Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:02 (3292437): wrapper (7.7.26015): starting
13:21:02 (3292437): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 13:21:02] Arguments: --nthreads 4
[2026-03-18 13:21:02] Threads: 4
[2026-03-18 13:21:02] Checking for CVMFS
[2026-03-18 13:21:02] No cvmfs_config command found, will try listing directly
[2026-03-18 13:21:02] CVMFS is ok
[2026-03-18 13:21:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 13:21:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 13:21:02] Further information can be found at the LHC@home message board.
[2026-03-18 13:21:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 13:21:02] Checking for apptainer binary...
[2026-03-18 13:21:02] which: no apptainer in ((null))
[2026-03-18 13:21:02] apptainer is not installed, using version from CVMFS
[2026-03-18 13:21:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 13:21:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-18 13:21:02] apptainer works
[2026-03-18 13:21:02] Set ATHENA_PROC_NUMBER=4
[2026-03-18 13:21:02] Set ATHENA_CORE_NUMBER=4
[2026-03-18 13:21:02] Starting ATLAS job with PandaID=7056909523
[2026-03-18 13:21:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 17:13:56]  *** The last 200 lines of the pilot log: ***
[2026-03-18 17:13:56] 2026-03-18 16:13:15,073 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7056909523/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,074 | INFO     | extracted standard info from prmon json
[2026-03-18 17:13:56] 2026-03-18 16:13:15,074 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 17:13:56] 2026-03-18 16:13:15,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 17:13:56] 2026-03-18 16:13:15,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 17:13:56] 2026-03-18 16:13:15,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 17:13:56] 2026-03-18 16:13:15,077 | INFO     | fitting pss+swap vs Time
[2026-03-18 17:13:56] 2026-03-18 16:13:15,077 | INFO     | sum of square deviations: 3675146117.0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,078 | INFO     | sum of deviations: 31577129368.5
[2026-03-18 17:13:56] 2026-03-18 16:13:15,078 | INFO     | mean x: 1773843433.5
[2026-03-18 17:13:56] 2026-03-18 16:13:15,078 | INFO     | mean y: 2341465.0833333335
[2026-03-18 17:13:56] 2026-03-18 16:13:15,078 | INFO     | intersect: -15238653531.005886
[2026-03-18 17:13:56] 2026-03-18 16:13:15,078 | INFO     | chi2: 1.091716668455219
[2026-03-18 17:13:56] 2026-03-18 16:13:15,078 | INFO     | sum of square deviations: 3438620752.0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,079 | INFO     | sum of deviations: 30602988679.000008
[2026-03-18 17:13:56] 2026-03-18 16:13:15,079 | INFO     | mean x: 1773843281.0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,079 | INFO     | mean y: 2340836.9058295963
[2026-03-18 17:13:56] 2026-03-18 16:13:15,079 | INFO     | intersect: -15784484684.69017
[2026-03-18 17:13:56] 2026-03-18 16:13:15,080 | INFO     | chi2: 1.0920580716409791
[2026-03-18 17:13:56] 2026-03-18 16:13:15,080 | INFO     | current chi2=1.0920580716409791 (change=-0.03127214190501666 %)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,080 | INFO     | right removable region: 222
[2026-03-18 17:13:56] 2026-03-18 16:13:15,080 | INFO     | sum of square deviations: 3438620752.0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,081 | INFO     | sum of deviations: 7846356739.0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,081 | INFO     | mean x: 1773843586.0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,081 | INFO     | mean y: 2356577.9417040357
[2026-03-18 17:13:56] 2026-03-18 16:13:15,081 | INFO     | intersect: -4045257444.8747983
[2026-03-18 17:13:56] 2026-03-18 16:13:15,081 | INFO     | chi2: 0.0015013084048310602
[2026-03-18 17:13:56] 2026-03-18 16:13:15,081 | INFO     | current chi2=0.0015013084048310602 (change=99.86248186473553 %)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,081 | INFO     | sum of square deviations: 3212467674.5
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | sum of deviations: 7224721111.000001
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | mean x: 1773843738.5
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | mean y: 2356994.9174311925
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | intersect: -3986952035.919982
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | chi2: 0.001431279707272926
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | current chi2=0.001431279707272926 (change=4.664511124615631 %)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | left removable region: 20
[2026-03-18 17:13:56] 2026-03-18 16:13:15,082 | INFO     | sum of square deviations: 2555770710.5
[2026-03-18 17:13:56] 2026-03-18 16:13:15,083 | INFO     | sum of deviations: 6992247030.500007
[2026-03-18 17:13:56] 2026-03-18 16:13:15,083 | INFO     | mean x: 1773843860.5
[2026-03-18 17:13:56] 2026-03-18 16:13:15,083 | INFO     | mean y: 2356429.5396039602
[2026-03-18 17:13:56] 2026-03-18 16:13:15,083 | INFO     | intersect: -4850643260.610727
[2026-03-18 17:13:56] 2026-03-18 16:13:15,083 | INFO     | chi2: 0.0006024088079364928
[2026-03-18 17:13:56] 2026-03-18 16:13:15,083 | INFO     | current memory leak: 2.74 B/s (using 202 data points, chi2=0.00)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,083 | INFO     | could have reported an average CPU frequency of 3568 MHz (11 samples)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | ..............................
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . Timing measurements:
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . get job = 0 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . initial setup = 8 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . payload setup = 8 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . stage-in = 0 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . payload execution = 13881 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . stage-out = 0 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | . log creation = 0 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,084 | INFO     | ..............................
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | 
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | job summary report
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | --------------------------------------------------
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | PanDA job id: 7056909523
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | task id: 49176974
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | errors: (none)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | pilot state: finished 
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | transexitcode: 0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | exeerrorcode: 0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | exeerrordiag: 
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | exitcode: 0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | exitmsg: OK
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | cpuconsumptiontime: 53652 s
[2026-03-18 17:13:56] 2026-03-18 16:13:15,153 | INFO     | nevents: 400
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | neventsw: 0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | pid: 3303615
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | pgrp: 3303615
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | corecount: 4
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | event service: False
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | sizes: {0: 2279938, 1: 2280342, 11: 2280342, 13894: 2310740, 13896: 2319818, 13899: 2319956}
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | --------------------------------------------------
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | 
[2026-03-18 17:13:56] 2026-03-18 16:13:15,154 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot248/slots/0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,202 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,202 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 17:13:56] 2026-03-18 16:13:15,202 | INFO     | job 7056909523 has completed (purged errors)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,202 | INFO     | overall cleanup function is called
[2026-03-18 17:13:56] 2026-03-18 16:13:15,357 | WARNING  | process 3303615 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 17:13:56] 2026-03-18 16:13:15,723 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,723 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7056909523/payload.stdout) since it has not been created yet
[2026-03-18 17:13:56] 2026-03-18 16:13:15,723 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-18 17:13:56] 2026-03-18 16:13:15,739 | INFO     | sufficient remaining disk space (29149364224 B)
[2026-03-18 17:13:56] 2026-03-18 16:13:15,739 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-18 17:13:56] 2026-03-18 16:13:15,739 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7056909523/HITS.49176974._000001.pool.root.1 since it does not exist
[2026-03-18 17:13:56] 2026-03-18 16:13:16,210 | INFO     | --- collectZombieJob: --- 10, [3303615]
[2026-03-18 17:13:56] 2026-03-18 16:13:16,210 | INFO     | zombie collector waiting for pid 3303615
[2026-03-18 17:13:56] 2026-03-18 16:13:16,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 17:13:56] 2026-03-18 16:13:16,213 | INFO     | collected zombie processes
[2026-03-18 17:13:56] 2026-03-18 16:13:16,213 | INFO     | will attempt to kill all subprocesses of pid=3303615
[2026-03-18 17:13:56] 2026-03-18 16:13:16,336 | INFO     | number of running child processes to parent process 3303615: 1
[2026-03-18 17:13:56] 2026-03-18 16:13:16,337 | INFO     | maximum number of monitored processes: 6
[2026-03-18 17:13:56] 2026-03-18 16:13:16,337 | INFO     | aborting job monitoring since job object (job id=7056909523) has expired
[2026-03-18 17:13:56] 2026-03-18 16:13:16,775 | INFO     | process IDs to be killed: [3303615] (in reverse order)
[2026-03-18 17:13:56] 2026-03-18 16:13:17,064 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 17:13:56] 2026-03-18 16:13:17,064 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 17:13:56] 2026-03-18 16:13:17,095 | INFO     | did not find any defunct processes belonging to 3303615
[2026-03-18 17:13:56] 2026-03-18 16:13:17,124 | INFO     | did not find any defunct processes belonging to 3303615
[2026-03-18 17:13:56] 2026-03-18 16:13:17,125 | INFO     | ready for new job
[2026-03-18 17:13:56] 2026-03-18 16:13:17,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 17:13:56] 2026-03-18 16:13:17,126 | INFO     | **************************************
[2026-03-18 17:13:56] 2026-03-18 16:13:17,127 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 17:13:56] 2026-03-18 16:13:17,127 | INFO     | **************************************
[2026-03-18 17:13:56] 2026-03-18 16:13:17,127 | INFO     | 
[2026-03-18 17:13:56] 2026-03-18 16:13:17,132 | INFO     | architecture information:
[2026-03-18 17:13:56] 2026-03-18 16:13:17,133 | INFO     | executing command: cat /etc/os-release
[2026-03-18 17:13:56] 2026-03-18 16:13:17,153 | INFO     | cat /etc/os-release:
[2026-03-18 17:13:56] NAME="CentOS Linux"
[2026-03-18 17:13:56] VERSION="7 (Core)"
[2026-03-18 17:13:56] ID="centos"
[2026-03-18 17:13:56] ID_LIKE="rhel fedora"
[2026-03-18 17:13:56] VERSION_ID="7"
[2026-03-18 17:13:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 17:13:56] ANSI_COLOR="0;31"
[2026-03-18 17:13:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 17:13:56] HOME_URL="https://www.centos.org/"
[2026-03-18 17:13:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 17:13:56] 
[2026-03-18 17:13:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 17:13:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 17:13:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 17:13:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 17:13:56] 
[2026-03-18 17:13:56] 2026-03-18 16:13:17,153 | INFO     | **************************************
[2026-03-18 17:13:56] 2026-03-18 16:13:17,655 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-18 17:13:56] 2026-03-18 16:13:17,672 | INFO     | sufficient remaining disk space (29136781312 B)
[2026-03-18 17:13:56] 2026-03-18 16:13:17,672 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 17:13:56] 2026-03-18 16:13:17,672 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 17:13:56] 2026-03-18 16:13:17,672 | INFO     | update_server=False
[2026-03-18 17:13:56] 2026-03-18 16:13:17,672 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 17:13:56] 2026-03-18 16:13:17,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 17:13:56] 2026-03-18 16:13:17,673 | INFO     | aborting loop
[2026-03-18 17:13:56] 2026-03-18 16:13:18,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 17:13:56] 2026-03-18 16:13:18,131 | INFO     | all data control threads have been joined
[2026-03-18 17:13:56] 2026-03-18 16:13:18,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 17:13:56] 2026-03-18 16:13:18,677 | INFO     | [job] retrieve thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:18,678 | INFO     | [job] job monitor thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:18,680 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:18,700 | INFO     | [job] validate thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:18,881 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:19,070 | INFO     | [data] copytool_in thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:19,134 | INFO     | all payload control threads have been joined
[2026-03-18 17:13:56] 2026-03-18 16:13:19,136 | INFO     | [data] control thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:19,266 | INFO     | all job control threads have been joined
[2026-03-18 17:13:56] 2026-03-18 16:13:19,335 | INFO     | [payload] validate_post thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:19,509 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:19,583 | INFO     | [payload] failed_post thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:20,007 | INFO     | [data] copytool_out thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:20,139 | INFO     | [payload] control thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:20,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 17:13:56] 2026-03-18 16:13:20,271 | INFO     | [job] control thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:21,169 | INFO     | [job] queue monitor thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:22,556 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:28,239 | INFO     | job.realtimelogging is not enabled
[2026-03-18 17:13:56] 2026-03-18 16:13:29,244 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 17:13:56] 2026-03-18 16:13:46,972 | INFO     | PID=3297424 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 17:13:56] 2026-03-18 16:13:46,972 | INFO     | .. there are 43 such processes running
[2026-03-18 17:13:56] 2026-03-18 16:13:46,973 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 17:13:56] 2026-03-18 16:13:46,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 17:13:56] 2026-03-18 16:13:46,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 17:13:56] 2026-03-18 16:13:47,985 | INFO     | [monitor] cgroup control has ended
[2026-03-18 17:13:56] 2026-03-18 16:13:48,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22984082110272)>', '<ExcThread(monitor, started 22983777183488)>']
[2026-03-18 17:13:56] 2026-03-18 16:13:48,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 17:13:56] 2026-03-18 16:13:48,983 | INFO     | [monitor] control thread has ended
[2026-03-18 17:13:56] 2026-03-18 16:13:53,994 | INFO     | all workflow threads have been joined
[2026-03-18 17:13:56] 2026-03-18 16:13:53,994 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 17:13:56] 2026-03-18 16:13:53,994 | INFO     | traces error code: 0
[2026-03-18 17:13:56] 2026-03-18 16:13:53,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 17:13:56] 2026-03-18 16:13:54,187 [wrapper] ==== pilot stdout END ====
[2026-03-18 17:13:56] 2026-03-18 16:13:54,190 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 17:13:56] 2026-03-18 16:13:54,201 [wrapper] pilotpid: 3297424
[2026-03-18 17:13:56] 2026-03-18 16:13:54,204 [wrapper] Pilot exit status: 0
[2026-03-18 17:13:56] 2026-03-18 16:13:54,216 [wrapper] pandaids: 7056909523
[2026-03-18 17:13:56] 2026-03-18 16:13:54,379 [wrapper] cleanup supervisor_pilot  158240 3297425
[2026-03-18 17:13:56] 2026-03-18 16:13:54,382 [wrapper] Test setup, not cleaning
[2026-03-18 17:13:56] 2026-03-18 16:13:54,388 [wrapper] apfmon messages muted
[2026-03-18 17:13:56] 2026-03-18 16:13:54,392 [wrapper] ==== wrapper stdout END ====
[2026-03-18 17:13:56] 2026-03-18 16:13:54,396 [wrapper] ==== wrapper stderr END ====
[2026-03-18 17:13:56]  *** Error codes and diagnostics ***
[2026-03-18 17:13:56]     "exeErrorCode": 0,
[2026-03-18 17:13:56]     "exeErrorDiag": "",
[2026-03-18 17:13:56]     "pilotErrorCode": 0,
[2026-03-18 17:13:56]     "pilotErrorDiag": "",
[2026-03-18 17:13:56]  *** Listing of results directory ***
[2026-03-18 17:13:56] total 482012
[2026-03-18 17:13:56] -rwx------. 1 boinc boinc     36322 Mar 16 14:15 runpilot2-wrapper.sh
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc       100 Mar 18 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 17:13:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 13:20 run_atlas
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc       105 Mar 18 13:20 job.xml
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc      6709 Mar 18 13:21 init_data.xml
[2026-03-18 17:13:56] -rw-r--r--. 2 boinc boinc 240836250 Mar 18 13:21 EVNT.49135955._000001.pool.root.1
[2026-03-18 17:13:56] -rw-r--r--. 2 boinc boinc     15845 Mar 18 13:21 start_atlas.sh
[2026-03-18 17:13:56] drwxrwx--x. 2 boinc boinc      4096 Mar 18 13:21 shared
[2026-03-18 17:13:56] -rw-r--r--. 2 boinc boinc    597536 Mar 18 13:21 input.tar.gz
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc         0 Mar 18 13:21 boinc_lockfile
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc      2622 Mar 18 13:21 pandaJob.out
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc   1010909 Mar 18 13:21 agis_schedconf.cvmfs.json
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc       445 Mar 18 13:21 workernode_map.json
[2026-03-18 17:13:56] drwx------. 5 boinc boinc      4096 Mar 18 13:21 pilot3
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc 244153710 Mar 18 17:12 HITS.49176974._000001.pool.root.1
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc       529 Mar 18 17:12 boinc_task_state.xml
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc      1032 Mar 18 17:13 memory_monitor_summary.json
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc   1511579 Mar 18 17:13 agis_ddmendpoints.agis.ALL.json
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc    380567 Mar 18 17:13 log.49176974._000001.job.log.tgz.1
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc      6342 Mar 18 17:13 heartbeat.json
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc        95 Mar 18 17:13 pilot_heartbeat.json
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc      4902 Mar 18 17:13 pilotlog.txt
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc   1942041 Mar 18 17:13 log.49176974._000001.job.log.1
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc       357 Mar 18 17:13 output.list
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc       620 Mar 18 17:13 runtime_log
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc   2344960 Mar 18 17:13 result.tar.gz
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc      9222 Mar 18 17:13 runtime_log.err
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc       665 Mar 18 17:13 EIvLDmuxMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmnwLDmBCzkXn.diag
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc        27 Mar 18 17:13 wrapper_checkpoint.txt
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc      8192 Mar 18 17:13 boinc_mmap_file
[2026-03-18 17:13:56] -rw-r--r--. 1 boinc boinc     21272 Mar 18 17:13 stderr.txt
[2026-03-18 17:13:56] HITS file was successfully produced:
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc 244153710 Mar 18 17:12 shared/HITS.pool.root.1
[2026-03-18 17:13:56]  *** Contents of shared directory: ***
[2026-03-18 17:13:56] total 476524
[2026-03-18 17:13:56] -rw-r--r--. 2 boinc boinc 240836250 Mar 18 13:21 ATLAS.root_0
[2026-03-18 17:13:56] -rw-r--r--. 2 boinc boinc     15845 Mar 18 13:21 start_atlas.sh
[2026-03-18 17:13:56] -rw-r--r--. 2 boinc boinc    597536 Mar 18 13:21 input.tar.gz
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc 244153710 Mar 18 17:12 HITS.pool.root.1
[2026-03-18 17:13:56] -rw-------. 1 boinc boinc   2344960 Mar 18 17:13 result.tar.gz
17:13:57 (3292437): run_atlas exited; CPU time 54348.749338
17:13:57 (3292437): called boinc_finish(0)

</stderr_txt>
]]>

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