Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:54:03 (3472884): wrapper (7.7.26015): starting
11:54:03 (3472884): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 11:54:03] Arguments: --nthreads 4
[2026-03-18 11:54:03] Threads: 4
[2026-03-18 11:54:03] Checking for CVMFS
[2026-03-18 11:54:03] No cvmfs_config command found, will try listing directly
[2026-03-18 11:54:03] CVMFS is ok
[2026-03-18 11:54:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 11:54:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 11:54:03] Further information can be found at the LHC@home message board.
[2026-03-18 11:54:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 11:54:03] Checking for apptainer binary...
[2026-03-18 11:54:03] which: no apptainer in ((null))
[2026-03-18 11:54:03] apptainer is not installed, using version from CVMFS
[2026-03-18 11:54:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 11:54:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-18 11:54:04] apptainer works
[2026-03-18 11:54:04] Set ATHENA_PROC_NUMBER=4
[2026-03-18 11:54:04] Set ATHENA_CORE_NUMBER=4
[2026-03-18 11:54:04] Starting ATLAS job with PandaID=7056909316
[2026-03-18 11:54:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 15:53:18]  *** The last 200 lines of the pilot log: ***
[2026-03-18 15:53:18] 2026-03-18 14:50:02,989 | INFO     | total number of processed events: 400 (read)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,006 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7056909316/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,007 | INFO     | extracted standard info from prmon json
[2026-03-18 15:53:18] 2026-03-18 14:50:03,007 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 15:53:18] 2026-03-18 14:50:03,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 15:53:18] 2026-03-18 14:50:03,007 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 15:53:18] 2026-03-18 14:50:03,007 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 15:53:18] 2026-03-18 14:50:03,010 | INFO     | fitting pss+swap vs Time
[2026-03-18 15:53:18] 2026-03-18 14:50:03,010 | INFO     | sum of square deviations: 3822136780.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,011 | INFO     | sum of deviations: 29987480623.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,011 | INFO     | mean x: 1773838325.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,011 | INFO     | mean y: 2335062.649350649
[2026-03-18 15:53:18] 2026-03-18 14:50:03,011 | INFO     | intersect: -13914734226.344612
[2026-03-18 15:53:18] 2026-03-18 14:50:03,011 | INFO     | chi2: 1.1030075332517042
[2026-03-18 15:53:18] 2026-03-18 14:50:03,011 | INFO     | sum of square deviations: 3579276412.5
[2026-03-18 15:53:18] 2026-03-18 14:50:03,012 | INFO     | sum of deviations: 29290890452.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,012 | INFO     | mean x: 1773838172.5
[2026-03-18 15:53:18] 2026-03-18 14:50:03,012 | INFO     | mean y: 2334625.1681415928
[2026-03-18 15:53:18] 2026-03-18 14:50:03,012 | INFO     | intersect: -14513811545.8349
[2026-03-18 15:53:18] 2026-03-18 14:50:03,012 | INFO     | chi2: 1.1032389203505588
[2026-03-18 15:53:18] 2026-03-18 14:50:03,012 | INFO     | current chi2=1.1032389203505588 (change=-0.020977834863238093 %)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,012 | INFO     | right removable region: 225
[2026-03-18 15:53:18] 2026-03-18 14:50:03,013 | INFO     | sum of square deviations: 3579276412.5
[2026-03-18 15:53:18] 2026-03-18 14:50:03,013 | INFO     | sum of deviations: 5608507353.499999
[2026-03-18 15:53:18] 2026-03-18 14:50:03,013 | INFO     | mean x: 1773838477.5
[2026-03-18 15:53:18] 2026-03-18 14:50:03,013 | INFO     | mean y: 2350190.4557522126
[2026-03-18 15:53:18] 2026-03-18 14:50:03,014 | INFO     | intersect: -2777146277.108554
[2026-03-18 15:53:18] 2026-03-18 14:50:03,014 | INFO     | chi2: 0.006570177794620306
[2026-03-18 15:53:18] 2026-03-18 14:50:03,014 | INFO     | current chi2=0.006570177794620306 (change=99.40433971695087 %)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,014 | INFO     | sum of square deviations: 3346927870.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,015 | INFO     | sum of deviations: 3485197912.0000005
[2026-03-18 15:53:18] 2026-03-18 14:50:03,015 | INFO     | mean x: 1773838630.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,015 | INFO     | mean y: 2351572.28959276
[2026-03-18 15:53:18] 2026-03-18 14:50:03,015 | INFO     | intersect: -1844768810.8278785
[2026-03-18 15:53:18] 2026-03-18 14:50:03,015 | INFO     | chi2: 0.001330893332154939
[2026-03-18 15:53:18] 2026-03-18 14:50:03,015 | INFO     | current chi2=0.001330893332154939 (change=79.7434198318852 %)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,015 | INFO     | sum of square deviations: 3124858590.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | sum of deviations: 2949305378.4999995
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | mean x: 1773838782.5
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | mean y: 2351937.828703704
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | intersect: -1671833344.846485
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | chi2: 0.001179440715639742
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | current chi2=0.001179440715639742 (change=11.379771230048158 %)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | left removable region: 30
[2026-03-18 15:53:18] 2026-03-18 14:50:03,016 | INFO     | sum of square deviations: 2299168690.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,017 | INFO     | sum of deviations: 2971553756.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,017 | INFO     | mean x: 1773839057.0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,018 | INFO     | mean y: 2351747.0615384616
[2026-03-18 15:53:18] 2026-03-18 14:50:03,018 | INFO     | intersect: -2290241282.4511623
[2026-03-18 15:53:18] 2026-03-18 14:50:03,018 | INFO     | chi2: 0.0009402790053667434
[2026-03-18 15:53:18] 2026-03-18 14:50:03,018 | INFO     | current memory leak: 1.29 B/s (using 195 data points, chi2=0.00)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,018 | INFO     | could have reported an average CPU frequency of 3547 MHz (11 samples)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,018 | INFO     | ..............................
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . Timing measurements:
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . get job = 0 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . initial setup = 9 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . payload setup = 16 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . stage-in = 0 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . payload execution = 14095 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . stage-out = 0 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | . log creation = 0 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,019 | INFO     | ..............................
[2026-03-18 15:53:18] 2026-03-18 14:50:03,017 | INFO     | monitor loop #990: job 0:7056909316 is in state 'finished'
[2026-03-18 15:53:18] 2026-03-18 14:50:03,036 | WARNING  | exception caught: deque index out of range
[2026-03-18 15:53:18] 2026-03-18 14:50:03,337 | INFO     | 
[2026-03-18 15:53:18] 2026-03-18 14:50:03,337 | INFO     | job summary report
[2026-03-18 15:53:18] 2026-03-18 14:50:03,337 | INFO     | --------------------------------------------------
[2026-03-18 15:53:18] 2026-03-18 14:50:03,337 | INFO     | PanDA job id: 7056909316
[2026-03-18 15:53:18] 2026-03-18 14:50:03,337 | INFO     | task id: 49176925
[2026-03-18 15:53:18] 2026-03-18 14:50:03,337 | INFO     | errors: (none)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | pilot state: finished 
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | transexitcode: 0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | exeerrorcode: 0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | exeerrordiag: 
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | exitcode: 0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | exitmsg: OK
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | cpuconsumptiontime: 53687 s
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | nevents: 400
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | neventsw: 0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | pid: 3484505
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | pgrp: 3484505
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | corecount: 4
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | event service: False
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | sizes: {0: 2280363, 11: 2280363, 14116: 2311327, 14118: 2320405, 14121: 2320543}
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | --------------------------------------------------
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | 
[2026-03-18 15:53:18] 2026-03-18 14:50:03,338 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-18 15:53:18] 2026-03-18 14:50:03,361 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | job 7056909316 has completed (purged errors)
[2026-03-18 15:53:18] 2026-03-18 14:50:03,365 | INFO     | overall cleanup function is called
[2026-03-18 15:53:18] 2026-03-18 14:50:04,372 | INFO     | --- collectZombieJob: --- 10, [3484505]
[2026-03-18 15:53:18] 2026-03-18 14:50:04,372 | INFO     | zombie collector waiting for pid 3484505
[2026-03-18 15:53:18] 2026-03-18 14:50:04,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 15:53:18] 2026-03-18 14:50:04,372 | INFO     | collected zombie processes
[2026-03-18 15:53:18] 2026-03-18 14:50:04,372 | INFO     | will attempt to kill all subprocesses of pid=3484505
[2026-03-18 15:53:18] 2026-03-18 14:50:04,961 | INFO     | process IDs to be killed: [3484505] (in reverse order)
[2026-03-18 15:53:18] 2026-03-18 14:50:05,268 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 15:53:18] 2026-03-18 14:50:05,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 15:53:18] 2026-03-18 14:50:05,304 | INFO     | did not find any defunct processes belonging to 3484505
[2026-03-18 15:53:18] 2026-03-18 14:50:05,335 | INFO     | did not find any defunct processes belonging to 3484505
[2026-03-18 15:53:18] 2026-03-18 14:50:05,335 | INFO     | ready for new job
[2026-03-18 15:53:18] 2026-03-18 14:50:05,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 15:53:18] 2026-03-18 14:50:05,337 | INFO     | **************************************
[2026-03-18 15:53:18] 2026-03-18 14:50:05,337 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 15:53:18] 2026-03-18 14:50:05,337 | INFO     | **************************************
[2026-03-18 15:53:18] 2026-03-18 14:50:05,337 | INFO     | 
[2026-03-18 15:53:18] 2026-03-18 14:50:05,343 | INFO     | architecture information:
[2026-03-18 15:53:18] 2026-03-18 14:50:05,343 | INFO     | executing command: cat /etc/os-release
[2026-03-18 15:53:18] 2026-03-18 14:50:05,365 | INFO     | cat /etc/os-release:
[2026-03-18 15:53:18] NAME="CentOS Linux"
[2026-03-18 15:53:18] VERSION="7 (Core)"
[2026-03-18 15:53:18] ID="centos"
[2026-03-18 15:53:18] ID_LIKE="rhel fedora"
[2026-03-18 15:53:18] VERSION_ID="7"
[2026-03-18 15:53:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 15:53:18] ANSI_COLOR="0;31"
[2026-03-18 15:53:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 15:53:18] HOME_URL="https://www.centos.org/"
[2026-03-18 15:53:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 15:53:18] 
[2026-03-18 15:53:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 15:53:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 15:53:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 15:53:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 15:53:18] 
[2026-03-18 15:53:18] 2026-03-18 14:50:05,365 | INFO     | **************************************
[2026-03-18 15:53:18] 2026-03-18 14:50:05,867 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-18 15:53:18] 2026-03-18 14:50:05,881 | INFO     | sufficient remaining disk space (21356347392 B)
[2026-03-18 15:53:18] 2026-03-18 14:50:05,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 15:53:18] 2026-03-18 14:50:05,881 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 15:53:18] 2026-03-18 14:50:05,881 | INFO     | update_server=False
[2026-03-18 15:53:18] 2026-03-18 14:50:05,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 15:53:18] 2026-03-18 14:50:05,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 15:53:18] 2026-03-18 14:50:05,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 15:53:18] 2026-03-18 14:50:06,053 | INFO     | all payload control threads have been joined
[2026-03-18 15:53:18] 2026-03-18 14:50:06,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 15:53:18] 2026-03-18 14:50:06,544 | INFO     | aborting loop
[2026-03-18 15:53:18] 2026-03-18 14:50:06,733 | INFO     | all data control threads have been joined
[2026-03-18 15:53:18] 2026-03-18 14:50:06,890 | INFO     | [job] retrieve thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,059 | INFO     | [payload] control thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,196 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,232 | INFO     | [payload] validate_post thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,302 | INFO     | [data] copytool_in thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,549 | INFO     | [job] job monitor thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,557 | INFO     | all job control threads have been joined
[2026-03-18 15:53:18] 2026-03-18 14:50:07,610 | INFO     | [job] validate thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,738 | INFO     | [data] control thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:07,895 | INFO     | [data] copytool_out thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:08,037 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:08,071 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:08,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 15:53:18] 2026-03-18 14:50:08,358 | INFO     | [payload] failed_post thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:08,562 | INFO     | [job] control thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:09,087 | INFO     | [job] queue monitor thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:10,000 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:16,024 | INFO     | job.realtimelogging is not enabled
[2026-03-18 15:53:18] 2026-03-18 14:50:17,031 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 15:53:18] 2026-03-18 14:50:35,325 | INFO     | PID=3477691 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 15:53:18] 2026-03-18 14:50:35,329 | INFO     | .. there are 46 such processes running
[2026-03-18 15:53:18] 2026-03-18 14:50:35,329 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 15:53:18] 2026-03-18 14:50:35,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 15:53:18] 2026-03-18 14:50:35,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 15:53:18] 2026-03-18 14:50:54,152 | INFO     | [monitor] cgroup control has ended
[2026-03-18 15:53:18] 2026-03-18 14:50:55,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22918881060672)>', '<ExcThread(monitor, started 22918645171968)>']
[2026-03-18 15:53:18] 2026-03-18 14:50:56,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 15:53:18] 2026-03-18 14:50:56,434 | INFO     | [monitor] control thread has ended
[2026-03-18 15:53:18] 2026-03-18 14:51:00,808 | INFO     | all workflow threads have been joined
[2026-03-18 15:53:18] 2026-03-18 14:51:00,808 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 15:53:18] 2026-03-18 14:51:00,808 | INFO     | traces error code: 0
[2026-03-18 15:53:18] 2026-03-18 14:51:00,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 15:53:18] 2026-03-18 14:51:01,003 [wrapper] ==== pilot stdout END ====
[2026-03-18 15:53:18] 2026-03-18 14:51:01,006 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 15:53:18] 2026-03-18 14:51:01,029 [wrapper] pilotpid: 3477691
[2026-03-18 15:53:18] 2026-03-18 14:51:01,039 [wrapper] Pilot exit status: 0
[2026-03-18 15:53:18] 2026-03-18 14:51:01,124 [wrapper] pandaids: 7056909316
[2026-03-18 15:53:18] 2026-03-18 14:51:01,305 [wrapper] cleanup supervisor_pilot  357986 3477692
[2026-03-18 15:53:18] 2026-03-18 14:51:01,308 [wrapper] Test setup, not cleaning
[2026-03-18 15:53:18] 2026-03-18 14:51:01,319 [wrapper] apfmon messages muted
[2026-03-18 15:53:18] 2026-03-18 14:51:01,328 [wrapper] ==== wrapper stdout END ====
[2026-03-18 15:53:18] 2026-03-18 14:51:01,337 [wrapper] ==== wrapper stderr END ====
[2026-03-18 15:53:18]  *** Error codes and diagnostics ***
[2026-03-18 15:53:18]     "exeErrorCode": 0,
[2026-03-18 15:53:18]     "exeErrorDiag": "",
[2026-03-18 15:53:18]     "pilotErrorCode": 0,
[2026-03-18 15:53:18]     "pilotErrorDiag": "",
[2026-03-18 15:53:18]  *** Listing of results directory ***
[2026-03-18 15:53:18] total 487500
[2026-03-18 15:53:18] -rwx------. 1 boinc boinc     36322 Mar 16 14:15 runpilot2-wrapper.sh
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc       100 Mar 18 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 15:53:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 11:53 run_atlas
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc       105 Mar 18 11:53 job.xml
[2026-03-18 15:53:18] -rw-r--r--. 2 boinc boinc 244175426 Mar 18 11:54 EVNT.49135756._000003.pool.root.1
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc      6708 Mar 18 11:54 init_data.xml
[2026-03-18 15:53:18] -rw-r--r--. 2 boinc boinc     15845 Mar 18 11:54 start_atlas.sh
[2026-03-18 15:53:18] drwxrwx--x. 2 boinc boinc      4096 Mar 18 11:54 shared
[2026-03-18 15:53:18] -rw-r--r--. 2 boinc boinc    597556 Mar 18 11:54 input.tar.gz
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc         0 Mar 18 11:54 boinc_lockfile
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc      2668 Mar 18 11:54 pandaJob.out
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc   1011573 Mar 18 11:54 agis_schedconf.cvmfs.json
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc       444 Mar 18 11:54 workernode_map.json
[2026-03-18 15:53:18] drwx------. 5 boinc boinc      4096 Mar 18 11:54 pilot3
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc 246346724 Mar 18 15:49 HITS.49176925._000062.pool.root.1
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc       529 Mar 18 15:49 boinc_task_state.xml
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc        95 Mar 18 15:49 pilot_heartbeat.json
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc      1032 Mar 18 15:49 memory_monitor_summary.json
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc   1511579 Mar 18 15:49 agis_ddmendpoints.agis.ALL.json
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc    397270 Mar 18 15:49 log.49176925._000062.job.log.tgz.1
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc      6350 Mar 18 15:50 heartbeat.json
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc      4902 Mar 18 15:51 pilotlog.txt
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc   1968412 Mar 18 15:51 log.49176925._000062.job.log.1
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc       357 Mar 18 15:51 output.list
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc       620 Mar 18 15:51 runtime_log
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc   2385920 Mar 18 15:51 result.tar.gz
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc      9222 Mar 18 15:51 runtime_log.err
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc       665 Mar 18 15:51 ez7KDmuxMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBnwLDmTKJzwm.diag
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc        27 Mar 18 15:52 wrapper_checkpoint.txt
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc      8192 Mar 18 15:53 boinc_mmap_file
[2026-03-18 15:53:18] -rw-r--r--. 1 boinc boinc     20747 Mar 18 15:53 stderr.txt
[2026-03-18 15:53:18] HITS file was successfully produced:
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc 246346724 Mar 18 15:49 shared/HITS.pool.root.1
[2026-03-18 15:53:18]  *** Contents of shared directory: ***
[2026-03-18 15:53:18] total 481972
[2026-03-18 15:53:18] -rw-r--r--. 2 boinc boinc 244175426 Mar 18 11:54 ATLAS.root_0
[2026-03-18 15:53:18] -rw-r--r--. 2 boinc boinc     15845 Mar 18 11:54 start_atlas.sh
[2026-03-18 15:53:18] -rw-r--r--. 2 boinc boinc    597556 Mar 18 11:54 input.tar.gz
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc 246346724 Mar 18 15:49 HITS.pool.root.1
[2026-03-18 15:53:18] -rw-------. 1 boinc boinc   2385920 Mar 18 15:51 result.tar.gz
15:53:20 (3472884): run_atlas exited; CPU time 54382.620100
15:53:20 (3472884): called boinc_finish(0)

</stderr_txt>
]]>

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