Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:57 (3298478): wrapper (7.7.26015): starting
05:13:57 (3298478): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 05:13:57] Arguments: --nthreads 4
[2026-03-18 05:13:57] Threads: 4
[2026-03-18 05:13:57] Checking for CVMFS
[2026-03-18 05:13:57] No cvmfs_config command found, will try listing directly
[2026-03-18 05:13:57] CVMFS is ok
[2026-03-18 05:13:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 05:13:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 05:13:57] Further information can be found at the LHC@home message board.
[2026-03-18 05:13:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 05:13:57] Checking for apptainer binary...
[2026-03-18 05:13:57] which: no apptainer in ((null))
[2026-03-18 05:13:57] apptainer is not installed, using version from CVMFS
[2026-03-18 05:13:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 05:13:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-18 05:13:57] apptainer works
[2026-03-18 05:13:57] Set ATHENA_PROC_NUMBER=4
[2026-03-18 05:13:57] Set ATHENA_CORE_NUMBER=4
[2026-03-18 05:13:57] Starting ATLAS job with PandaID=7056907304
[2026-03-18 05:13:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 08:55:43]  *** The last 200 lines of the pilot log: ***
[2026-03-18 08:55:43] 2026-03-18 07:54:42,528 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 08:55:43] 2026-03-18 07:54:42,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 08:55:43] 2026-03-18 07:54:42,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 08:55:43] 2026-03-18 07:54:42,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 08:55:43] 2026-03-18 07:54:42,531 | INFO     | fitting pss+swap vs Time
[2026-03-18 08:55:43] 2026-03-18 07:54:42,531 | INFO     | sum of square deviations: 3168461268.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,532 | INFO     | sum of deviations: 8676490489.000006
[2026-03-18 08:55:43] 2026-03-18 07:54:42,532 | INFO     | mean x: 1773813871.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,532 | INFO     | mean y: 2325986.949308756
[2026-03-18 08:55:43] 2026-03-18 07:54:42,532 | INFO     | intersect: -4855072566.861192
[2026-03-18 08:55:43] 2026-03-18 07:54:42,532 | INFO     | chi2: 1.8500608978853466
[2026-03-18 08:55:43] 2026-03-18 07:54:42,533 | INFO     | sum of square deviations: 2954447953.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,533 | INFO     | sum of deviations: 22020107509.000004
[2026-03-18 08:55:43] 2026-03-18 07:54:42,533 | INFO     | mean x: 1773813718.5
[2026-03-18 08:55:43] 2026-03-18 07:54:42,533 | INFO     | mean y: 2335312.0566037735
[2026-03-18 08:55:43] 2026-03-18 07:54:42,534 | INFO     | intersect: -13218262716.298328
[2026-03-18 08:55:43] 2026-03-18 07:54:42,534 | INFO     | chi2: 1.038566735635794
[2026-03-18 08:55:43] 2026-03-18 07:54:42,534 | INFO     | current chi2=1.038566735635794 (change=43.863105434913265 %)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,534 | INFO     | sum of square deviations: 2750295288.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | sum of deviations: 21366314083.99996
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | mean x: 1773813566.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | mean y: 2334823.6618357487
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | intersect: -13777951948.809265
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | chi2: 1.039005547162053
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | current chi2=1.039005547162053 (change=-0.04225164461775163 %)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | right removable region: 206
[2026-03-18 08:55:43] 2026-03-18 07:54:42,535 | INFO     | sum of square deviations: 2954447953.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,536 | INFO     | sum of deviations: -7042063504.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,536 | INFO     | mean x: 1773814023.5
[2026-03-18 08:55:43] 2026-03-18 07:54:42,536 | INFO     | mean y: 2336975.6886792453
[2026-03-18 08:55:43] 2026-03-18 07:54:42,536 | INFO     | intersect: 4230304838.5474052
[2026-03-18 08:55:43] 2026-03-18 07:54:42,536 | INFO     | chi2: 0.8328037553996201
[2026-03-18 08:55:43] 2026-03-18 07:54:42,536 | INFO     | current chi2=0.8328037553996201 (change=54.98506258083017 %)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,536 | INFO     | sum of square deviations: 2750295288.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | sum of deviations: -7210161082.000001
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | mean x: 1773814176.0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | mean y: 2337115.270531401
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | intersect: 4652559945.632702
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | chi2: 0.828373361193203
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | current chi2=0.828373361193203 (change=0.531985378030769 %)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | left removable region: 20
[2026-03-18 08:55:43] 2026-03-18 07:54:42,537 | INFO     | sum of square deviations: 1995283922.5
[2026-03-18 08:55:43] 2026-03-18 07:54:42,538 | INFO     | sum of deviations: 3732002783.5000005
[2026-03-18 08:55:43] 2026-03-18 07:54:42,538 | INFO     | mean x: 1773814145.5
[2026-03-18 08:55:43] 2026-03-18 07:54:42,538 | INFO     | mean y: 2348562.7795698927
[2026-03-18 08:55:43] 2026-03-18 07:54:42,538 | INFO     | intersect: -3315414515.3307705
[2026-03-18 08:55:43] 2026-03-18 07:54:42,538 | INFO     | chi2: 0.00013542128692062763
[2026-03-18 08:55:43] 2026-03-18 07:54:42,538 | INFO     | current memory leak: 1.87 B/s (using 186 data points, chi2=0.00)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | could have reported an average CPU frequency of 3550 MHz (11 samples)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | ..............................
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . Timing measurements:
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . get job = 0 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . initial setup = 5 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . payload setup = 10 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . stage-in = 0 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . payload execution = 13198 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . stage-out = 0 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | . log creation = 0 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,539 | INFO     | ..............................
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | 
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | job summary report
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | --------------------------------------------------
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | PanDA job id: 7056907304
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | task id: 49176822
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | errors: (none)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | pilot state: finished 
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | transexitcode: 0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | exeerrorcode: 0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | exeerrordiag: 
[2026-03-18 08:55:43] 2026-03-18 07:54:42,860 | INFO     | exitcode: 0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | exitmsg: OK
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | cpuconsumptiontime: 49630 s
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | nevents: 400
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | neventsw: 0
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | pid: 3309950
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | pgrp: 3309950
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | corecount: 4
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | event service: False
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | sizes: {0: 2280291, 11: 2280291, 13212: 2310943, 13213: 2320019, 13215: 2320157}
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | --------------------------------------------------
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | 
[2026-03-18 08:55:43] 2026-03-18 07:54:42,861 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/8
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,880 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,880 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 08:55:43] 2026-03-18 07:54:42,880 | INFO     | job 7056907304 has completed (purged errors)
[2026-03-18 08:55:43] 2026-03-18 07:54:42,880 | INFO     | overall cleanup function is called
[2026-03-18 08:55:43] 2026-03-18 07:54:43,886 | INFO     | --- collectZombieJob: --- 10, [3309950]
[2026-03-18 08:55:43] 2026-03-18 07:54:43,886 | INFO     | zombie collector waiting for pid 3309950
[2026-03-18 08:55:43] 2026-03-18 07:54:43,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 08:55:43] 2026-03-18 07:54:43,886 | INFO     | collected zombie processes
[2026-03-18 08:55:43] 2026-03-18 07:54:43,886 | INFO     | will attempt to kill all subprocesses of pid=3309950
[2026-03-18 08:55:43] 2026-03-18 07:54:44,471 | INFO     | process IDs to be killed: [3309950] (in reverse order)
[2026-03-18 08:55:43] 2026-03-18 07:54:44,777 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 08:55:43] 2026-03-18 07:54:44,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 08:55:43] 2026-03-18 07:54:44,808 | INFO     | did not find any defunct processes belonging to 3309950
[2026-03-18 08:55:43] 2026-03-18 07:54:44,839 | INFO     | did not find any defunct processes belonging to 3309950
[2026-03-18 08:55:43] 2026-03-18 07:54:44,840 | INFO     | ready for new job
[2026-03-18 08:55:43] 2026-03-18 07:54:44,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 08:55:43] 2026-03-18 07:54:44,841 | INFO     | **************************************
[2026-03-18 08:55:43] 2026-03-18 07:54:44,841 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 08:55:43] 2026-03-18 07:54:44,841 | INFO     | **************************************
[2026-03-18 08:55:43] 2026-03-18 07:54:44,841 | INFO     | 
[2026-03-18 08:55:43] 2026-03-18 07:54:44,846 | INFO     | architecture information:
[2026-03-18 08:55:43] 2026-03-18 07:54:44,847 | INFO     | executing command: cat /etc/os-release
[2026-03-18 08:55:43] 2026-03-18 07:54:44,878 | INFO     | cat /etc/os-release:
[2026-03-18 08:55:43] NAME="CentOS Linux"
[2026-03-18 08:55:43] VERSION="7 (Core)"
[2026-03-18 08:55:43] ID="centos"
[2026-03-18 08:55:43] ID_LIKE="rhel fedora"
[2026-03-18 08:55:43] VERSION_ID="7"
[2026-03-18 08:55:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 08:55:43] ANSI_COLOR="0;31"
[2026-03-18 08:55:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 08:55:43] HOME_URL="https://www.centos.org/"
[2026-03-18 08:55:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 08:55:43] 
[2026-03-18 08:55:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 08:55:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 08:55:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 08:55:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 08:55:43] 
[2026-03-18 08:55:43] 2026-03-18 07:54:44,878 | INFO     | **************************************
[2026-03-18 08:55:43] 2026-03-18 07:54:45,380 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/8
[2026-03-18 08:55:43] 2026-03-18 07:54:45,408 | INFO     | sufficient remaining disk space (5954863104 B)
[2026-03-18 08:55:43] 2026-03-18 07:54:45,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 08:55:43] 2026-03-18 07:54:45,409 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 08:55:43] 2026-03-18 07:54:45,409 | INFO     | update_server=False
[2026-03-18 08:55:43] 2026-03-18 07:54:45,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 08:55:43] 2026-03-18 07:54:45,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 08:55:43] 2026-03-18 07:54:45,509 | INFO     | all data control threads have been joined
[2026-03-18 08:55:43] 2026-03-18 07:54:45,595 | INFO     | job.realtimelogging is not enabled
[2026-03-18 08:55:43] 2026-03-18 07:54:46,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 08:55:43] 2026-03-18 07:54:46,057 | INFO     | all job control threads have been joined
[2026-03-18 08:55:43] 2026-03-18 07:54:46,268 | WARNING  | process 3309950 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 08:55:43] 2026-03-18 07:54:46,414 | INFO     | [job] retrieve thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:46,425 | INFO     | all payload control threads have been joined
[2026-03-18 08:55:43] 2026-03-18 07:54:46,451 | INFO     | [payload] failed_post thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:46,522 | INFO     | [data] control thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:46,563 | INFO     | [payload] validate_post thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:46,600 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:46,613 | INFO     | using path: /var/lib/boinc/var/slot72/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 08:55:43] 2026-03-18 07:54:46,682 | INFO     | [data] copytool_in thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:46,934 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:47,062 | INFO     | [job] control thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:47,227 | INFO     | number of running child processes to parent process 3309950: 1
[2026-03-18 08:55:43] 2026-03-18 07:54:47,227 | INFO     | maximum number of monitored processes: 6
[2026-03-18 08:55:43] 2026-03-18 07:54:47,227 | INFO     | aborting job monitoring since job object (job id=7056907304) has expired
[2026-03-18 08:55:43] 2026-03-18 07:54:47,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:55:43] 2026-03-18 07:54:47,227 | INFO     | will abort loop
[2026-03-18 08:55:43] 2026-03-18 07:54:47,430 | INFO     | [payload] control thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:47,506 | INFO     | [data] copytool_out thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:47,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:55:43] 2026-03-18 07:54:47,612 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:47,633 | INFO     | [job] validate thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:47,873 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:48,232 | INFO     | [job] job monitor thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:48,606 | INFO     | [job] queue monitor thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:54:50,058 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 08:55:43] 2026-03-18 07:55:15,664 | INFO     | PID=3303495 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 08:55:43] 2026-03-18 07:55:15,664 | INFO     | .. there are 51 such processes running
[2026-03-18 08:55:43] 2026-03-18 07:55:15,664 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 08:55:43] 2026-03-18 07:55:15,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 08:55:43] 2026-03-18 07:55:15,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 08:55:43] 2026-03-18 07:55:38,033 | INFO     | [monitor] cgroup control has ended
[2026-03-18 08:55:43] 2026-03-18 07:55:38,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23276257621824)>', '<ExcThread(monitor, started 23276018743040)>']
[2026-03-18 08:55:43] 2026-03-18 07:55:38,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 08:55:43] 2026-03-18 07:55:38,785 | INFO     | [monitor] control thread has ended
[2026-03-18 08:55:43] 2026-03-18 07:55:43,105 | INFO     | all workflow threads have been joined
[2026-03-18 08:55:43] 2026-03-18 07:55:43,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 08:55:43] 2026-03-18 07:55:43,105 | INFO     | traces error code: 0
[2026-03-18 08:55:43] 2026-03-18 07:55:43,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 08:55:43] 2026-03-18 07:55:43,276 [wrapper] ==== pilot stdout END ====
[2026-03-18 08:55:43] 2026-03-18 07:55:43,285 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 08:55:43] 2026-03-18 07:55:43,311 [wrapper] pilotpid: 3303495
[2026-03-18 08:55:43] 2026-03-18 07:55:43,318 [wrapper] Pilot exit status: 0
[2026-03-18 08:55:43] 2026-03-18 07:55:43,358 [wrapper] pandaids: 7056907304
[2026-03-18 08:55:43] 2026-03-18 07:55:43,535 [wrapper] cleanup supervisor_pilot   91667 3303496
[2026-03-18 08:55:43] 2026-03-18 07:55:43,538 [wrapper] Test setup, not cleaning
[2026-03-18 08:55:43] 2026-03-18 07:55:43,539 [wrapper] apfmon messages muted
[2026-03-18 08:55:43] 2026-03-18 07:55:43,541 [wrapper] ==== wrapper stdout END ====
[2026-03-18 08:55:43] 2026-03-18 07:55:43,544 [wrapper] ==== wrapper stderr END ====
[2026-03-18 08:55:43]  *** Error codes and diagnostics ***
[2026-03-18 08:55:43]     "exeErrorCode": 0,
[2026-03-18 08:55:43]     "exeErrorDiag": "",
[2026-03-18 08:55:43]     "pilotErrorCode": 0,
[2026-03-18 08:55:43]     "pilotErrorDiag": "",
[2026-03-18 08:55:43]  *** Listing of results directory ***
[2026-03-18 08:55:43] total 488100
[2026-03-18 08:55:43] -rwx------. 1 boinc boinc     36322 Mar 16 14:14 runpilot2-wrapper.sh
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc       100 Mar 18 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 08:55:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 05:13 run_atlas
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc       105 Mar 18 05:13 job.xml
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc      6706 Mar 18 05:13 init_data.xml
[2026-03-18 08:55:43] -rw-r--r--. 2 boinc boinc 247637611 Mar 18 05:13 EVNT.49135364._000008.pool.root.1
[2026-03-18 08:55:43] -rw-r--r--. 2 boinc boinc     15845 Mar 18 05:13 start_atlas.sh
[2026-03-18 08:55:43] drwxrwx--x. 2 boinc boinc      4096 Mar 18 05:13 shared
[2026-03-18 08:55:43] -rw-r--r--. 2 boinc boinc    597536 Mar 18 05:13 input.tar.gz
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc         0 Mar 18 05:13 boinc_lockfile
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc      2597 Mar 18 05:13 pandaJob.out
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc   1011515 Mar 18 05:14 agis_schedconf.cvmfs.json
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc       444 Mar 18 05:14 workernode_map.json
[2026-03-18 08:55:43] drwx------. 5 boinc boinc      4096 Mar 18 05:14 pilot3
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc 243757563 Mar 18 08:54 HITS.49176822._000188.pool.root.1
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc       530 Mar 18 08:54 boinc_task_state.xml
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc      1032 Mar 18 08:54 memory_monitor_summary.json
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc   1511579 Mar 18 08:54 agis_ddmendpoints.agis.ALL.json
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc    389328 Mar 18 08:54 log.49176822._000188.job.log.tgz.1
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc      6352 Mar 18 08:54 heartbeat.json
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc        95 Mar 18 08:55 pilot_heartbeat.json
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc      8192 Mar 18 08:55 boinc_mmap_file
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc        28 Mar 18 08:55 wrapper_checkpoint.txt
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc      5432 Mar 18 08:55 pilotlog.txt
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc   1849853 Mar 18 08:55 log.49176822._000188.job.log.1
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc       357 Mar 18 08:55 output.list
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc       620 Mar 18 08:55 runtime_log
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc   2252800 Mar 18 08:55 result.tar.gz
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc      9205 Mar 18 08:55 runtime_log.err
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc       665 Mar 18 08:55 XmaLDmUxMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpjwLDmIUSUjm.diag
[2026-03-18 08:55:43] -rw-r--r--. 1 boinc boinc     20842 Mar 18 08:55 stderr.txt
[2026-03-18 08:55:43] HITS file was successfully produced:
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc 243757563 Mar 18 08:54 shared/HITS.pool.root.1
[2026-03-18 08:55:43]  *** Contents of shared directory: ***
[2026-03-18 08:55:43] total 482692
[2026-03-18 08:55:43] -rw-r--r--. 2 boinc boinc 247637611 Mar 18 05:13 ATLAS.root_0
[2026-03-18 08:55:43] -rw-r--r--. 2 boinc boinc     15845 Mar 18 05:13 start_atlas.sh
[2026-03-18 08:55:43] -rw-r--r--. 2 boinc boinc    597536 Mar 18 05:13 input.tar.gz
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc 243757563 Mar 18 08:54 HITS.pool.root.1
[2026-03-18 08:55:43] -rw-------. 1 boinc boinc   2252800 Mar 18 08:55 result.tar.gz
08:55:45 (3298478): run_atlas exited; CPU time 50264.657558
08:55:45 (3298478): called boinc_finish(0)

</stderr_txt>
]]>

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