Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:41:34 (3748851): wrapper (7.7.26015): starting
06:41:34 (3748851): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 06:41:34] Arguments: --nthreads 4
[2026-03-19 06:41:34] Threads: 4
[2026-03-19 06:41:34] Checking for CVMFS
[2026-03-19 06:41:34] No cvmfs_config command found, will try listing directly
[2026-03-19 06:41:34] CVMFS is ok
[2026-03-19 06:41:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 06:41:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 06:41:34] Further information can be found at the LHC@home message board.
[2026-03-19 06:41:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 06:41:34] Checking for apptainer binary...
[2026-03-19 06:41:34] which: no apptainer in ((null))
[2026-03-19 06:41:34] apptainer is not installed, using version from CVMFS
[2026-03-19 06:41:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 06:41:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-19 06:41:34] apptainer works
[2026-03-19 06:41:34] Set ATHENA_PROC_NUMBER=4
[2026-03-19 06:41:34] Set ATHENA_CORE_NUMBER=4
[2026-03-19 06:41:34] Starting ATLAS job with PandaID=7056907433
[2026-03-19 06:41:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 09:30:01]  *** The last 200 lines of the pilot log: ***
[2026-03-19 09:30:01] 2026-03-19 08:25:04,078 | INFO     | extracted standard info from prmon json
[2026-03-19 09:30:01] 2026-03-19 08:25:04,079 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 09:30:01] 2026-03-19 08:25:04,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 09:30:01] 2026-03-19 08:25:04,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 09:30:01] 2026-03-19 08:25:04,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 09:30:01] 2026-03-19 08:25:04,081 | INFO     | fitting pss+swap vs Time
[2026-03-19 09:30:01] 2026-03-19 08:25:04,081 | INFO     | sum of square deviations: 1294014960.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,081 | INFO     | sum of deviations: 4976303933.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,081 | INFO     | mean x: 1773903817.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,081 | INFO     | mean y: 2303471.614906832
[2026-03-19 09:30:01] 2026-03-19 08:25:04,081 | INFO     | intersect: -6819475885.016961
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | chi2: 1.8950030203340607
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | sum of square deviations: 1177156955.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | sum of deviations: 14605155458.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | mean x: 1773903664.5
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | mean y: 2315707.5512820515
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | intersect: -22006761907.36913
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | chi2: 1.0993084337979624
[2026-03-19 09:30:01] 2026-03-19 08:25:04,082 | INFO     | current chi2=1.0993084337979624 (change=41.98909331531457 %)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | sum of square deviations: 1067554900.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | sum of deviations: 14006051887.999998
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | mean x: 1773903512.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | mean y: 2314873.6490066224
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | intersect: -23270853216.701595
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | chi2: 1.100256518459378
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | current chi2=1.100256518459378 (change=-0.08624373581307841 %)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | right removable region: 150
[2026-03-19 09:30:01] 2026-03-19 08:25:04,083 | INFO     | sum of square deviations: 1177156955.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,084 | INFO     | sum of deviations: -9887768617.5
[2026-03-19 09:30:01] 2026-03-19 08:25:04,084 | INFO     | mean x: 1773903969.5
[2026-03-19 09:30:01] 2026-03-19 08:25:04,084 | INFO     | mean y: 2322459.9166666665
[2026-03-19 09:30:01] 2026-03-19 08:25:04,084 | INFO     | intersect: 14902588669.600468
[2026-03-19 09:30:01] 2026-03-19 08:25:04,084 | INFO     | chi2: 0.8207531875945705
[2026-03-19 09:30:01] 2026-03-19 08:25:04,084 | INFO     | current chi2=0.8207531875945705 (change=56.688555174445895 %)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,084 | INFO     | sum of square deviations: 1067554900.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | sum of deviations: -9441018495.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | mean x: 1773904122.0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | mean y: 2321834.357615894
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | intersect: 15690003680.189375
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | chi2: 0.8212481381939222
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | current chi2=0.8212481381939222 (change=-0.06030443826873876 %)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | left removable region: 20
[2026-03-19 09:30:01] 2026-03-19 08:25:04,085 | INFO     | sum of square deviations: 681212772.5
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | sum of deviations: 678128277.0000002
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | mean x: 1773904091.5
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | mean y: 2333892.923076923
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | intersect: -1763538054.4238083
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | chi2: 0.0027087102218854207
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | current memory leak: 1.00 B/s (using 130 data points, chi2=0.00)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | could have reported an average CPU frequency of 3575 MHz (9 samples)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | ..............................
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . Timing measurements:
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . get job = 0 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . initial setup = 5 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . payload setup = 9 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . stage-in = 0 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . payload execution = 9768 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . stage-out = 0 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | . log creation = 0 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,086 | INFO     | ..............................
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | 
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | job summary report
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | --------------------------------------------------
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | PanDA job id: 7056907433
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | task id: 49176860
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | errors: (none)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | pilot state: finished 
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | transexitcode: 0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | exeerrorcode: 0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | exeerrordiag: 
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | exitcode: 0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | exitmsg: OK
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | cpuconsumptiontime: 37488 s
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | nevents: 400
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | neventsw: 0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | pid: 3772130
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | pgrp: 3772130
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | corecount: 4
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | event service: False
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | sizes: {0: 2280328, 10: 2280328, 9781: 2308813, 9782: 2317891, 9783: 2318093}
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | --------------------------------------------------
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | 
[2026-03-19 09:30:01] 2026-03-19 08:25:04,597 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot248/slots/0
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | job 7056907433 has completed (purged errors)
[2026-03-19 09:30:01] 2026-03-19 08:25:04,614 | INFO     | overall cleanup function is called
[2026-03-19 09:30:01] 2026-03-19 08:25:05,621 | INFO     | --- collectZombieJob: --- 10, [3772130]
[2026-03-19 09:30:01] 2026-03-19 08:25:05,621 | INFO     | zombie collector waiting for pid 3772130
[2026-03-19 09:30:01] 2026-03-19 08:25:05,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 09:30:01] 2026-03-19 08:25:05,621 | INFO     | collected zombie processes
[2026-03-19 09:30:01] 2026-03-19 08:25:05,621 | INFO     | will attempt to kill all subprocesses of pid=3772130
[2026-03-19 09:30:01] 2026-03-19 08:25:06,124 | INFO     | process IDs to be killed: [3772130] (in reverse order)
[2026-03-19 09:30:01] 2026-03-19 08:25:06,356 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 09:30:01] 2026-03-19 08:25:06,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 09:30:01] 2026-03-19 08:25:06,390 | INFO     | did not find any defunct processes belonging to 3772130
[2026-03-19 09:30:01] 2026-03-19 08:25:06,425 | INFO     | did not find any defunct processes belonging to 3772130
[2026-03-19 09:30:01] 2026-03-19 08:25:06,425 | INFO     | ready for new job
[2026-03-19 09:30:01] 2026-03-19 08:25:06,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 09:30:01] 2026-03-19 08:25:06,427 | INFO     | **************************************
[2026-03-19 09:30:01] 2026-03-19 08:25:06,427 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 09:30:01] 2026-03-19 08:25:06,427 | INFO     | **************************************
[2026-03-19 09:30:01] 2026-03-19 08:25:06,427 | INFO     | 
[2026-03-19 09:30:01] 2026-03-19 08:25:06,433 | INFO     | architecture information:
[2026-03-19 09:30:01] 2026-03-19 08:25:06,434 | INFO     | executing command: cat /etc/os-release
[2026-03-19 09:30:01] 2026-03-19 08:25:06,451 | INFO     | cat /etc/os-release:
[2026-03-19 09:30:01] NAME="CentOS Linux"
[2026-03-19 09:30:01] VERSION="7 (Core)"
[2026-03-19 09:30:01] ID="centos"
[2026-03-19 09:30:01] ID_LIKE="rhel fedora"
[2026-03-19 09:30:01] VERSION_ID="7"
[2026-03-19 09:30:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 09:30:01] ANSI_COLOR="0;31"
[2026-03-19 09:30:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 09:30:01] HOME_URL="https://www.centos.org/"
[2026-03-19 09:30:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 09:30:01] 
[2026-03-19 09:30:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 09:30:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 09:30:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 09:30:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 09:30:01] 
[2026-03-19 09:30:01] 2026-03-19 08:25:06,451 | INFO     | **************************************
[2026-03-19 09:30:01] 2026-03-19 08:25:06,954 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-19 09:30:01] 2026-03-19 08:25:06,968 | INFO     | sufficient remaining disk space (44824526848 B)
[2026-03-19 09:30:01] 2026-03-19 08:25:06,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 09:30:01] 2026-03-19 08:25:06,969 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 09:30:01] 2026-03-19 08:25:06,969 | INFO     | update_server=False
[2026-03-19 09:30:01] 2026-03-19 08:25:06,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 09:30:01] 2026-03-19 08:25:06,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 09:30:01] 2026-03-19 08:25:07,213 | INFO     | all job control threads have been joined
[2026-03-19 09:30:01] 2026-03-19 08:25:07,594 | WARNING  | process 3772130 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 09:30:01] 2026-03-19 08:25:07,607 | INFO     | all data control threads have been joined
[2026-03-19 09:30:01] 2026-03-19 08:25:07,935 | INFO     | all payload control threads have been joined
[2026-03-19 09:30:01] 2026-03-19 08:25:07,942 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 09:30:01] 2026-03-19 08:25:07,974 | INFO     | [job] retrieve thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,007 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,141 | INFO     | [payload] validate_post thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,219 | INFO     | [job] control thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,496 | INFO     | number of running child processes to parent process 3772130: 1
[2026-03-19 09:30:01] 2026-03-19 08:25:08,496 | INFO     | maximum number of monitored processes: 6
[2026-03-19 09:30:01] 2026-03-19 08:25:08,496 | INFO     | aborting job monitoring since job object (job id=7056907433) has expired
[2026-03-19 09:30:01] 2026-03-19 08:25:08,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 09:30:01] 2026-03-19 08:25:08,496 | INFO     | will abort loop
[2026-03-19 09:30:01] 2026-03-19 08:25:08,612 | INFO     | [data] control thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,749 | INFO     | [payload] failed_post thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,805 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,883 | INFO     | [data] copytool_in thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,940 | INFO     | [payload] control thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:08,975 | INFO     | [data] copytool_out thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:09,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 09:30:01] 2026-03-19 08:25:09,151 | INFO     | [job] validate thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:09,298 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:09,501 | INFO     | [job] job monitor thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:09,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 09:30:01] 2026-03-19 08:25:10,150 | INFO     | [job] queue monitor thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:13,653 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 09:30:01] 2026-03-19 08:25:36,944 | INFO     | PID=3757725 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 09:30:01] 2026-03-19 08:25:36,944 | INFO     | .. there are 36 such processes running
[2026-03-19 09:30:01] 2026-03-19 08:25:36,944 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 09:30:01] 2026-03-19 08:25:36,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 09:30:01] 2026-03-19 08:25:36,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 09:30:01] 2026-03-19 08:26:05,741 | INFO     | [monitor] cgroup control has ended
[2026-03-19 09:30:01] 2026-03-19 08:26:06,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23175343490880)>', '<ExcThread(monitor, started 23175037445888)>']
[2026-03-19 09:30:01] 2026-03-19 08:26:06,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 09:30:01] 2026-03-19 08:26:06,086 | INFO     | [monitor] control thread has ended
[2026-03-19 09:30:01] 2026-03-19 08:26:11,089 | INFO     | all workflow threads have been joined
[2026-03-19 09:30:01] 2026-03-19 08:26:11,089 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 09:30:01] 2026-03-19 08:26:11,089 | INFO     | traces error code: 0
[2026-03-19 09:30:01] 2026-03-19 08:26:11,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 09:30:01] 2026-03-19 08:26:11,265 [wrapper] ==== pilot stdout END ====
[2026-03-19 09:30:01] 2026-03-19 08:26:11,268 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 09:30:01] 2026-03-19 08:26:11,271 [wrapper] pilotpid: 3757725
[2026-03-19 09:30:01] 2026-03-19 08:26:11,273 [wrapper] Pilot exit status: 0
[2026-03-19 09:30:01] 2026-03-19 08:26:11,283 [wrapper] pandaids: 7056907433
[2026-03-19 09:30:01] 2026-03-19 08:26:11,428 [wrapper] cleanup supervisor_pilot   69462 3757726
[2026-03-19 09:30:01] 2026-03-19 08:26:11,431 [wrapper] Test setup, not cleaning
[2026-03-19 09:30:01] 2026-03-19 08:26:11,433 [wrapper] apfmon messages muted
[2026-03-19 09:30:01] 2026-03-19 08:26:11,436 [wrapper] ==== wrapper stdout END ====
[2026-03-19 09:30:01] 2026-03-19 08:26:11,438 [wrapper] ==== wrapper stderr END ====
[2026-03-19 09:30:01]  *** Error codes and diagnostics ***
[2026-03-19 09:30:01]     "exeErrorCode": 0,
[2026-03-19 09:30:01]     "exeErrorDiag": "",
[2026-03-19 09:30:01]     "pilotErrorCode": 0,
[2026-03-19 09:30:01]     "pilotErrorDiag": "",
[2026-03-19 09:30:01]  *** Listing of results directory ***
[2026-03-19 09:30:01] total 433264
[2026-03-19 09:30:01] -rwx------. 1 boinc boinc     36322 Mar 16 14:17 runpilot2-wrapper.sh
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc       100 Mar 19 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 09:30:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 06:41 run_atlas
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc       105 Mar 19 06:41 job.xml
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc      6709 Mar 19 06:41 init_data.xml
[2026-03-19 09:30:01] -rw-r--r--. 2 boinc boinc 232640858 Mar 19 06:41 EVNT.49135504._000002.pool.root.1
[2026-03-19 09:30:01] -rw-r--r--. 2 boinc boinc     15845 Mar 19 06:41 start_atlas.sh
[2026-03-19 09:30:01] drwxrwx--x. 2 boinc boinc      4096 Mar 19 06:41 shared
[2026-03-19 09:30:01] -rw-r--r--. 2 boinc boinc    597539 Mar 19 06:41 input.tar.gz
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc         0 Mar 19 06:41 boinc_lockfile
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc      2623 Mar 19 06:41 pandaJob.out
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc   1010817 Mar 19 06:41 agis_schedconf.cvmfs.json
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc   1511579 Mar 19 06:41 agis_ddmendpoints.agis.ALL.json
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc       444 Mar 19 06:41 workernode_map.json
[2026-03-19 09:30:01] drwx------. 5 boinc boinc      4096 Mar 19 06:41 pilot3
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc       528 Mar 19 09:24 boinc_task_state.xml
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc 203652123 Mar 19 09:24 HITS.49176860._000032.pool.root.1
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc        95 Mar 19 09:24 pilot_heartbeat.json
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc      1028 Mar 19 09:24 memory_monitor_summary.json
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc    328718 Mar 19 09:25 log.49176860._000032.job.log.tgz.1
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc      6345 Mar 19 09:25 heartbeat.json
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc      5363 Mar 19 09:26 pilotlog.txt
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc   1380744 Mar 19 09:26 log.49176860._000032.job.log.1
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc       357 Mar 19 09:26 output.list
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc       620 Mar 19 09:26 runtime_log
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc   1730560 Mar 19 09:26 result.tar.gz
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc      9221 Mar 19 09:26 runtime_log.err
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc       663 Mar 19 09:26 1POLDm3zMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhgtLDmkKlBGo.diag
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc        26 Mar 19 09:29 wrapper_checkpoint.txt
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc      8192 Mar 19 09:30 boinc_mmap_file
[2026-03-19 09:30:01] -rw-r--r--. 1 boinc boinc     20836 Mar 19 09:30 stderr.txt
[2026-03-19 09:30:01] HITS file was successfully produced:
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc 203652123 Mar 19 09:24 shared/HITS.pool.root.1
[2026-03-19 09:30:01]  *** Contents of shared directory: ***
[2026-03-19 09:30:01] total 428372
[2026-03-19 09:30:01] -rw-r--r--. 2 boinc boinc 232640858 Mar 19 06:41 ATLAS.root_0
[2026-03-19 09:30:01] -rw-r--r--. 2 boinc boinc     15845 Mar 19 06:41 start_atlas.sh
[2026-03-19 09:30:01] -rw-r--r--. 2 boinc boinc    597539 Mar 19 06:41 input.tar.gz
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc 203652123 Mar 19 09:24 HITS.pool.root.1
[2026-03-19 09:30:01] -rw-------. 1 boinc boinc   1730560 Mar 19 09:26 result.tar.gz
09:30:02 (3748851): run_atlas exited; CPU time 37991.378982
09:30:02 (3748851): called boinc_finish(0)

</stderr_txt>
]]>

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