Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:59 (1765698): wrapper (7.7.26015): starting
20:38:59 (1765698): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 20:38:59] Arguments: --nthreads 12
[2026-03-19 20:38:59] Threads: 12
[2026-03-19 20:38:59] Checking for CVMFS
[2026-03-19 20:38:59] No cvmfs_config command found, will try listing directly
[2026-03-19 20:38:59] CVMFS is ok
[2026-03-19 20:38:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 20:38:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 20:38:59] Further information can be found at the LHC@home message board.
[2026-03-19 20:38:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 20:38:59] Checking for apptainer binary...
[2026-03-19 20:38:59] which: no apptainer in ((null))
[2026-03-19 20:38:59] apptainer is not installed, using version from CVMFS
[2026-03-19 20:38:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 20:39:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-19 20:39:00] apptainer works
[2026-03-19 20:39:00] Set ATHENA_PROC_NUMBER=12
[2026-03-19 20:39:00] Set ATHENA_CORE_NUMBER=12
[2026-03-19 20:39:00] Starting ATLAS job with PandaID=7056902519
[2026-03-19 20:39:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 21:15:19]  *** The last 200 lines of the pilot log: ***
[2026-03-19 21:15:19]  status_code=0
[2026-03-19 21:15:19]  storage_token=
[2026-03-19 21:15:19]  surl=/var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7056902519/log.49176566._000196.job.log.tgz.1
[2026-03-19 21:15:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/56/log.49176566._000196.job.log.tgz.1
[2026-03-19 21:15:19]  workdir=None
[2026-03-19 21:15:19] ]
[2026-03-19 21:15:19] 2026-03-19 20:14:28,110 | INFO     | transferring file log.49176566._000196.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7056902519/log.49176566._000196.job.log.tgz.1 to /var/lib/b
[2026-03-19 21:15:19] 2026-03-19 20:14:28,110 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7056902519/log.49176566._000196.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/2/lo
[2026-03-19 21:15:19] 2026-03-19 20:14:28,120 | INFO     | adding to output.list: log.49176566._000196.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/56/log.49176566._000196.job.log.tg
[2026-03-19 21:15:19] 2026-03-19 20:14:28,120 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 21:15:19] 2026-03-19 20:14:28,120 | INFO     | summary of transferred files:
[2026-03-19 21:15:19] 2026-03-19 20:14:28,120 | INFO     |  -- lfn=log.49176566._000196.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 21:15:19] 2026-03-19 20:14:28,124 | INFO     | stage-out finished correctly
[2026-03-19 21:15:19] 2026-03-19 20:14:29,226 | INFO     | time since job start (2118s) is within the limit (345600.0s)
[2026-03-19 21:15:19] 2026-03-19 20:14:30,046 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 21:15:19] 2026-03-19 20:14:31,231 | INFO     | time since job start (2120s) is within the limit (345600.0s)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,627 | INFO     | job 7056902519 has state=finished
[2026-03-19 21:15:19] 2026-03-19 20:14:32,627 | INFO     | preparing for final server update for job 7056902519 in state='finished'
[2026-03-19 21:15:19] 2026-03-19 20:14:32,627 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7056902519/jobReport.json
[2026-03-19 21:15:19] 2026-03-19 20:14:32,629 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/2/workernode_map.json
[2026-03-19 21:15:19] 2026-03-19 20:14:32,629 | INFO     | this job has now completed (state=finished)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,629 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,629 | INFO     | log transfer has been attempted: DONE
[2026-03-19 21:15:19] 2026-03-19 20:14:32,629 | INFO     | job 7056902519 has finished - writing final server update
[2026-03-19 21:15:19] 2026-03-19 20:14:32,629 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3870688/.job.ad'
[2026-03-19 21:15:19] 2026-03-19 20:14:32,629 | INFO     | total number of processed events: 400 (read)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,645 | INFO     | using path: /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7056902519/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,645 | INFO     | extracted standard info from prmon json
[2026-03-19 21:15:19] 2026-03-19 20:14:32,645 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 21:15:19] 2026-03-19 20:14:32,645 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 21:15:19] 2026-03-19 20:14:32,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 21:15:19] 2026-03-19 20:14:32,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | fitting pss+swap vs Time
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | sum of square deviations: 6798267.0
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | sum of deviations: 165705402.0
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | mean x: 1773950300.5
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | mean y: 2687872.9285714286
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | intersect: -43236735890.85907
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | chi2: 0.0001976855288884216
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | current memory leak: 24.37 B/s (using 28 data points, chi2=0.00)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | could have reported an average CPU frequency of 3618 MHz (5 samples)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | ..............................
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | . Timing measurements:
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | . get job = 0 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | . initial setup = 4 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | . payload setup = 5 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | . stage-in = 0 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | . payload execution = 2096 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,646 | INFO     | . stage-out = 0 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,647 | INFO     | . log creation = 0 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,647 | INFO     | ..............................
[2026-03-19 21:15:19] 2026-03-19 20:14:32,687 | INFO     | 
[2026-03-19 21:15:19] 2026-03-19 20:14:32,687 | INFO     | job summary report
[2026-03-19 21:15:19] 2026-03-19 20:14:32,687 | INFO     | --------------------------------------------------
[2026-03-19 21:15:19] 2026-03-19 20:14:32,687 | INFO     | PanDA job id: 7056902519
[2026-03-19 21:15:19] 2026-03-19 20:14:32,687 | INFO     | task id: 49176566
[2026-03-19 21:15:19] 2026-03-19 20:14:32,687 | INFO     | errors: (none)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | pilot state: finished 
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | transexitcode: 0
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | exeerrorcode: 0
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | exeerrordiag: 
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | exitcode: 0
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | exitmsg: OK
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | cpuconsumptiontime: 22843 s
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | nevents: 400
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | neventsw: 0
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | pid: 1776354
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | pgrp: 1776354
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | corecount: 12
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | event service: False
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | sizes: {0: 2279851, 1: 2280312, 11: 2280312, 2105: 2305375, 2106: 2314450, 2108: 2314450, 2110: 2314804}
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | --------------------------------------------------
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | 
[2026-03-19 21:15:19] 2026-03-19 20:14:32,688 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/2
[2026-03-19 21:15:19] 2026-03-19 20:14:32,700 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | job 7056902519 has completed (purged errors)
[2026-03-19 21:15:19] 2026-03-19 20:14:32,701 | INFO     | overall cleanup function is called
[2026-03-19 21:15:19] 2026-03-19 20:14:33,708 | INFO     | --- collectZombieJob: --- 10, [1776354]
[2026-03-19 21:15:19] 2026-03-19 20:14:33,708 | INFO     | zombie collector waiting for pid 1776354
[2026-03-19 21:15:19] 2026-03-19 20:14:33,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 21:15:19] 2026-03-19 20:14:33,708 | INFO     | collected zombie processes
[2026-03-19 21:15:19] 2026-03-19 20:14:33,708 | INFO     | will attempt to kill all subprocesses of pid=1776354
[2026-03-19 21:15:19] 2026-03-19 20:14:33,905 | INFO     | process IDs to be killed: [1776354] (in reverse order)
[2026-03-19 21:15:19] 2026-03-19 20:14:33,998 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 21:15:19] 2026-03-19 20:14:33,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 21:15:19] 2026-03-19 20:14:34,017 | INFO     | did not find any defunct processes belonging to 1776354
[2026-03-19 21:15:19] 2026-03-19 20:14:34,032 | INFO     | did not find any defunct processes belonging to 1776354
[2026-03-19 21:15:19] 2026-03-19 20:14:34,032 | INFO     | ready for new job
[2026-03-19 21:15:19] 2026-03-19 20:14:34,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 21:15:19] 2026-03-19 20:14:34,033 | INFO     | **************************************
[2026-03-19 21:15:19] 2026-03-19 20:14:34,033 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 21:15:19] 2026-03-19 20:14:34,033 | INFO     | **************************************
[2026-03-19 21:15:19] 2026-03-19 20:14:34,033 | INFO     | 
[2026-03-19 21:15:19] 2026-03-19 20:14:34,037 | INFO     | architecture information:
[2026-03-19 21:15:19] 2026-03-19 20:14:34,037 | INFO     | executing command: cat /etc/os-release
[2026-03-19 21:15:19] 2026-03-19 20:14:34,044 | INFO     | cat /etc/os-release:
[2026-03-19 21:15:19] NAME="CentOS Linux"
[2026-03-19 21:15:19] VERSION="7 (Core)"
[2026-03-19 21:15:19] ID="centos"
[2026-03-19 21:15:19] ID_LIKE="rhel fedora"
[2026-03-19 21:15:19] VERSION_ID="7"
[2026-03-19 21:15:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 21:15:19] ANSI_COLOR="0;31"
[2026-03-19 21:15:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 21:15:19] HOME_URL="https://www.centos.org/"
[2026-03-19 21:15:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 21:15:19] 
[2026-03-19 21:15:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 21:15:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 21:15:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 21:15:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 21:15:19] 
[2026-03-19 21:15:19] 2026-03-19 20:14:34,044 | INFO     | **************************************
[2026-03-19 21:15:19] 2026-03-19 20:14:34,482 | WARNING  | process 1776354 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 21:15:19] 2026-03-19 20:14:34,546 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/2
[2026-03-19 21:15:19] 2026-03-19 20:14:34,557 | INFO     | sufficient remaining disk space (263785021440 B)
[2026-03-19 21:15:19] 2026-03-19 20:14:34,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 21:15:19] 2026-03-19 20:14:34,558 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 21:15:19] 2026-03-19 20:14:34,558 | INFO     | update_server=False
[2026-03-19 21:15:19] 2026-03-19 20:14:34,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 21:15:19] 2026-03-19 20:14:34,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 21:15:19] 2026-03-19 20:14:34,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 21:15:19] 2026-03-19 20:14:34,615 | INFO     | all payload control threads have been joined
[2026-03-19 21:15:19] 2026-03-19 20:14:34,643 | INFO     | using path: /var/lib/boinc/var/slot72/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 21:15:19] 2026-03-19 20:14:34,643 | INFO     | using path: /var/lib/boinc/var/slot72/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 21:15:19] 2026-03-19 20:14:34,644 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-19 21:15:19] 2026-03-19 20:14:34,644 | WARNING  | maxPSS not found in memory monitor output
[2026-03-19 21:15:19] 2026-03-19 20:14:34,644 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7056902519/payload.stdout) since it has not been created yet
[2026-03-19 21:15:19] 2026-03-19 20:14:34,644 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/2
[2026-03-19 21:15:19] 2026-03-19 20:14:34,654 | INFO     | sufficient remaining disk space (263785021440 B)
[2026-03-19 21:15:19] 2026-03-19 20:14:34,654 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-19 21:15:19] 2026-03-19 20:14:34,654 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot72/slots/2/PanDA_Pilot-7056902519/HITS.49176566._000196.pool.root.1 since it does not exist
[2026-03-19 21:15:19] 2026-03-19 20:14:34,873 | INFO     | number of running child processes to parent process 1776354: 1
[2026-03-19 21:15:19] 2026-03-19 20:14:34,873 | INFO     | maximum number of monitored processes: 6
[2026-03-19 21:15:19] 2026-03-19 20:14:34,873 | INFO     | aborting job monitoring since job object (job id=7056902519) has expired
[2026-03-19 21:15:19] 2026-03-19 20:14:34,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 21:15:19] 2026-03-19 20:14:34,873 | INFO     | will abort loop
[2026-03-19 21:15:19] 2026-03-19 20:14:34,918 | INFO     | all job control threads have been joined
[2026-03-19 21:15:19] 2026-03-19 20:14:35,249 | INFO     | all data control threads have been joined
[2026-03-19 21:15:19] 2026-03-19 20:14:35,563 | INFO     | [job] retrieve thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:35,564 | INFO     | [job] queue monitor thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:35,621 | INFO     | [payload] control thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:35,879 | INFO     | [job] job monitor thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:35,923 | INFO     | [job] control thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:35,962 | INFO     | [job] validate thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 21:15:19] 2026-03-19 20:14:36,104 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,216 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,233 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,255 | INFO     | [data] control thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,309 | INFO     | [payload] failed_post thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,352 | INFO     | [data] copytool_in thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,564 | INFO     | [data] copytool_out thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:36,819 | INFO     | [payload] validate_post thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:40,077 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:14:45,237 | INFO     | job.realtimelogging is not enabled
[2026-03-19 21:15:19] 2026-03-19 20:14:46,242 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 21:15:19] 2026-03-19 20:15:04,595 | INFO     | PID=1770617 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 21:15:19] 2026-03-19 20:15:04,595 | INFO     | .. there are 8 such processes running
[2026-03-19 21:15:19] 2026-03-19 20:15:04,595 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 21:15:19] 2026-03-19 20:15:04,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 21:15:19] 2026-03-19 20:15:04,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 21:15:19] 2026-03-19 20:15:13,774 | INFO     | [monitor] cgroup control has ended
[2026-03-19 21:15:19] 2026-03-19 20:15:14,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23357435332416)>', '<ExcThread(monitor, started 23357199501056)>']
[2026-03-19 21:15:19] 2026-03-19 20:15:14,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 21:15:19] 2026-03-19 20:15:14,641 | INFO     | [monitor] control thread has ended
[2026-03-19 21:15:19] 2026-03-19 20:15:19,141 | INFO     | all workflow threads have been joined
[2026-03-19 21:15:19] 2026-03-19 20:15:19,142 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 21:15:19] 2026-03-19 20:15:19,142 | INFO     | traces error code: 0
[2026-03-19 21:15:19] 2026-03-19 20:15:19,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 21:15:19] 2026-03-19 20:15:19,246 [wrapper] ==== pilot stdout END ====
[2026-03-19 21:15:19] 2026-03-19 20:15:19,248 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 21:15:19] 2026-03-19 20:15:19,250 [wrapper] pilotpid: 1770617
[2026-03-19 21:15:19] 2026-03-19 20:15:19,252 [wrapper] Pilot exit status: 0
[2026-03-19 21:15:19] 2026-03-19 20:15:19,258 [wrapper] pandaids: 7056902519
[2026-03-19 21:15:19] 2026-03-19 20:15:19,341 [wrapper] cleanup supervisor_pilot 1889064 1770618
[2026-03-19 21:15:19] 2026-03-19 20:15:19,343 [wrapper] Test setup, not cleaning
[2026-03-19 21:15:19] 2026-03-19 20:15:19,345 [wrapper] apfmon messages muted
[2026-03-19 21:15:19] 2026-03-19 20:15:19,346 [wrapper] ==== wrapper stdout END ====
[2026-03-19 21:15:19] 2026-03-19 20:15:19,348 [wrapper] ==== wrapper stderr END ====
[2026-03-19 21:15:19]  *** Error codes and diagnostics ***
[2026-03-19 21:15:19]     "exeErrorCode": 0,
[2026-03-19 21:15:19]     "exeErrorDiag": "",
[2026-03-19 21:15:19]     "pilotErrorCode": 0,
[2026-03-19 21:15:19]     "pilotErrorDiag": "",
[2026-03-19 21:15:19]  *** Listing of results directory ***
[2026-03-19 21:15:19] total 408756
[2026-03-19 21:15:19] -rwx------. 1 boinc boinc     36322 Mar 16 14:16 runpilot2-wrapper.sh
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc       100 Mar 19 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 21:15:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 19:55 run_atlas
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc       105 Mar 19 19:55 job.xml
[2026-03-19 21:15:19] -rw-r--r--. 2 boinc boinc 221220099 Mar 19 20:38 EVNT.49134392._000008.pool.root.1
[2026-03-19 21:15:19] -rw-r--r--. 2 boinc boinc     15845 Mar 19 20:38 start_atlas.sh
[2026-03-19 21:15:19] drwxrwx--x. 2 boinc boinc      4096 Mar 19 20:38 shared
[2026-03-19 21:15:19] -rw-r--r--. 2 boinc boinc    597545 Mar 19 20:38 input.tar.gz
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc      6709 Mar 19 20:38 init_data.xml
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc         0 Mar 19 20:38 boinc_lockfile
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc      2592 Mar 19 20:39 pandaJob.out
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc   1010724 Mar 19 20:39 agis_schedconf.cvmfs.json
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc   1511579 Mar 19 20:39 agis_ddmendpoints.agis.ALL.json
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc       444 Mar 19 20:39 workernode_map.json
[2026-03-19 21:15:19] drwx------. 5 boinc boinc      4096 Mar 19 20:39 pilot3
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc       529 Mar 19 21:14 boinc_task_state.xml
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc 191999238 Mar 19 21:14 HITS.49176566._000196.pool.root.1
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc      1019 Mar 19 21:14 memory_monitor_summary.json
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc    359874 Mar 19 21:14 log.49176566._000196.job.log.tgz.1
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc      6342 Mar 19 21:14 heartbeat.json
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc        27 Mar 19 21:15 wrapper_checkpoint.txt
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc      8192 Mar 19 21:15 boinc_mmap_file
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc        95 Mar 19 21:15 pilot_heartbeat.json
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc      6442 Mar 19 21:15 pilotlog.txt
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc    346309 Mar 19 21:15 log.49176566._000196.job.log.1
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc       357 Mar 19 21:15 output.list
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc       620 Mar 19 21:15 runtime_log
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc    727040 Mar 19 21:15 result.tar.gz
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc      9206 Mar 19 21:15 runtime_log.err
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc       660 Mar 19 21:15 GltKDmYzMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvpwLDmDtbS2n.diag
[2026-03-19 21:15:19] -rw-r--r--. 1 boinc boinc     13399 Mar 19 21:15 stderr.txt
[2026-03-19 21:15:19] HITS file was successfully produced:
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc 191999238 Mar 19 21:14 shared/HITS.pool.root.1
[2026-03-19 21:15:19]  *** Contents of shared directory: ***
[2026-03-19 21:15:19] total 404856
[2026-03-19 21:15:19] -rw-r--r--. 2 boinc boinc 221220099 Mar 19 20:38 ATLAS.root_0
[2026-03-19 21:15:19] -rw-r--r--. 2 boinc boinc     15845 Mar 19 20:38 start_atlas.sh
[2026-03-19 21:15:19] -rw-r--r--. 2 boinc boinc    597545 Mar 19 20:38 input.tar.gz
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc 191999238 Mar 19 21:14 HITS.pool.root.1
[2026-03-19 21:15:19] -rw-------. 1 boinc boinc    727040 Mar 19 21:15 result.tar.gz
21:15:20 (1765698): run_atlas exited; CPU time 22894.938519
21:15:20 (1765698): called boinc_finish(0)

</stderr_txt>
]]>

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