Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:58:45 (3095693): wrapper (7.7.26015): starting
14:58:45 (3095693): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 14:58:45] Arguments: --nthreads 4
[2026-03-16 14:58:45] Threads: 4
[2026-03-16 14:58:45] Checking for CVMFS
[2026-03-16 14:58:45] No cvmfs_config command found, will try listing directly
[2026-03-16 14:58:45] CVMFS is ok
[2026-03-16 14:58:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 14:58:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 14:58:45] Further information can be found at the LHC@home message board.
[2026-03-16 14:58:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 14:58:45] Checking for apptainer binary...
[2026-03-16 14:58:45] which: no apptainer in ((null))
[2026-03-16 14:58:45] apptainer is not installed, using version from CVMFS
[2026-03-16 14:58:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 14:58:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-16 14:58:45] apptainer works
[2026-03-16 14:58:45] Set ATHENA_PROC_NUMBER=4
[2026-03-16 14:58:45] Set ATHENA_CORE_NUMBER=4
[2026-03-16 14:58:45] Starting ATLAS job with PandaID=7056908135
[2026-03-16 14:58:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 18:15:46]  *** The last 200 lines of the pilot log: ***
[2026-03-16 18:15:46] 2026-03-16 17:12:36,764 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 18:15:46] 2026-03-16 17:12:36,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 18:15:46] 2026-03-16 17:12:36,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 18:15:46] 2026-03-16 17:12:36,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 18:15:46] 2026-03-16 17:12:36,767 | INFO     | fitting pss+swap vs Time
[2026-03-16 18:15:46] 2026-03-16 17:12:36,767 | INFO     | sum of square deviations: 2160561440.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,768 | INFO     | sum of deviations: 11331400748.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,768 | INFO     | mean x: 1773675352.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,768 | INFO     | mean y: 2329275.926701571
[2026-03-16 18:15:46] 2026-03-16 17:12:36,768 | INFO     | intersect: -9299987167.50754
[2026-03-16 18:15:46] 2026-03-16 17:12:36,768 | INFO     | chi2: 1.9313059238195693
[2026-03-16 18:15:46] 2026-03-16 17:12:36,768 | INFO     | sum of square deviations: 1995283922.5
[2026-03-16 18:15:46] 2026-03-16 17:12:36,769 | INFO     | sum of deviations: 23134964432.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,769 | INFO     | mean x: 1773675199.5
[2026-03-16 18:15:46] 2026-03-16 17:12:36,769 | INFO     | mean y: 2339928.2688172045
[2026-03-16 18:15:46] 2026-03-16 17:12:36,769 | INFO     | intersect: -20563110527.99476
[2026-03-16 18:15:46] 2026-03-16 17:12:36,769 | INFO     | chi2: 1.1112200046508993
[2026-03-16 18:15:46] 2026-03-16 17:12:36,769 | INFO     | current chi2=1.1112200046508993 (change=42.46276620675275 %)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,769 | INFO     | sum of square deviations: 1838657730.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | sum of deviations: 22524452886.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | mean x: 1773675047.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | mean y: 2339333.7955801105
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | intersect: -21726044029.444805
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | chi2: 1.1115568937081874
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | current chi2=1.1115568937081874 (change=-0.03031704395872198 %)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | right removable region: 180
[2026-03-16 18:15:46] 2026-03-16 17:12:36,770 | INFO     | sum of square deviations: 1995283922.5
[2026-03-16 18:15:46] 2026-03-16 17:12:36,771 | INFO     | sum of deviations: -8536804819.999999
[2026-03-16 18:15:46] 2026-03-16 17:12:36,771 | INFO     | mean x: 1773675504.5
[2026-03-16 18:15:46] 2026-03-16 17:12:36,771 | INFO     | mean y: 2347331.2258064514
[2026-03-16 18:15:46] 2026-03-16 17:12:36,771 | INFO     | intersect: 7591002472.074079
[2026-03-16 18:15:46] 2026-03-16 17:12:36,771 | INFO     | chi2: 0.84017786685404
[2026-03-16 18:15:46] 2026-03-16 17:12:36,771 | INFO     | current chi2=0.84017786685404 (change=56.496904167703846 %)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,771 | INFO     | sum of square deviations: 1838657730.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | sum of deviations: -9621935406.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | mean x: 1773675657.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | mean y: 2348383.1602209946
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | intersect: 9284224136.538536
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | chi2: 0.8386870099144544
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | current chi2=0.8386870099144544 (change=0.17744539560032288 %)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | left removable region: 20
[2026-03-16 18:15:46] 2026-03-16 17:12:36,772 | INFO     | sum of square deviations: 1270051720.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,773 | INFO     | sum of deviations: 944971923.0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,773 | INFO     | mean x: 1773675626.5
[2026-03-16 18:15:46] 2026-03-16 17:12:36,773 | INFO     | mean y: 2361481.7125
[2026-03-16 18:15:46] 2026-03-16 17:12:36,773 | INFO     | intersect: -1317327820.0365143
[2026-03-16 18:15:46] 2026-03-16 17:12:36,773 | INFO     | chi2: 0.00034717276339748144
[2026-03-16 18:15:46] 2026-03-16 17:12:36,773 | INFO     | current memory leak: 0.74 B/s (using 160 data points, chi2=0.00)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | could have reported an average CPU frequency of 3648 MHz (10 samples)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | ..............................
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . Timing measurements:
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . get job = 0 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . initial setup = 4 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . payload setup = 4 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . stage-in = 0 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . payload execution = 11597 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . stage-out = 0 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | . log creation = 0 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,774 | INFO     | ..............................
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | 
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | job summary report
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | --------------------------------------------------
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | PanDA job id: 7056908135
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | task id: 49176867
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | errors: (none)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | pilot state: finished 
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | transexitcode: 0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | exeerrorcode: 0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | exeerrordiag: 
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | exitcode: 0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | exitmsg: OK
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | cpuconsumptiontime: 45230 s
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | nevents: 400
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | neventsw: 0
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | pid: 3128211
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | pgrp: 3128211
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | corecount: 4
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | event service: False
[2026-03-16 18:15:46] 2026-03-16 17:12:36,825 | INFO     | sizes: {0: 2280309, 11: 2280309, 11605: 2309686, 11606: 2318706, 11607: 2318762, 11609: 2318956}
[2026-03-16 18:15:46] 2026-03-16 17:12:36,826 | INFO     | --------------------------------------------------
[2026-03-16 18:15:46] 2026-03-16 17:12:36,826 | INFO     | 
[2026-03-16 18:15:46] 2026-03-16 17:12:36,826 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/1
[2026-03-16 18:15:46] 2026-03-16 17:12:36,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,842 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,845 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,845 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 18:15:46] 2026-03-16 17:12:36,846 | INFO     | job 7056908135 has completed (purged errors)
[2026-03-16 18:15:46] 2026-03-16 17:12:36,846 | INFO     | overall cleanup function is called
[2026-03-16 18:15:46] 2026-03-16 17:12:37,852 | INFO     | --- collectZombieJob: --- 10, [3128211]
[2026-03-16 18:15:46] 2026-03-16 17:12:37,853 | INFO     | zombie collector waiting for pid 3128211
[2026-03-16 18:15:46] 2026-03-16 17:12:37,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 18:15:46] 2026-03-16 17:12:37,853 | INFO     | collected zombie processes
[2026-03-16 18:15:46] 2026-03-16 17:12:37,853 | INFO     | will attempt to kill all subprocesses of pid=3128211
[2026-03-16 18:15:46] 2026-03-16 17:12:38,341 | INFO     | process IDs to be killed: [3128211] (in reverse order)
[2026-03-16 18:15:46] 2026-03-16 17:12:38,575 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 18:15:46] 2026-03-16 17:12:38,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 18:15:46] 2026-03-16 17:12:38,607 | INFO     | did not find any defunct processes belonging to 3128211
[2026-03-16 18:15:46] 2026-03-16 17:12:38,638 | INFO     | did not find any defunct processes belonging to 3128211
[2026-03-16 18:15:46] 2026-03-16 17:12:38,638 | INFO     | ready for new job
[2026-03-16 18:15:46] 2026-03-16 17:12:38,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 18:15:46] 2026-03-16 17:12:38,640 | INFO     | **************************************
[2026-03-16 18:15:46] 2026-03-16 17:12:38,640 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 18:15:46] 2026-03-16 17:12:38,640 | INFO     | **************************************
[2026-03-16 18:15:46] 2026-03-16 17:12:38,640 | INFO     | 
[2026-03-16 18:15:46] 2026-03-16 17:12:38,646 | INFO     | architecture information:
[2026-03-16 18:15:46] 2026-03-16 17:12:38,647 | INFO     | executing command: cat /etc/os-release
[2026-03-16 18:15:46] 2026-03-16 17:12:38,663 | INFO     | cat /etc/os-release:
[2026-03-16 18:15:46] NAME="CentOS Linux"
[2026-03-16 18:15:46] VERSION="7 (Core)"
[2026-03-16 18:15:46] ID="centos"
[2026-03-16 18:15:46] ID_LIKE="rhel fedora"
[2026-03-16 18:15:46] VERSION_ID="7"
[2026-03-16 18:15:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 18:15:46] ANSI_COLOR="0;31"
[2026-03-16 18:15:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 18:15:46] HOME_URL="https://www.centos.org/"
[2026-03-16 18:15:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 18:15:46] 
[2026-03-16 18:15:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 18:15:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 18:15:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 18:15:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 18:15:46] 
[2026-03-16 18:15:46] 2026-03-16 17:12:38,664 | INFO     | **************************************
[2026-03-16 18:15:46] 2026-03-16 17:12:39,167 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/1
[2026-03-16 18:15:46] 2026-03-16 17:12:39,183 | INFO     | sufficient remaining disk space (46421508096 B)
[2026-03-16 18:15:46] 2026-03-16 17:12:39,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 18:15:46] 2026-03-16 17:12:39,183 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 18:15:46] 2026-03-16 17:12:39,184 | INFO     | update_server=False
[2026-03-16 18:15:46] 2026-03-16 17:12:39,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 18:15:46] 2026-03-16 17:12:39,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 18:15:46] 2026-03-16 17:12:40,081 | INFO     | all data control threads have been joined
[2026-03-16 18:15:46] 2026-03-16 17:12:40,143 | INFO     | all payload control threads have been joined
[2026-03-16 18:15:46] 2026-03-16 17:12:40,188 | INFO     | [job] retrieve thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:40,282 | INFO     | all job control threads have been joined
[2026-03-16 18:15:46] 2026-03-16 17:12:40,388 | WARNING  | process 3128211 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 18:15:46] 2026-03-16 17:12:40,552 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:40,741 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 18:15:46] 2026-03-16 17:12:40,788 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:40,919 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:40,921 | INFO     | [job] validate thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:40,922 | INFO     | [data] copytool_in thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:41,001 | INFO     | [payload] validate_post thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:41,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 18:15:46] 2026-03-16 17:12:41,086 | INFO     | [data] control thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:41,145 | INFO     | [payload] control thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:41,184 | INFO     | [payload] failed_post thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:41,234 | INFO     | number of running child processes to parent process 3128211: 1
[2026-03-16 18:15:46] 2026-03-16 17:12:41,234 | INFO     | maximum number of monitored processes: 6
[2026-03-16 18:15:46] 2026-03-16 17:12:41,234 | INFO     | aborting job monitoring since job object (job id=7056908135) has expired
[2026-03-16 18:15:46] 2026-03-16 17:12:41,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 18:15:46] 2026-03-16 17:12:41,234 | INFO     | will abort loop
[2026-03-16 18:15:46] 2026-03-16 17:12:41,287 | INFO     | [job] control thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:41,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 18:15:46] 2026-03-16 17:12:41,920 | INFO     | [data] copytool_out thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:42,239 | INFO     | [job] job monitor thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:42,840 | INFO     | [job] queue monitor thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:45,010 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:12:50,015 | INFO     | job.realtimelogging is not enabled
[2026-03-16 18:15:46] 2026-03-16 17:12:51,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 18:15:46] 2026-03-16 17:13:09,362 | INFO     | PID=3108177 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 18:15:46] 2026-03-16 17:13:09,362 | INFO     | .. there are 43 such processes running
[2026-03-16 18:15:46] 2026-03-16 17:13:09,363 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 18:15:46] 2026-03-16 17:13:09,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 18:15:46] 2026-03-16 17:13:09,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 18:15:46] 2026-03-16 17:13:15,175 | INFO     | [monitor] cgroup control has ended
[2026-03-16 18:15:46] 2026-03-16 17:13:15,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22419545552704)>', '<ExcThread(monitor, started 22419304883968)>']
[2026-03-16 18:15:46] 2026-03-16 17:13:16,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 18:15:46] 2026-03-16 17:13:16,398 | INFO     | [monitor] control thread has ended
[2026-03-16 18:15:46] 2026-03-16 17:13:20,544 | INFO     | all workflow threads have been joined
[2026-03-16 18:15:46] 2026-03-16 17:13:20,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 18:15:46] 2026-03-16 17:13:20,545 | INFO     | traces error code: 0
[2026-03-16 18:15:46] 2026-03-16 17:13:20,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 18:15:46] 2026-03-16 17:13:20,708 [wrapper] ==== pilot stdout END ====
[2026-03-16 18:15:46] 2026-03-16 17:13:20,712 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 18:15:46] 2026-03-16 17:13:20,714 [wrapper] pilotpid: 3108177
[2026-03-16 18:15:46] 2026-03-16 17:13:20,716 [wrapper] Pilot exit status: 0
[2026-03-16 18:15:46] 2026-03-16 17:13:20,724 [wrapper] pandaids: 7056908135
[2026-03-16 18:15:46] 2026-03-16 17:13:20,867 [wrapper] cleanup supervisor_pilot 3974955 3108179
[2026-03-16 18:15:46] 2026-03-16 17:13:20,873 [wrapper] Test setup, not cleaning
[2026-03-16 18:15:46] 2026-03-16 17:13:20,876 [wrapper] apfmon messages muted
[2026-03-16 18:15:46] 2026-03-16 17:13:20,878 [wrapper] ==== wrapper stdout END ====
[2026-03-16 18:15:46] 2026-03-16 17:13:20,880 [wrapper] ==== wrapper stderr END ====
[2026-03-16 18:15:46]  *** Error codes and diagnostics ***
[2026-03-16 18:15:46]     "exeErrorCode": 0,
[2026-03-16 18:15:46]     "exeErrorDiag": "",
[2026-03-16 18:15:46]     "pilotErrorCode": 0,
[2026-03-16 18:15:46]     "pilotErrorDiag": "",
[2026-03-16 18:15:46]  *** Listing of results directory ***
[2026-03-16 18:15:46] total 483780
[2026-03-16 18:15:46] -rwx------. 1 boinc boinc     36322 Mar 16 14:15 runpilot2-wrapper.sh
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc       100 Mar 16 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 18:15:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 14:47 run_atlas
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc       105 Mar 16 14:47 job.xml
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc      6708 Mar 16 14:58 init_data.xml
[2026-03-16 18:15:46] -rw-r--r--. 2 boinc boinc 241412055 Mar 16 14:58 EVNT.49135537._000004.pool.root.1
[2026-03-16 18:15:46] -rw-r--r--. 2 boinc boinc     15845 Mar 16 14:58 start_atlas.sh
[2026-03-16 18:15:46] drwxrwx--x. 2 boinc boinc      4096 Mar 16 14:58 shared
[2026-03-16 18:15:46] -rw-r--r--. 2 boinc boinc    597541 Mar 16 14:58 input.tar.gz
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc         0 Mar 16 14:58 boinc_lockfile
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc      2611 Mar 16 14:58 pandaJob.out
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc   1006429 Mar 16 14:58 agis_schedconf.cvmfs.json
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc       444 Mar 16 14:58 workernode_map.json
[2026-03-16 18:15:46] drwx------. 5 boinc boinc      4096 Mar 16 14:58 pilot3
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc 245995519 Mar 16 18:12 HITS.49176867._000099.pool.root.1
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc       529 Mar 16 18:12 boinc_task_state.xml
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc      1034 Mar 16 18:12 memory_monitor_summary.json
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc   1511579 Mar 16 18:12 agis_ddmendpoints.agis.ALL.json
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc    382532 Mar 16 18:12 log.49176867._000099.job.log.tgz.1
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc      6352 Mar 16 18:12 heartbeat.json
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc        95 Mar 16 18:13 pilot_heartbeat.json
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc      5433 Mar 16 18:13 pilotlog.txt
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc   1639587 Mar 16 18:13 log.49176867._000099.job.log.1
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc       357 Mar 16 18:13 output.list
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc       620 Mar 16 18:13 runtime_log
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc   2037760 Mar 16 18:13 result.tar.gz
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc      9205 Mar 16 18:13 runtime_log.err
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc       662 Mar 16 18:13 7tOODmnxMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIatLDmT74c1m.diag
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc        27 Mar 16 18:15 wrapper_checkpoint.txt
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc      8192 Mar 16 18:15 boinc_mmap_file
[2026-03-16 18:15:46] -rw-r--r--. 1 boinc boinc     20834 Mar 16 18:15 stderr.txt
[2026-03-16 18:15:46] HITS file was successfully produced:
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc 245995519 Mar 16 18:12 shared/HITS.pool.root.1
[2026-03-16 18:15:46]  *** Contents of shared directory: ***
[2026-03-16 18:15:46] total 478588
[2026-03-16 18:15:46] -rw-r--r--. 2 boinc boinc 241412055 Mar 16 14:58 ATLAS.root_0
[2026-03-16 18:15:46] -rw-r--r--. 2 boinc boinc     15845 Mar 16 14:58 start_atlas.sh
[2026-03-16 18:15:46] -rw-r--r--. 2 boinc boinc    597541 Mar 16 14:58 input.tar.gz
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc 245995519 Mar 16 18:12 HITS.pool.root.1
[2026-03-16 18:15:46] -rw-------. 1 boinc boinc   2037760 Mar 16 18:13 result.tar.gz
18:15:48 (3095693): run_atlas exited; CPU time 45790.465195
18:15:48 (3095693): called boinc_finish(0)

</stderr_txt>
]]>

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