Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:47:10 (95587): wrapper (7.7.26015): starting
15:47:10 (95587): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 15:47:10] Arguments: --nthreads 4
[2026-03-18 15:47:10] Threads: 4
[2026-03-18 15:47:10] Checking for CVMFS
[2026-03-18 15:47:10] No cvmfs_config command found, will try listing directly
[2026-03-18 15:47:10] CVMFS is ok
[2026-03-18 15:47:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 15:47:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 15:47:10] Further information can be found at the LHC@home message board.
[2026-03-18 15:47:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 15:47:10] Checking for apptainer binary...
[2026-03-18 15:47:10] which: no apptainer in ((null))
[2026-03-18 15:47:10] apptainer is not installed, using version from CVMFS
[2026-03-18 15:47:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 15:47:10] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-18 15:47:10] apptainer works
[2026-03-18 15:47:10] Set ATHENA_PROC_NUMBER=4
[2026-03-18 15:47:10] Set ATHENA_CORE_NUMBER=4
[2026-03-18 15:47:10] Starting ATLAS job with PandaID=7056904316
[2026-03-18 15:47:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 19:06:59]  *** The last 200 lines of the pilot log: ***
[2026-03-18 19:06:59] 2026-03-18 18:06:10,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,012 | INFO     | job 7056904316 has state=finished
[2026-03-18 19:06:59] 2026-03-18 18:06:11,012 | INFO     | preparing for final server update for job 7056904316 in state='finished'
[2026-03-18 19:06:59] 2026-03-18 18:06:11,012 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7056904316/jobReport.json
[2026-03-18 19:06:59] 2026-03-18 18:06:11,014 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/3/workernode_map.json
[2026-03-18 19:06:59] 2026-03-18 18:06:11,014 | INFO     | this job has now completed (state=finished)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,014 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,014 | INFO     | log transfer has been attempted: DONE
[2026-03-18 19:06:59] 2026-03-18 18:06:11,014 | INFO     | job 7056904316 has finished - writing final server update
[2026-03-18 19:06:59] 2026-03-18 18:06:11,014 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3499571/.job.ad'
[2026-03-18 19:06:59] 2026-03-18 18:06:11,014 | INFO     | total number of processed events: 400 (read)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,033 | INFO     | using path: /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7056904316/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,034 | INFO     | extracted standard info from prmon json
[2026-03-18 19:06:59] 2026-03-18 18:06:11,034 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 19:06:59] 2026-03-18 18:06:11,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 19:06:59] 2026-03-18 18:06:11,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 19:06:59] 2026-03-18 18:06:11,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 19:06:59] 2026-03-18 18:06:11,037 | INFO     | fitting pss+swap vs Time
[2026-03-18 19:06:59] 2026-03-18 18:06:11,037 | INFO     | sum of square deviations: 2299168690.0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,038 | INFO     | sum of deviations: 15598207642.0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,038 | INFO     | mean x: 1773851202.0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,038 | INFO     | mean y: 2339053.230769231
[2026-03-18 19:06:59] 2026-03-18 18:06:11,038 | INFO     | intersect: -12031966865.752184
[2026-03-18 19:06:59] 2026-03-18 18:06:11,038 | INFO     | chi2: 1.0991446568623326
[2026-03-18 19:06:59] 2026-03-18 18:06:11,038 | INFO     | sum of square deviations: 2126802667.5
[2026-03-18 19:06:59] 2026-03-18 18:06:11,039 | INFO     | sum of deviations: 15076778940.500002
[2026-03-18 19:06:59] 2026-03-18 18:06:11,039 | INFO     | mean x: 1773851049.5
[2026-03-18 19:06:59] 2026-03-18 18:06:11,039 | INFO     | mean y: 2338592.7736842106
[2026-03-18 19:06:59] 2026-03-18 18:06:11,039 | INFO     | intersect: -12572387100.10042
[2026-03-18 19:06:59] 2026-03-18 18:06:11,039 | INFO     | chi2: 1.099732736049399
[2026-03-18 19:06:59] 2026-03-18 18:06:11,039 | INFO     | current chi2=1.099732736049399 (change=-0.05350334766171976 %)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,039 | INFO     | right removable region: 189
[2026-03-18 19:06:59] 2026-03-18 18:06:11,040 | INFO     | sum of square deviations: 2126802667.5
[2026-03-18 19:06:59] 2026-03-18 18:06:11,040 | INFO     | sum of deviations: -3795564112.4999995
[2026-03-18 19:06:59] 2026-03-18 18:06:11,040 | INFO     | mean x: 1773851354.5
[2026-03-18 19:06:59] 2026-03-18 18:06:11,040 | INFO     | mean y: 2355939.931578947
[2026-03-18 19:06:59] 2026-03-18 18:06:11,040 | INFO     | intersect: 3168031178.6051807
[2026-03-18 19:06:59] 2026-03-18 18:06:11,041 | INFO     | chi2: 0.005394373921554668
[2026-03-18 19:06:59] 2026-03-18 18:06:11,041 | INFO     | current chi2=0.005394373921554668 (change=99.50922074834502 %)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,041 | INFO     | sum of square deviations: 1963274020.0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,041 | INFO     | sum of deviations: -3475317070.9999995
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | mean x: 1773851507.0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | mean y: 2355639.8756756755
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | intersect: 3142363789.984123
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | chi2: 0.005377349087247994
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | current chi2=0.005377349087247994 (change=0.31560352608570263 %)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | left removable region: 20
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | sum of square deviations: 1496660620.0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,042 | INFO     | sum of deviations: -2505975891.999997
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | mean x: 1773851629.0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | mean y: 2354540.905325444
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | intersect: 2972453011.3647957
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | chi2: 0.00507690918409193
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | current memory leak: -1.67 B/s (using 169 data points, chi2=0.01)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | could have reported an average CPU frequency of 3566 MHz (10 samples)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | ..............................
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | . Timing measurements:
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | . get job = 0 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | . initial setup = 10 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,043 | INFO     | . payload setup = 11 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,044 | INFO     | . stage-in = 0 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,044 | INFO     | . payload execution = 11886 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,044 | INFO     | . stage-out = 0 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,044 | INFO     | . log creation = 0 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,044 | INFO     | ..............................
[2026-03-18 19:06:59] 2026-03-18 18:06:11,191 | INFO     | 
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | job summary report
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | --------------------------------------------------
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | PanDA job id: 7056904316
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | task id: 49176616
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | errors: (none)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | pilot state: finished 
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | transexitcode: 0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | exeerrorcode: 0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | exeerrordiag: 
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | exitcode: 0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | exitmsg: OK
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | cpuconsumptiontime: 45668 s
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | nevents: 400
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | neventsw: 0
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | pid: 114539
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | pgrp: 114539
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | corecount: 4
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | event service: False
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | sizes: {0: 2280300, 11: 2280300, 11901: 2310159, 11902: 2319179, 11904: 2319235, 11906: 2319429}
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | --------------------------------------------------
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | 
[2026-03-18 19:06:59] 2026-03-18 18:06:11,192 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/3
[2026-03-18 19:06:59] 2026-03-18 18:06:11,213 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,213 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,213 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,213 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | job 7056904316 has completed (purged errors)
[2026-03-18 19:06:59] 2026-03-18 18:06:11,214 | INFO     | overall cleanup function is called
[2026-03-18 19:06:59] 2026-03-18 18:06:12,221 | INFO     | --- collectZombieJob: --- 10, [114539]
[2026-03-18 19:06:59] 2026-03-18 18:06:12,221 | INFO     | zombie collector waiting for pid 114539
[2026-03-18 19:06:59] 2026-03-18 18:06:12,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 19:06:59] 2026-03-18 18:06:12,222 | INFO     | collected zombie processes
[2026-03-18 19:06:59] 2026-03-18 18:06:12,222 | INFO     | will attempt to kill all subprocesses of pid=114539
[2026-03-18 19:06:59] 2026-03-18 18:06:12,703 | INFO     | process IDs to be killed: [114539] (in reverse order)
[2026-03-18 19:06:59] 2026-03-18 18:06:12,937 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 19:06:59] 2026-03-18 18:06:12,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 19:06:59] 2026-03-18 18:06:12,969 | INFO     | did not find any defunct processes belonging to 114539
[2026-03-18 19:06:59] 2026-03-18 18:06:12,999 | INFO     | did not find any defunct processes belonging to 114539
[2026-03-18 19:06:59] 2026-03-18 18:06:12,999 | INFO     | ready for new job
[2026-03-18 19:06:59] 2026-03-18 18:06:13,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 19:06:59] 2026-03-18 18:06:13,001 | INFO     | **************************************
[2026-03-18 19:06:59] 2026-03-18 18:06:13,001 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 19:06:59] 2026-03-18 18:06:13,001 | INFO     | **************************************
[2026-03-18 19:06:59] 2026-03-18 18:06:13,001 | INFO     | 
[2026-03-18 19:06:59] 2026-03-18 18:06:13,008 | INFO     | architecture information:
[2026-03-18 19:06:59] 2026-03-18 18:06:13,008 | INFO     | executing command: cat /etc/os-release
[2026-03-18 19:06:59] 2026-03-18 18:06:13,023 | INFO     | cat /etc/os-release:
[2026-03-18 19:06:59] NAME="CentOS Linux"
[2026-03-18 19:06:59] VERSION="7 (Core)"
[2026-03-18 19:06:59] ID="centos"
[2026-03-18 19:06:59] ID_LIKE="rhel fedora"
[2026-03-18 19:06:59] VERSION_ID="7"
[2026-03-18 19:06:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 19:06:59] ANSI_COLOR="0;31"
[2026-03-18 19:06:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 19:06:59] HOME_URL="https://www.centos.org/"
[2026-03-18 19:06:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 19:06:59] 
[2026-03-18 19:06:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 19:06:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 19:06:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 19:06:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 19:06:59] 
[2026-03-18 19:06:59] 2026-03-18 18:06:13,023 | INFO     | **************************************
[2026-03-18 19:06:59] 2026-03-18 18:06:13,526 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/3
[2026-03-18 19:06:59] 2026-03-18 18:06:13,541 | INFO     | sufficient remaining disk space (24991760384 B)
[2026-03-18 19:06:59] 2026-03-18 18:06:13,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 19:06:59] 2026-03-18 18:06:13,542 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 19:06:59] 2026-03-18 18:06:13,542 | INFO     | update_server=False
[2026-03-18 19:06:59] 2026-03-18 18:06:13,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 19:06:59] 2026-03-18 18:06:13,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 19:06:59] 2026-03-18 18:06:13,840 | INFO     | all payload control threads have been joined
[2026-03-18 19:06:59] 2026-03-18 18:06:14,055 | INFO     | all data control threads have been joined
[2026-03-18 19:06:59] 2026-03-18 18:06:14,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 19:06:59] 2026-03-18 18:06:14,402 | INFO     | aborting loop
[2026-03-18 19:06:59] 2026-03-18 18:06:14,455 | INFO     | all job control threads have been joined
[2026-03-18 19:06:59] 2026-03-18 18:06:14,547 | INFO     | [job] retrieve thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:14,552 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:14,846 | INFO     | [payload] control thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,012 | INFO     | [payload] validate_post thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 19:06:59] 2026-03-18 18:06:15,061 | INFO     | [data] control thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,294 | INFO     | [job] validate thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,407 | INFO     | [job] job monitor thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,461 | INFO     | [job] control thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,520 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,547 | INFO     | [data] copytool_out thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,762 | INFO     | [data] copytool_in thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,895 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:15,981 | INFO     | [payload] failed_post thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:16,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 19:06:59] 2026-03-18 18:06:17,115 | INFO     | [job] queue monitor thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:19,059 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 19:06:59] 2026-03-18 18:06:44,048 | INFO     | PID=101184 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 19:06:59] 2026-03-18 18:06:44,049 | INFO     | .. there are 48 such processes running
[2026-03-18 19:06:59] 2026-03-18 18:06:44,049 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 19:06:59] 2026-03-18 18:06:44,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 19:06:59] 2026-03-18 18:06:44,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 19:06:59] 2026-03-18 18:06:53,650 | INFO     | [monitor] cgroup control has ended
[2026-03-18 19:06:59] 2026-03-18 18:06:53,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22566595962688)>', '<ExcThread(monitor, started 22566282434304)>']
[2026-03-18 19:06:59] 2026-03-18 18:06:54,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 19:06:59] 2026-03-18 18:06:54,100 | INFO     | [monitor] control thread has ended
[2026-03-18 19:06:59] 2026-03-18 18:06:58,756 | INFO     | all workflow threads have been joined
[2026-03-18 19:06:59] 2026-03-18 18:06:58,757 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 19:06:59] 2026-03-18 18:06:58,757 | INFO     | traces error code: 0
[2026-03-18 19:06:59] 2026-03-18 18:06:58,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 19:06:59] 2026-03-18 18:06:58,943 [wrapper] ==== pilot stdout END ====
[2026-03-18 19:06:59] 2026-03-18 18:06:58,945 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 19:06:59] 2026-03-18 18:06:58,947 [wrapper] pilotpid: 101184
[2026-03-18 19:06:59] 2026-03-18 18:06:58,948 [wrapper] Pilot exit status: 0
[2026-03-18 19:06:59] 2026-03-18 18:06:58,955 [wrapper] pandaids: 7056904316
[2026-03-18 19:06:59] 2026-03-18 18:06:59,090 [wrapper] cleanup supervisor_pilot 1003949 101185
[2026-03-18 19:06:59] 2026-03-18 18:06:59,093 [wrapper] Test setup, not cleaning
[2026-03-18 19:06:59] 2026-03-18 18:06:59,103 [wrapper] apfmon messages muted
[2026-03-18 19:06:59] 2026-03-18 18:06:59,105 [wrapper] ==== wrapper stdout END ====
[2026-03-18 19:06:59] 2026-03-18 18:06:59,108 [wrapper] ==== wrapper stderr END ====
[2026-03-18 19:06:59]  *** Error codes and diagnostics ***
[2026-03-18 19:06:59]     "exeErrorCode": 0,
[2026-03-18 19:06:59]     "exeErrorDiag": "",
[2026-03-18 19:06:59]     "pilotErrorCode": 0,
[2026-03-18 19:06:59]     "pilotErrorDiag": "",
[2026-03-18 19:06:59]  *** Listing of results directory ***
[2026-03-18 19:06:59] total 488232
[2026-03-18 19:06:59] -rwx------. 1 boinc boinc     36322 Mar 16 14:17 runpilot2-wrapper.sh
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc       100 Mar 18 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 19:06:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 15:47 run_atlas
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc       105 Mar 18 15:47 job.xml
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc      6707 Mar 18 15:47 init_data.xml
[2026-03-18 19:06:59] -rw-r--r--. 2 boinc boinc 249422385 Mar 18 15:47 EVNT.49134569._000024.pool.root.1
[2026-03-18 19:06:59] -rw-r--r--. 2 boinc boinc     15845 Mar 18 15:47 start_atlas.sh
[2026-03-18 19:06:59] drwxrwx--x. 2 boinc boinc      4096 Mar 18 15:47 shared
[2026-03-18 19:06:59] -rw-r--r--. 2 boinc boinc    597552 Mar 18 15:47 input.tar.gz
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc         0 Mar 18 15:47 boinc_lockfile
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc      2607 Mar 18 15:47 pandaJob.out
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc   1011294 Mar 18 15:47 agis_schedconf.cvmfs.json
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc       443 Mar 18 15:47 workernode_map.json
[2026-03-18 19:06:59] drwx------. 5 boinc boinc      4096 Mar 18 15:47 pilot3
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc 242524920 Mar 18 19:05 HITS.49176616._000536.pool.root.1
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc        95 Mar 18 19:05 pilot_heartbeat.json
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc       529 Mar 18 19:05 boinc_task_state.xml
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc      1032 Mar 18 19:06 memory_monitor_summary.json
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc   1511579 Mar 18 19:06 agis_ddmendpoints.agis.ALL.json
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc    365553 Mar 18 19:06 log.49176616._000536.job.log.tgz.1
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc      6354 Mar 18 19:06 heartbeat.json
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc      8192 Mar 18 19:06 boinc_mmap_file
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc        27 Mar 18 19:06 wrapper_checkpoint.txt
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc      4828 Mar 18 19:06 pilotlog.txt
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc   1662138 Mar 18 19:06 log.49176616._000536.job.log.1
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc       357 Mar 18 19:06 output.list
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc       620 Mar 18 19:06 runtime_log
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc   2048000 Mar 18 19:06 result.tar.gz
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc      9205 Mar 18 19:06 runtime_log.err
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc       665 Mar 18 19:06 8S0KDmkzMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3qwLDmZgtPjn.diag
[2026-03-18 19:06:59] -rw-r--r--. 1 boinc boinc     21142 Mar 18 19:06 stderr.txt
[2026-03-18 19:06:59] HITS file was successfully produced:
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc 242524920 Mar 18 19:05 shared/HITS.pool.root.1
[2026-03-18 19:06:59]  *** Contents of shared directory: ***
[2026-03-18 19:06:59] total 483032
[2026-03-18 19:06:59] -rw-r--r--. 2 boinc boinc 249422385 Mar 18 15:47 ATLAS.root_0
[2026-03-18 19:06:59] -rw-r--r--. 2 boinc boinc     15845 Mar 18 15:47 start_atlas.sh
[2026-03-18 19:06:59] -rw-r--r--. 2 boinc boinc    597552 Mar 18 15:47 input.tar.gz
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc 242524920 Mar 18 19:05 HITS.pool.root.1
[2026-03-18 19:06:59] -rw-------. 1 boinc boinc   2048000 Mar 18 19:06 result.tar.gz
19:07:00 (95587): run_atlas exited; CPU time 46245.519500
19:07:00 (95587): called boinc_finish(0)

</stderr_txt>
]]>

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