Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:56:34 (3728726): wrapper (7.7.26015): starting
06:56:34 (3728726): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 06:56:34] Arguments: --nthreads 4
[2026-03-18 06:56:34] Threads: 4
[2026-03-18 06:56:34] Checking for CVMFS
[2026-03-18 06:56:34] No cvmfs_config command found, will try listing directly
[2026-03-18 06:56:34] CVMFS is ok
[2026-03-18 06:56:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 06:56:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 06:56:34] Further information can be found at the LHC@home message board.
[2026-03-18 06:56:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 06:56:34] Checking for apptainer binary...
[2026-03-18 06:56:34] which: no apptainer in ((null))
[2026-03-18 06:56:34] apptainer is not installed, using version from CVMFS
[2026-03-18 06:56:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 06:56:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/16/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-18 06:56:34] apptainer works
[2026-03-18 06:56:34] Set ATHENA_PROC_NUMBER=4
[2026-03-18 06:56:34] Set ATHENA_CORE_NUMBER=4
[2026-03-18 06:56:34] Starting ATLAS job with PandaID=7056903384
[2026-03-18 06:56:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 10:25:22]  *** The last 200 lines of the pilot log: ***
[2026-03-18 10:25:22] 2026-03-18 09:24:26,943 | INFO     | log transfer has been attempted: DONE
[2026-03-18 10:25:22] 2026-03-18 09:24:26,943 | INFO     | job 7056903384 has finished - writing final server update
[2026-03-18 10:25:22] 2026-03-18 09:24:26,943 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2681891/.job.ad'
[2026-03-18 10:25:22] 2026-03-18 09:24:26,943 | INFO     | total number of processed events: 400 (read)
[2026-03-18 10:25:22] 2026-03-18 09:24:26,971 | INFO     | using path: /var/lib/boinc/var/slot68/slots/16/PanDA_Pilot-7056903384/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 10:25:22] 2026-03-18 09:24:26,971 | INFO     | extracted standard info from prmon json
[2026-03-18 10:25:22] 2026-03-18 09:24:26,971 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 10:25:22] 2026-03-18 09:24:26,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 10:25:22] 2026-03-18 09:24:26,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 10:25:22] 2026-03-18 09:24:26,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 10:25:22] 2026-03-18 09:24:26,974 | INFO     | fitting pss+swap vs Time
[2026-03-18 10:25:22] 2026-03-18 09:24:26,974 | INFO     | sum of square deviations: 2632440055.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,975 | INFO     | sum of deviations: 23456005053.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,975 | INFO     | mean x: 1773819633.5
[2026-03-18 10:25:22] 2026-03-18 09:24:26,975 | INFO     | mean y: 2341558.4803921566
[2026-03-18 10:25:22] 2026-03-18 09:24:26,975 | INFO     | intersect: -15803041058.859629
[2026-03-18 10:25:22] 2026-03-18 09:24:26,975 | INFO     | chi2: 1.0954630597657633
[2026-03-18 10:25:22] 2026-03-18 09:24:26,975 | INFO     | sum of square deviations: 2443580700.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | sum of deviations: 22752255861.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | mean x: 1773819481.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | mean y: 2340990.105527638
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | intersect: -16513747339.998825
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | chi2: 1.0959357120450646
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | current chi2=1.0959357120450646 (change=-0.04314634574737109 %)
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | right removable region: 198
[2026-03-18 10:25:22] 2026-03-18 09:24:26,976 | INFO     | sum of square deviations: 2443580700.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,977 | INFO     | sum of deviations: 2762955106.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,977 | INFO     | mean x: 1773819786.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,977 | INFO     | mean y: 2358021.206030151
[2026-03-18 10:25:22] 2026-03-18 09:24:26,977 | INFO     | intersect: -2003298855.5455859
[2026-03-18 10:25:22] 2026-03-18 09:24:26,977 | INFO     | chi2: 0.0015196353531661093
[2026-03-18 10:25:22] 2026-03-18 09:24:26,977 | INFO     | current chi2=0.0015196353531661093 (change=99.86127917873459 %)
[2026-03-18 10:25:22] 2026-03-18 09:24:26,977 | INFO     | sum of square deviations: 2263977332.5
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | sum of deviations: 2546520029.999997
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | mean x: 1773819938.5
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | mean y: 2358201.3402061854
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | intersect: -1992833154.2267838
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | chi2: 0.001425931149252435
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | current chi2=0.001425931149252435 (change=6.166229531212524 %)
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | left removable region: 20
[2026-03-18 10:25:22] 2026-03-18 09:24:26,978 | INFO     | sum of square deviations: 1748737904.5
[2026-03-18 10:25:22] 2026-03-18 09:24:26,979 | INFO     | sum of deviations: 2920274350.0
[2026-03-18 10:25:22] 2026-03-18 09:24:26,979 | INFO     | mean x: 1773820060.5
[2026-03-18 10:25:22] 2026-03-18 09:24:26,979 | INFO     | mean y: 2357439.7303370787
[2026-03-18 10:25:22] 2026-03-18 09:24:26,979 | INFO     | intersect: -2959802419.0248704
[2026-03-18 10:25:22] 2026-03-18 09:24:26,979 | INFO     | chi2: 0.0005539222581593202
[2026-03-18 10:25:22] 2026-03-18 09:24:26,979 | INFO     | current memory leak: 1.67 B/s (using 178 data points, chi2=0.00)
[2026-03-18 10:25:22] 2026-03-18 09:24:26,979 | INFO     | could have reported an average CPU frequency of 3542 MHz (10 samples)
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | ..............................
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . Timing measurements:
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . get job = 0 s
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . initial setup = 7 s
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . payload setup = 9 s
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . stage-in = 0 s
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . payload execution = 12426 s
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . stage-out = 1 s
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | . log creation = 0 s
[2026-03-18 10:25:22] 2026-03-18 09:24:26,980 | INFO     | ..............................
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | 
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | job summary report
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | --------------------------------------------------
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | PanDA job id: 7056903384
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | task id: 49176616
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | errors: (none)
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | pilot state: finished 
[2026-03-18 10:25:22] 2026-03-18 09:24:27,472 | INFO     | transexitcode: 0
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | exeerrorcode: 0
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | exeerrordiag: 
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | exitcode: 0
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | exitmsg: OK
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | cpuconsumptiontime: 45308 s
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | nevents: 400
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | neventsw: 0
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | pid: 3751626
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | pgrp: 3751626
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | corecount: 4
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | event service: False
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | sizes: {0: 2279866, 1: 2280327, 12: 2280327, 12439: 2310423, 12440: 2319445, 12441: 2319823}
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | --------------------------------------------------
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | 
[2026-03-18 10:25:22] 2026-03-18 09:24:27,473 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/16
[2026-03-18 10:25:22] 2026-03-18 09:24:27,511 | INFO     | time since job start (12453s) is within the limit (345600.0s)
[2026-03-18 10:25:22] 2026-03-18 09:24:27,533 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | job 7056903384 has completed (purged errors)
[2026-03-18 10:25:22] 2026-03-18 09:24:27,534 | INFO     | overall cleanup function is called
[2026-03-18 10:25:22] 2026-03-18 09:24:28,542 | INFO     | --- collectZombieJob: --- 10, [3751626]
[2026-03-18 10:25:22] 2026-03-18 09:24:28,542 | INFO     | zombie collector waiting for pid 3751626
[2026-03-18 10:25:22] 2026-03-18 09:24:28,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 10:25:22] 2026-03-18 09:24:28,542 | INFO     | collected zombie processes
[2026-03-18 10:25:22] 2026-03-18 09:24:28,542 | INFO     | will attempt to kill all subprocesses of pid=3751626
[2026-03-18 10:25:22] 2026-03-18 09:24:29,326 | INFO     | process IDs to be killed: [3751626] (in reverse order)
[2026-03-18 10:25:22] 2026-03-18 09:24:29,808 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 10:25:22] 2026-03-18 09:24:29,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 10:25:22] 2026-03-18 09:24:29,840 | INFO     | did not find any defunct processes belonging to 3751626
[2026-03-18 10:25:22] 2026-03-18 09:24:29,870 | INFO     | did not find any defunct processes belonging to 3751626
[2026-03-18 10:25:22] 2026-03-18 09:24:29,870 | INFO     | ready for new job
[2026-03-18 10:25:22] 2026-03-18 09:24:29,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 10:25:22] 2026-03-18 09:24:29,871 | INFO     | **************************************
[2026-03-18 10:25:22] 2026-03-18 09:24:29,872 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 10:25:22] 2026-03-18 09:24:29,872 | INFO     | **************************************
[2026-03-18 10:25:22] 2026-03-18 09:24:29,872 | INFO     | 
[2026-03-18 10:25:22] 2026-03-18 09:24:29,877 | INFO     | architecture information:
[2026-03-18 10:25:22] 2026-03-18 09:24:29,877 | INFO     | executing command: cat /etc/os-release
[2026-03-18 10:25:22] 2026-03-18 09:24:29,915 | INFO     | cat /etc/os-release:
[2026-03-18 10:25:22] NAME="CentOS Linux"
[2026-03-18 10:25:22] VERSION="7 (Core)"
[2026-03-18 10:25:22] ID="centos"
[2026-03-18 10:25:22] ID_LIKE="rhel fedora"
[2026-03-18 10:25:22] VERSION_ID="7"
[2026-03-18 10:25:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 10:25:22] ANSI_COLOR="0;31"
[2026-03-18 10:25:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 10:25:22] HOME_URL="https://www.centos.org/"
[2026-03-18 10:25:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 10:25:22] 
[2026-03-18 10:25:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 10:25:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 10:25:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 10:25:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 10:25:22] 
[2026-03-18 10:25:22] 2026-03-18 09:24:29,915 | INFO     | **************************************
[2026-03-18 10:25:22] 2026-03-18 09:24:30,419 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/16
[2026-03-18 10:25:22] 2026-03-18 09:24:30,473 | INFO     | sufficient remaining disk space (3227516928 B)
[2026-03-18 10:25:22] 2026-03-18 09:24:30,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 10:25:22] 2026-03-18 09:24:30,473 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 10:25:22] 2026-03-18 09:24:30,473 | INFO     | update_server=False
[2026-03-18 10:25:22] 2026-03-18 09:24:30,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 10:25:22] 2026-03-18 09:24:30,493 | INFO     | all data control threads have been joined
[2026-03-18 10:25:22] 2026-03-18 09:24:30,865 | WARNING  | process 3751626 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 10:25:22] 2026-03-18 09:24:31,054 | INFO     | all payload control threads have been joined
[2026-03-18 10:25:22] 2026-03-18 09:24:31,238 | INFO     | using path: /var/lib/boinc/var/slot68/slots/16/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 10:25:22] 2026-03-18 09:24:31,479 | INFO     | [job] retrieve thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:31,496 | INFO     | [job] validate thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:31,511 | INFO     | [data] control thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:31,516 | INFO     | [payload] failed_post thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:31,520 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:31,876 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 10:25:22] 2026-03-18 09:24:31,882 | INFO     | number of running child processes to parent process 3751626: 1
[2026-03-18 10:25:22] 2026-03-18 09:24:31,883 | INFO     | maximum number of monitored processes: 6
[2026-03-18 10:25:22] 2026-03-18 09:24:31,883 | INFO     | aborting job monitoring since job object (job id=7056903384) has expired
[2026-03-18 10:25:22] 2026-03-18 09:24:31,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:25:22] 2026-03-18 09:24:31,883 | INFO     | will abort loop
[2026-03-18 10:25:22] 2026-03-18 09:24:32,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:25:22] 2026-03-18 09:24:32,067 | INFO     | [payload] control thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:32,105 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:32,192 | INFO     | all job control threads have been joined
[2026-03-18 10:25:22] 2026-03-18 09:24:32,195 | INFO     | [data] copytool_in thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:32,200 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:32,711 | INFO     | [payload] validate_post thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:32,888 | INFO     | [job] job monitor thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:32,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 10:25:22] 2026-03-18 09:24:33,049 | INFO     | [job] queue monitor thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:33,198 | INFO     | [job] control thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:33,883 | INFO     | [data] copytool_out thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:36,965 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:24:41,394 | INFO     | job.realtimelogging is not enabled
[2026-03-18 10:25:22] 2026-03-18 09:24:42,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 10:25:22] 2026-03-18 09:25:01,476 | INFO     | PID=3737260 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 10:25:22] 2026-03-18 09:25:01,477 | INFO     | .. there are 48 such processes running
[2026-03-18 10:25:22] 2026-03-18 09:25:01,477 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 10:25:22] 2026-03-18 09:25:01,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 10:25:22] 2026-03-18 09:25:01,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 10:25:22] 2026-03-18 09:25:15,369 | INFO     | [monitor] cgroup control has ended
[2026-03-18 10:25:22] 2026-03-18 09:25:17,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22851002316608)>', '<ExcThread(monitor, started 22850691901184)>']
[2026-03-18 10:25:22] 2026-03-18 09:25:17,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 10:25:22] 2026-03-18 09:25:17,592 | INFO     | [monitor] control thread has ended
[2026-03-18 10:25:22] 2026-03-18 09:25:22,092 | INFO     | all workflow threads have been joined
[2026-03-18 10:25:22] 2026-03-18 09:25:22,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 10:25:22] 2026-03-18 09:25:22,092 | INFO     | traces error code: 0
[2026-03-18 10:25:22] 2026-03-18 09:25:22,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 10:25:22] 2026-03-18 09:25:22,346 [wrapper] ==== pilot stdout END ====
[2026-03-18 10:25:22] 2026-03-18 09:25:22,373 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 10:25:22] 2026-03-18 09:25:22,397 [wrapper] pilotpid: 3737260
[2026-03-18 10:25:22] 2026-03-18 09:25:22,437 [wrapper] Pilot exit status: 0
[2026-03-18 10:25:22] 2026-03-18 09:25:22,518 [wrapper] pandaids: 7056903384
[2026-03-18 10:25:22] 2026-03-18 09:25:22,673 [wrapper] cleanup supervisor_pilot  562192 3737261
[2026-03-18 10:25:22] 2026-03-18 09:25:22,675 [wrapper] Test setup, not cleaning
[2026-03-18 10:25:22] 2026-03-18 09:25:22,677 [wrapper] apfmon messages muted
[2026-03-18 10:25:22] 2026-03-18 09:25:22,678 [wrapper] ==== wrapper stdout END ====
[2026-03-18 10:25:22] 2026-03-18 09:25:22,680 [wrapper] ==== wrapper stderr END ====
[2026-03-18 10:25:22]  *** Error codes and diagnostics ***
[2026-03-18 10:25:22]     "exeErrorCode": 0,
[2026-03-18 10:25:22]     "exeErrorDiag": "",
[2026-03-18 10:25:22]     "pilotErrorCode": 0,
[2026-03-18 10:25:22]     "pilotErrorDiag": "",
[2026-03-18 10:25:22]  *** Listing of results directory ***
[2026-03-18 10:25:22] total 485840
[2026-03-18 10:25:22] -rwx------. 1 boinc boinc     36322 Mar 16 14:16 runpilot2-wrapper.sh
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc       100 Mar 18 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 10:25:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 06:56 run_atlas
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc       105 Mar 18 06:56 job.xml
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc      6708 Mar 18 06:56 init_data.xml
[2026-03-18 10:25:22] -rw-r--r--. 2 boinc boinc 249324892 Mar 18 06:56 EVNT.49134569._000008.pool.root.1
[2026-03-18 10:25:22] -rw-r--r--. 2 boinc boinc     15845 Mar 18 06:56 start_atlas.sh
[2026-03-18 10:25:22] drwxrwx--x. 2 boinc boinc      4096 Mar 18 06:56 shared
[2026-03-18 10:25:22] -rw-r--r--. 2 boinc boinc    597549 Mar 18 06:56 input.tar.gz
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc         0 Mar 18 06:56 boinc_lockfile
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc      2606 Mar 18 06:56 pandaJob.out
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc   1011499 Mar 18 06:56 agis_schedconf.cvmfs.json
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc       443 Mar 18 06:56 workernode_map.json
[2026-03-18 10:25:22] drwx------. 5 boinc boinc      4096 Mar 18 06:56 pilot3
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc 240054855 Mar 18 10:23 HITS.49176616._000195.pool.root.1
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc       530 Mar 18 10:24 boinc_task_state.xml
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc      1032 Mar 18 10:24 memory_monitor_summary.json
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc   1511579 Mar 18 10:24 agis_ddmendpoints.agis.ALL.json
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc    380722 Mar 18 10:24 log.49176616._000195.job.log.tgz.1
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc      6350 Mar 18 10:24 heartbeat.json
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc        95 Mar 18 10:25 pilot_heartbeat.json
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc      8192 Mar 18 10:25 boinc_mmap_file
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc        28 Mar 18 10:25 wrapper_checkpoint.txt
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc      5434 Mar 18 10:25 pilotlog.txt
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc   1706868 Mar 18 10:25 log.49176616._000195.job.log.1
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc       357 Mar 18 10:25 output.list
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc       620 Mar 18 10:25 runtime_log
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc   2109440 Mar 18 10:25 result.tar.gz
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc      9222 Mar 18 10:25 runtime_log.err
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc       665 Mar 18 10:25 41NNDmhzMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZdtLDmEZHyFo.diag
[2026-03-18 10:25:22] -rw-r--r--. 1 boinc boinc     21096 Mar 18 10:25 stderr.txt
[2026-03-18 10:25:22] HITS file was successfully produced:
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc 240054855 Mar 18 10:23 shared/HITS.pool.root.1
[2026-03-18 10:25:22]  *** Contents of shared directory: ***
[2026-03-18 10:25:22] total 480584
[2026-03-18 10:25:22] -rw-r--r--. 2 boinc boinc 249324892 Mar 18 06:56 ATLAS.root_0
[2026-03-18 10:25:22] -rw-r--r--. 2 boinc boinc     15845 Mar 18 06:56 start_atlas.sh
[2026-03-18 10:25:22] -rw-r--r--. 2 boinc boinc    597549 Mar 18 06:56 input.tar.gz
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc 240054855 Mar 18 10:23 HITS.pool.root.1
[2026-03-18 10:25:22] -rw-------. 1 boinc boinc   2109440 Mar 18 10:25 result.tar.gz
10:25:24 (3728726): run_atlas exited; CPU time 45911.024107
10:25:24 (3728726): called boinc_finish(0)

</stderr_txt>
]]>

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