Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:25 (2653246): wrapper (7.7.26015): starting
02:09:25 (2653246): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 02:09:25] Arguments: --nthreads 4
[2026-03-19 02:09:25] Threads: 4
[2026-03-19 02:09:25] Checking for CVMFS
[2026-03-19 02:09:25] No cvmfs_config command found, will try listing directly
[2026-03-19 02:09:25] CVMFS is ok
[2026-03-19 02:09:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:09:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:09:25] Further information can be found at the LHC@home message board.
[2026-03-19 02:09:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:09:25] Checking for apptainer binary...
[2026-03-19 02:09:25] which: no apptainer in ((null))
[2026-03-19 02:09:25] apptainer is not installed, using version from CVMFS
[2026-03-19 02:09:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:09:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-19 02:09:25] apptainer works
[2026-03-19 02:09:25] Set ATHENA_PROC_NUMBER=4
[2026-03-19 02:09:25] Set ATHENA_CORE_NUMBER=4
[2026-03-19 02:09:25] Starting ATLAS job with PandaID=7056909307
[2026-03-19 02:09:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 06:02:13]  *** The last 200 lines of the pilot log: ***
[2026-03-19 06:02:13] 2026-03-19 04:54:29,020 | INFO     | sum of square deviations: 3124858590.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,021 | INFO     | sum of deviations: 9010772166.500002
[2026-03-19 06:02:13] 2026-03-19 04:54:29,021 | INFO     | mean x: 1773889464.5
[2026-03-19 06:02:13] 2026-03-19 04:54:29,022 | INFO     | mean y: 2344524.1805555555
[2026-03-19 06:02:13] 2026-03-19 04:54:29,022 | INFO     | intersect: -5112803362.612041
[2026-03-19 06:02:13] 2026-03-19 04:54:29,022 | INFO     | chi2: 0.0024653303931814795
[2026-03-19 06:02:13] 2026-03-19 04:54:29,022 | INFO     | current chi2=0.0024653303931814795 (change=99.77495575425438 %)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,022 | INFO     | sum of square deviations: 2912836010.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,023 | INFO     | sum of deviations: 7247264271.000002
[2026-03-19 06:02:13] 2026-03-19 04:54:29,023 | INFO     | mean x: 1773889617.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,023 | INFO     | mean y: 2345790.9857819905
[2026-03-19 06:02:13] 2026-03-19 04:54:29,023 | INFO     | intersect: -4411169696.273653
[2026-03-19 06:02:13] 2026-03-19 04:54:29,023 | INFO     | chi2: 0.0011982905909359372
[2026-03-19 06:02:13] 2026-03-19 04:54:29,023 | INFO     | current chi2=0.0011982905909359372 (change=51.39432044280453 %)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,023 | INFO     | sum of square deviations: 2710627567.5
[2026-03-19 06:02:13] 2026-03-19 04:54:29,024 | INFO     | sum of deviations: 6009855328.499999
[2026-03-19 06:02:13] 2026-03-19 04:54:29,024 | INFO     | mean x: 1773889769.5
[2026-03-19 06:02:13] 2026-03-19 04:54:29,024 | INFO     | mean y: 2346723.3932038834
[2026-03-19 06:02:13] 2026-03-19 04:54:29,024 | INFO     | intersect: -3930624744.6250453
[2026-03-19 06:02:13] 2026-03-19 04:54:29,024 | INFO     | chi2: 0.0006642518350660131
[2026-03-19 06:02:13] 2026-03-19 04:54:29,024 | INFO     | current chi2=0.0006642518350660131 (change=44.56671527837063 %)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,024 | INFO     | sum of square deviations: 2518000700.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,025 | INFO     | sum of deviations: 5042431288.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,025 | INFO     | mean x: 1773889922.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,025 | INFO     | mean y: 2347488.6019900497
[2026-03-19 06:02:13] 2026-03-19 04:54:29,025 | INFO     | intersect: -3549962105.3392186
[2026-03-19 06:02:13] 2026-03-19 04:54:29,025 | INFO     | chi2: 0.0003594714212233034
[2026-03-19 06:02:13] 2026-03-19 04:54:29,025 | INFO     | current chi2=0.0003594714212233034 (change=45.883262605126376 %)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,026 | INFO     | sum of square deviations: 2334722845.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,026 | INFO     | sum of deviations: 4491805150.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,026 | INFO     | mean x: 1773890074.5
[2026-03-19 06:02:13] 2026-03-19 04:54:29,026 | INFO     | mean y: 2347946.7346938774
[2026-03-19 06:02:13] 2026-03-19 04:54:29,026 | INFO     | intersect: -3410463380.8440976
[2026-03-19 06:02:13] 2026-03-19 04:54:29,026 | INFO     | chi2: 0.00032283528882492773
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | current chi2=0.00032283528882492773 (change=10.191667608429249 %)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | left removable region: 50
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | sum of square deviations: 1392881930.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | sum of deviations: 2498228098.9999995
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | mean x: 1773890654.0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | mean y: 2349569.096969697
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | intersect: -3179243486.946399
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | chi2: 0.00024571408033173786
[2026-03-19 06:02:13] 2026-03-19 04:54:29,027 | INFO     | current memory leak: 1.79 B/s (using 165 data points, chi2=0.00)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | could have reported an average CPU frequency of 3532 MHz (11 samples)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | ..............................
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . Timing measurements:
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . get job = 0 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . initial setup = 5 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . payload setup = 7 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . stage-in = 0 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . payload execution = 13464 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . stage-out = 0 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | . log creation = 0 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,028 | INFO     | ..............................
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | 
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | job summary report
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | --------------------------------------------------
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | PanDA job id: 7056909307
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | task id: 49176925
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | errors: (none)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | pilot state: finished 
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | transexitcode: 0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | exeerrorcode: 0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | exeerrordiag: 
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | exitcode: 0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | exitmsg: OK
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | cpuconsumptiontime: 52428 s
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | nevents: 400
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | neventsw: 0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | pid: 2678677
[2026-03-19 06:02:13] 2026-03-19 04:54:29,104 | INFO     | pgrp: 2678677
[2026-03-19 06:02:13] 2026-03-19 04:54:29,105 | INFO     | corecount: 4
[2026-03-19 06:02:13] 2026-03-19 04:54:29,105 | INFO     | event service: False
[2026-03-19 06:02:13] 2026-03-19 04:54:29,105 | INFO     | sizes: {0: 2280100, 1: 2280390, 11: 2280390, 13476: 2310681, 13477: 2319703, 13478: 2319759, 13479: 2320081}
[2026-03-19 06:02:13] 2026-03-19 04:54:29,105 | INFO     | --------------------------------------------------
[2026-03-19 06:02:13] 2026-03-19 04:54:29,105 | INFO     | 
[2026-03-19 06:02:13] 2026-03-19 04:54:29,105 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot196/slots/0
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,122 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 06:02:13] 2026-03-19 04:54:29,122 | INFO     | job 7056909307 has completed (purged errors)
[2026-03-19 06:02:13] 2026-03-19 04:54:29,122 | INFO     | overall cleanup function is called
[2026-03-19 06:02:13] 2026-03-19 04:54:30,129 | INFO     | --- collectZombieJob: --- 10, [2678677]
[2026-03-19 06:02:13] 2026-03-19 04:54:30,129 | INFO     | zombie collector waiting for pid 2678677
[2026-03-19 06:02:13] 2026-03-19 04:54:30,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 06:02:13] 2026-03-19 04:54:30,129 | INFO     | collected zombie processes
[2026-03-19 06:02:13] 2026-03-19 04:54:30,129 | INFO     | will attempt to kill all subprocesses of pid=2678677
[2026-03-19 06:02:13] 2026-03-19 04:54:30,635 | INFO     | process IDs to be killed: [2678677] (in reverse order)
[2026-03-19 06:02:13] 2026-03-19 04:54:30,867 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 06:02:13] 2026-03-19 04:54:30,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 06:02:13] 2026-03-19 04:54:30,899 | INFO     | did not find any defunct processes belonging to 2678677
[2026-03-19 06:02:13] 2026-03-19 04:54:30,930 | INFO     | did not find any defunct processes belonging to 2678677
[2026-03-19 06:02:13] 2026-03-19 04:54:30,930 | INFO     | ready for new job
[2026-03-19 06:02:13] 2026-03-19 04:54:30,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 06:02:13] 2026-03-19 04:54:30,932 | INFO     | **************************************
[2026-03-19 06:02:13] 2026-03-19 04:54:30,932 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 06:02:13] 2026-03-19 04:54:30,932 | INFO     | **************************************
[2026-03-19 06:02:13] 2026-03-19 04:54:30,932 | INFO     | 
[2026-03-19 06:02:13] 2026-03-19 04:54:30,938 | INFO     | architecture information:
[2026-03-19 06:02:13] 2026-03-19 04:54:30,938 | INFO     | executing command: cat /etc/os-release
[2026-03-19 06:02:13] 2026-03-19 04:54:30,951 | INFO     | cat /etc/os-release:
[2026-03-19 06:02:13] NAME="CentOS Linux"
[2026-03-19 06:02:13] VERSION="7 (Core)"
[2026-03-19 06:02:13] ID="centos"
[2026-03-19 06:02:13] ID_LIKE="rhel fedora"
[2026-03-19 06:02:13] VERSION_ID="7"
[2026-03-19 06:02:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 06:02:13] ANSI_COLOR="0;31"
[2026-03-19 06:02:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 06:02:13] HOME_URL="https://www.centos.org/"
[2026-03-19 06:02:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 06:02:13] 
[2026-03-19 06:02:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 06:02:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 06:02:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 06:02:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 06:02:13] 
[2026-03-19 06:02:13] 2026-03-19 04:54:30,951 | INFO     | **************************************
[2026-03-19 06:02:13] 2026-03-19 04:54:31,454 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-19 06:02:13] 2026-03-19 04:54:31,467 | INFO     | sufficient remaining disk space (28848422912 B)
[2026-03-19 06:02:13] 2026-03-19 04:54:31,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 06:02:13] 2026-03-19 04:54:31,467 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 06:02:13] 2026-03-19 04:54:31,467 | INFO     | update_server=False
[2026-03-19 06:02:13] 2026-03-19 04:54:31,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 06:02:13] 2026-03-19 04:54:31,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 06:02:13] 2026-03-19 04:54:31,731 | WARNING  | process 2678677 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 06:02:13] 2026-03-19 04:54:31,789 | INFO     | all data control threads have been joined
[2026-03-19 06:02:13] 2026-03-19 04:54:32,084 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 06:02:13] 2026-03-19 04:54:32,085 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7056909307/payload.stdout) since it has not been created yet
[2026-03-19 06:02:13] 2026-03-19 04:54:32,085 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-19 06:02:13] 2026-03-19 04:54:32,102 | INFO     | sufficient remaining disk space (28848422912 B)
[2026-03-19 06:02:13] 2026-03-19 04:54:32,102 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-19 06:02:13] 2026-03-19 04:54:32,102 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7056909307/HITS.49176925._000053.pool.root.1 since it does not exist
[2026-03-19 06:02:13] 2026-03-19 04:54:32,472 | INFO     | [job] retrieve thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:32,554 | INFO     | all job control threads have been joined
[2026-03-19 06:02:13] 2026-03-19 04:54:32,589 | INFO     | number of running child processes to parent process 2678677: 1
[2026-03-19 06:02:13] 2026-03-19 04:54:32,589 | INFO     | maximum number of monitored processes: 6
[2026-03-19 06:02:13] 2026-03-19 04:54:32,589 | INFO     | aborting job monitoring since job object (job id=7056909307) has expired
[2026-03-19 06:02:13] 2026-03-19 04:54:32,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:02:13] 2026-03-19 04:54:32,589 | INFO     | will abort loop
[2026-03-19 06:02:13] 2026-03-19 04:54:32,626 | INFO     | all payload control threads have been joined
[2026-03-19 06:02:13] 2026-03-19 04:54:32,794 | INFO     | [data] control thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:32,901 | INFO     | [job] validate thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,035 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,195 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,225 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,336 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,475 | INFO     | [data] copytool_out thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,488 | INFO     | [payload] validate_post thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,559 | INFO     | [job] control thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,594 | INFO     | [job] job monitor thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,631 | INFO     | [payload] control thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,733 | INFO     | [data] copytool_in thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,766 | INFO     | [payload] failed_post thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:33,833 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-03-19 06:02:13] 2026-03-19 04:54:34,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 06:02:13] 2026-03-19 04:54:34,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 06:02:13] 2026-03-19 04:54:35,084 | INFO     | [job] queue monitor thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:54:38,282 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 06:02:13] 2026-03-19 04:55:01,478 | INFO     | PID=2658425 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 06:02:13] 2026-03-19 04:55:01,478 | INFO     | .. there are 41 such processes running
[2026-03-19 06:02:13] 2026-03-19 04:55:01,479 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 06:02:13] 2026-03-19 04:55:01,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 06:02:13] 2026-03-19 04:55:01,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 06:02:13] 2026-03-19 04:55:01,523 | INFO     | [monitor] cgroup control has ended
[2026-03-19 06:02:13] 2026-03-19 04:55:02,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22738260956992)>', '<ExcThread(monitor, started 22737955313408)>']
[2026-03-19 06:02:13] 2026-03-19 04:55:02,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 06:02:13] 2026-03-19 04:55:02,484 | INFO     | [monitor] control thread has ended
[2026-03-19 06:02:13] 2026-03-19 04:55:07,288 | INFO     | all workflow threads have been joined
[2026-03-19 06:02:13] 2026-03-19 04:55:07,288 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 06:02:13] 2026-03-19 04:55:07,288 | INFO     | traces error code: 0
[2026-03-19 06:02:13] 2026-03-19 04:55:07,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 06:02:13] 2026-03-19 04:55:07,532 [wrapper] ==== pilot stdout END ====
[2026-03-19 06:02:13] 2026-03-19 04:55:07,534 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 06:02:13] 2026-03-19 04:55:07,536 [wrapper] pilotpid: 2658425
[2026-03-19 06:02:13] 2026-03-19 04:55:07,538 [wrapper] Pilot exit status: 0
[2026-03-19 06:02:13] 2026-03-19 04:55:07,545 [wrapper] pandaids: 7056909307
[2026-03-19 06:02:13] 2026-03-19 04:55:07,692 [wrapper] cleanup supervisor_pilot 3697989 2658426
[2026-03-19 06:02:13] 2026-03-19 04:55:07,694 [wrapper] Test setup, not cleaning
[2026-03-19 06:02:13] 2026-03-19 04:55:07,695 [wrapper] apfmon messages muted
[2026-03-19 06:02:13] 2026-03-19 04:55:07,697 [wrapper] ==== wrapper stdout END ====
[2026-03-19 06:02:13] 2026-03-19 04:55:07,698 [wrapper] ==== wrapper stderr END ====
[2026-03-19 06:02:13]  *** Error codes and diagnostics ***
[2026-03-19 06:02:13]     "exeErrorCode": 0,
[2026-03-19 06:02:13]     "exeErrorDiag": "",
[2026-03-19 06:02:13]     "pilotErrorCode": 0,
[2026-03-19 06:02:13]     "pilotErrorDiag": "",
[2026-03-19 06:02:13]  *** Listing of results directory ***
[2026-03-19 06:02:13] total 485332
[2026-03-19 06:02:13] -rwx------. 1 boinc boinc     36322 Mar 16 14:17 runpilot2-wrapper.sh
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc       100 Mar 19 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 06:02:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 02:09 run_atlas
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc       105 Mar 19 02:09 job.xml
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc      6708 Mar 19 02:09 init_data.xml
[2026-03-19 06:02:13] -rw-r--r--. 2 boinc boinc 244175426 Mar 19 02:09 EVNT.49135756._000003.pool.root.1
[2026-03-19 06:02:13] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:09 start_atlas.sh
[2026-03-19 06:02:13] drwxrwx--x. 2 boinc boinc      4096 Mar 19 02:09 shared
[2026-03-19 06:02:13] -rw-r--r--. 2 boinc boinc    597561 Mar 19 02:09 input.tar.gz
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc         0 Mar 19 02:09 boinc_lockfile
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc      2668 Mar 19 02:09 pandaJob.out
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc   1010422 Mar 19 02:09 agis_schedconf.cvmfs.json
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc       445 Mar 19 02:09 workernode_map.json
[2026-03-19 06:02:13] drwx------. 5 boinc boinc      4096 Mar 19 02:09 pilot3
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc 244306445 Mar 19 05:53 HITS.49176925._000053.pool.root.1
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc       529 Mar 19 05:53 boinc_task_state.xml
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc      1028 Mar 19 05:54 memory_monitor_summary.json
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc   1511579 Mar 19 05:54 agis_ddmendpoints.agis.ALL.json
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc    381626 Mar 19 05:54 log.49176925._000053.job.log.tgz.1
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc      6347 Mar 19 05:54 heartbeat.json
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc        95 Mar 19 05:55 pilot_heartbeat.json
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc      6040 Mar 19 05:55 pilotlog.txt
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc   1893417 Mar 19 05:55 log.49176925._000053.job.log.1
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc       357 Mar 19 05:55 output.list
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc       620 Mar 19 05:55 runtime_log
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc   2293760 Mar 19 05:55 result.tar.gz
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc      9222 Mar 19 05:55 runtime_log.err
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc       665 Mar 19 05:55 VAQKDmE0MM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNitLDmgWWoEn.diag
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc        27 Mar 19 06:02 wrapper_checkpoint.txt
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc      8192 Mar 19 06:02 boinc_mmap_file
[2026-03-19 06:02:13] -rw-r--r--. 1 boinc boinc     21239 Mar 19 06:02 stderr.txt
[2026-03-19 06:02:13] HITS file was successfully produced:
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc 244306445 Mar 19 05:53 shared/HITS.pool.root.1
[2026-03-19 06:02:13]  *** Contents of shared directory: ***
[2026-03-19 06:02:13] total 479888
[2026-03-19 06:02:13] -rw-r--r--. 2 boinc boinc 244175426 Mar 19 02:09 ATLAS.root_0
[2026-03-19 06:02:13] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:09 start_atlas.sh
[2026-03-19 06:02:13] -rw-r--r--. 2 boinc boinc    597561 Mar 19 02:09 input.tar.gz
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc 244306445 Mar 19 05:53 HITS.pool.root.1
[2026-03-19 06:02:13] -rw-------. 1 boinc boinc   2293760 Mar 19 05:55 result.tar.gz
06:02:14 (2653246): run_atlas exited; CPU time 53106.538192
06:02:14 (2653246): called boinc_finish(0)

</stderr_txt>
]]>

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