03-19 02:02:12] 2026-03-19 01:01:40,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:02:12] 2026-03-19 01:01:40,216 | INFO     | aborting loop
[2026-03-19 02:02:12] 2026-03-19 01:01:40,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 02:02:12] 2026-03-19 01:01:40,283 | INFO     | [job] retrieve thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:40,311 | INFO     | all data control threads have been joined
[2026-03-19 02:02:12] 2026-03-19 01:01:40,434 | INFO     | [payload] failed_post thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:40,575 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:40,632 | INFO     | [job] validate thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:40,710 | INFO     | all job control threads have been joined
[2026-03-19 02:02:12] 2026-03-19 01:01:40,843 | INFO     | [payload] control thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:40,973 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:40,992 | INFO     | [payload] validate_post thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:41,221 | INFO     | [job] job monitor thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:41,316 | INFO     | [data] control thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:41,371 | INFO     | [data] copytool_in thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:41,572 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:41,685 | INFO     | [data] copytool_out thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:41,715 | INFO     | [job] control thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:41,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 02:02:12] 2026-03-19 01:01:42,970 | INFO     | [job] queue monitor thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:44,237 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:01:50,172 | INFO     | job.realtimelogging is not enabled
[2026-03-19 02:02:12] 2026-03-19 01:01:51,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 02:02:12] 2026-03-19 01:02:06,052 | INFO     | [monitor] cgroup control has ended
[2026-03-19 02:02:12] 2026-03-19 01:02:06,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22362218755904)>', '<ExcThread(monitor, started 22361968727808)>']
[2026-03-19 02:02:12] 2026-03-19 01:02:09,087 | INFO     | PID=3978075 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 02:02:12] 2026-03-19 01:02:09,087 | INFO     | .. there are 46 such processes running
[2026-03-19 02:02:12] 2026-03-19 01:02:09,088 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 02:02:12] 2026-03-19 01:02:09,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 02:02:12] 2026-03-19 01:02:09,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 02:02:12] 2026-03-19 01:02:09,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 02:02:12] 2026-03-19 01:02:09,088 | INFO     | [monitor] control thread has ended
[2026-03-19 02:02:12] 2026-03-19 01:02:11,979 | INFO     | all workflow threads have been joined
[2026-03-19 02:02:12] 2026-03-19 01:02:11,980 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 02:02:12] 2026-03-19 01:02:11,980 | INFO     | traces error code: 0
[2026-03-19 02:02:12] 2026-03-19 01:02:11,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 02:02:12] 2026-03-19 01:02:12,192 [wrapper] ==== pilot stdout END ====
[2026-03-19 02:02:12] 2026-03-19 01:02:12,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 02:02:12] 2026-03-19 01:02:12,197 [wrapper] pilotpid: 3978075
[2026-03-19 02:02:12] 2026-03-19 01:02:12,198 [wrapper] Pilot exit status: 0
[2026-03-19 02:02:12] 2026-03-19 01:02:12,208 [wrapper] pandaids: 7045950419
[2026-03-19 02:02:12] 2026-03-19 01:02:12,343 [wrapper] cleanup supervisor_pilot  260608 3978076
[2026-03-19 02:02:12] 2026-03-19 01:02:12,348 [wrapper] Test setup, not cleaning
[2026-03-19 02:02:12] 2026-03-19 01:02:12,350 [wrapper] apfmon messages muted
[2026-03-19 02:02:12] 2026-03-19 01:02:12,351 [wrapper] ==== wrapper stdout END ====
[2026-03-19 02:02:12] 2026-03-19 01:02:12,352 [wrapper] ==== wrapper stderr END ====
[2026-03-19 02:02:12]  *** Error codes and diagnostics ***
[2026-03-19 02:02:12]     "exeErrorCode": 0,
[2026-03-19 02:02:12]     "exeErrorDiag": "",
[2026-03-19 02:02:12]     "pilotErrorCode": 0,
[2026-03-19 02:02:12]     "pilotErrorDiag": "",
[2026-03-19 02:02:12]  *** Listing of results directory ***
[2026-03-19 02:02:12] total 598888
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc    584627 Mar  8 08:59 pilot3.tar.gz
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc      5111 Mar  8 09:56 queuedata.json
[2026-03-19 02:02:12] -rwx------. 1 boinc boinc     36322 Mar  8 09:56 runpilot2-wrapper.sh
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc       100 Mar 18 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 02:02:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 23:59 run_atlas
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc       105 Mar 18 23:59 job.xml
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc      6706 Mar 18 23:59 init_data.xml
[2026-03-19 02:02:12] -rw-r--r--. 2 boinc boinc 341410284 Mar 18 23:59 EVNT.48998009._000040.pool.root.1
[2026-03-19 02:02:12] -rw-r--r--. 2 boinc boinc     15845 Mar 18 23:59 start_atlas.sh
[2026-03-19 02:02:12] drwxrwx--x. 2 boinc boinc      4096 Mar 18 23:59 shared
[2026-03-19 02:02:12] -rw-r--r--. 2 boinc boinc    597967 Mar 18 23:59 input.tar.gz
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc         0 Mar 18 23:59 boinc_lockfile
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc      2585 Mar 18 23:59 pandaJob.out
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc   1010342 Mar 18 23:59 agis_schedconf.cvmfs.json
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc   1511579 Mar 18 23:59 agis_ddmendpoints.agis.ALL.json
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc       442 Mar 18 23:59 workernode_map.json
[2026-03-19 02:02:12] drwx------. 5 boinc boinc      4096 Mar 18 23:59 pilot3
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc 265197808 Mar 19 02:01 HITS.48998012._000743.pool.root.1
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc       529 Mar 19 02:01 boinc_task_state.xml
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc      1025 Mar 19 02:01 memory_monitor_summary.json
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc    311299 Mar 19 02:01 log.48998012._000743.job.log.tgz.1
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc      6339 Mar 19 02:01 heartbeat.json
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc        27 Mar 19 02:02 wrapper_checkpoint.txt
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc      8192 Mar 19 02:02 boinc_mmap_file
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc        95 Mar 19 02:02 pilot_heartbeat.json
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc      4901 Mar 19 02:02 pilotlog.txt
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc   1044188 Mar 19 02:02 log.48998012._000743.job.log.1
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc       357 Mar 19 02:02 output.list
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc       620 Mar 19 02:02 runtime_log
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc   1372160 Mar 19 02:02 result.tar.gz
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc       663 Mar 19 02:02 zRRNDm36OJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmaHWLDmZ2hUEn.diag
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc      9204 Mar 19 02:02 runtime_log.err
[2026-03-19 02:02:12] -rw-r--r--. 1 boinc boinc     20855 Mar 19 02:02 stderr.txt
[2026-03-19 02:02:12] HITS file was successfully produced:
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc 265197808 Mar 19 02:01 shared/HITS.pool.root.1
[2026-03-19 02:02:12]  *** Contents of shared directory: ***
[2026-03-19 02:02:12] total 594344
[2026-03-19 02:02:12] -rw-r--r--. 2 boinc boinc 341410284 Mar 18 23:59 ATLAS.root_0
[2026-03-19 02:02:12] -rw-r--r--. 2 boinc boinc     15845 Mar 18 23:59 start_atlas.sh
[2026-03-19 02:02:12] -rw-r--r--. 2 boinc boinc    597967 Mar 18 23:59 input.tar.gz
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc 265197808 Mar 19 02:01 HITS.pool.root.1
[2026-03-19 02:02:12] -rw-------. 1 boinc boinc   1372160 Mar 19 02:02 result.tar.gz
02:02:14 (3973509): run_atlas exited; CPU time 28336.194845
02:02:14 (3973509): called boinc_finish(0)

</stderr_txt>
]]>

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