Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:39 (7093): wrapper (7.7.26015): starting
12:53:39 (7093): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 12:53:39] Arguments: --nthreads 8
[2026-03-17 12:53:39] Threads: 8
[2026-03-17 12:53:39] Checking for CVMFS
[2026-03-17 12:53:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 12:53:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 12:53:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 12:53:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 12:53:43] 2.11.2.0 1190 131205 133964 157370 0 53 18220624 25165825 4553 130560 163 45783481 99.810 32622670 1090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-17 12:53:43] CVMFS is ok
[2026-03-17 12:53:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 12:53:43] Checking for apptainer binary...
[2026-03-17 12:53:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 12:53:43] Running /usr/bin/apptainer --version
[2026-03-17 12:53:43] apptainer version 1.3.2-1.el7
[2026-03-17 12:53:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 12:53:52] cg-vwn395.simple-grid.lan
[2026-03-17 12:53:52] apptainer works
[2026-03-17 12:53:52] Set ATHENA_PROC_NUMBER=8
[2026-03-17 12:53:52] Set ATHENA_CORE_NUMBER=8
[2026-03-17 12:53:52] Starting ATLAS job with PandaID=7056905827
[2026-03-17 12:53:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 00:37:32]  *** The last 200 lines of the pilot log: ***
[2026-03-18 00:37:32] 2026-03-17 23:36:32,954 | INFO     | job 7056905827 has state=finished
[2026-03-18 00:37:32] 2026-03-17 23:36:32,955 | INFO     | preparing for final server update for job 7056905827 in state='finished'
[2026-03-18 00:37:32] 2026-03-17 23:36:32,955 | INFO     | reading metadata from: /var/lib/boinc/slots/12/PanDA_Pilot-7056905827/jobReport.json
[2026-03-18 00:37:32] 2026-03-17 23:36:32,957 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/12/workernode_map.json
[2026-03-18 00:37:32] 2026-03-17 23:36:32,958 | INFO     | this job has now completed (state=finished)
[2026-03-18 00:37:32] 2026-03-17 23:36:32,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 00:37:32] 2026-03-17 23:36:32,958 | INFO     | log transfer has been attempted: DONE
[2026-03-18 00:37:32] 2026-03-17 23:36:32,958 | INFO     | job 7056905827 has finished - writing final server update
[2026-03-18 00:37:32] 2026-03-17 23:36:32,959 | INFO     | total number of processed events: 400 (read)
[2026-03-18 00:37:32] 2026-03-17 23:36:32,961 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7056905827/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 00:37:32] 2026-03-17 23:36:32,961 | INFO     | extracted standard info from prmon json
[2026-03-18 00:37:32] 2026-03-17 23:36:32,961 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 00:37:32] 2026-03-17 23:36:32,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 00:37:32] 2026-03-17 23:36:32,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 00:37:32] 2026-03-17 23:36:32,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 00:37:32] 2026-03-17 23:36:32,976 | INFO     | fitting pss+swap vs Time
[2026-03-18 00:37:32] 2026-03-17 23:36:32,977 | INFO     | sum of square deviations: 98362739150.5
[2026-03-18 00:37:32] 2026-03-17 23:36:32,991 | INFO     | sum of deviations: 351045091770.0
[2026-03-18 00:37:32] 2026-03-17 23:36:32,991 | INFO     | mean x: 1773769780.5
[2026-03-18 00:37:32] 2026-03-17 23:36:32,991 | INFO     | mean y: 2497600.205278592
[2026-03-18 00:37:32] 2026-03-17 23:36:32,991 | INFO     | intersect: -6327878930.096034
[2026-03-18 00:37:32] 2026-03-17 23:36:32,992 | INFO     | chi2: 5.4488357119109665
[2026-03-18 00:37:32] 2026-03-17 23:36:32,994 | INFO     | sum of square deviations: 96215154698.0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,007 | INFO     | sum of deviations: 393913275236.0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,008 | INFO     | mean x: 1773769628.0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,008 | INFO     | mean y: 2500624.986706056
[2026-03-18 00:37:32] 2026-03-17 23:36:33,008 | INFO     | intersect: -7259467677.95617
[2026-03-18 00:37:32] 2026-03-17 23:36:33,009 | INFO     | chi2: 4.688222537907696
[2026-03-18 00:37:32] 2026-03-17 23:36:33,009 | INFO     | current chi2=4.688222537907696 (change=13.95918714048575 %)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,009 | INFO     | right removable region: 676
[2026-03-18 00:37:32] 2026-03-17 23:36:33,010 | INFO     | sum of square deviations: 96215154698.0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,027 | INFO     | sum of deviations: 113830934412.00002
[2026-03-18 00:37:32] 2026-03-17 23:36:33,028 | INFO     | mean x: 1773769933.0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,028 | INFO     | mean y: 2514439.036927622
[2026-03-18 00:37:32] 2026-03-17 23:36:33,028 | INFO     | intersect: -2096010367.5702555
[2026-03-18 00:37:32] 2026-03-17 23:36:33,029 | INFO     | chi2: 1.1478846869519932
[2026-03-18 00:37:32] 2026-03-17 23:36:33,029 | INFO     | current chi2=1.1478846869519932 (change=78.9333951757298 %)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,030 | INFO     | sum of square deviations: 94099059208.0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,047 | INFO     | sum of deviations: 68336250827.000046
[2026-03-18 00:37:32] 2026-03-17 23:36:33,047 | INFO     | mean x: 1773770085.5
[2026-03-18 00:37:32] 2026-03-17 23:36:33,047 | INFO     | mean y: 2517706.7053571427
[2026-03-18 00:37:32] 2026-03-17 23:36:33,047 | INFO     | intersect: -1285622668.8984427
[2026-03-18 00:37:32] 2026-03-17 23:36:33,048 | INFO     | chi2: 0.8875916876418702
[2026-03-18 00:37:32] 2026-03-17 23:36:33,048 | INFO     | current chi2=0.8875916876418702 (change=22.675883934063574 %)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,049 | INFO     | left removable region: 20
[2026-03-18 00:37:32] 2026-03-17 23:36:33,050 | INFO     | sum of square deviations: 87536450580.0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,070 | INFO     | sum of deviations: 69819577030.00002
[2026-03-18 00:37:32] 2026-03-17 23:36:33,070 | INFO     | mean x: 1773770207.5
[2026-03-18 00:37:32] 2026-03-17 23:36:33,070 | INFO     | mean y: 2524086.2804878047
[2026-03-18 00:37:32] 2026-03-17 23:36:33,070 | INFO     | intersect: -1412245244.8438513
[2026-03-18 00:37:32] 2026-03-17 23:36:33,071 | INFO     | chi2: 0.007253685510423692
[2026-03-18 00:37:32] 2026-03-17 23:36:33,071 | INFO     | current memory leak: 0.80 B/s (using 656 data points, chi2=0.01)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,072 | INFO     | could have reported an average CPU frequency of 1999 MHz (27 samples)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | ..............................
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . Timing measurements:
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . get job = 0 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . initial setup = 104 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . payload setup = 128 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . stage-in = 0 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . payload execution = 41686 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . stage-out = 7 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | . log creation = 1 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,073 | INFO     | ..............................
[2026-03-18 00:37:32] 2026-03-17 23:36:33,205 | INFO     | 
[2026-03-18 00:37:32] 2026-03-17 23:36:33,205 | INFO     | job summary report
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | --------------------------------------------------
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | PanDA job id: 7056905827
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | task id: 49176766
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | errors: (none)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | pilot state: finished 
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | transexitcode: 0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | exeerrorcode: 0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,206 | INFO     | exeerrordiag: 
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | exitcode: 0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | exitmsg: OK
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | cpuconsumptiontime: 165312 s
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | nevents: 400
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | neventsw: 0
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | pid: 15696
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | pgrp: 15696
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | corecount: 8
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | event service: False
[2026-03-18 00:37:32] 2026-03-17 23:36:33,207 | INFO     | sizes: {0: 2279819, 1: 2279903, 2: 2280336, 12: 2280364, 41819: 2323340, 41827: 2332340, 41830: 2332524, 41831: 2332718}
[2026-03-18 00:37:32] 2026-03-17 23:36:33,208 | INFO     | --------------------------------------------------
[2026-03-18 00:37:32] 2026-03-17 23:36:33,208 | INFO     | 
[2026-03-18 00:37:32] 2026-03-17 23:36:33,208 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-18 00:37:32] 2026-03-17 23:36:33,285 | INFO     | time since job start (41844s) is within the limit (345600.0s)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,677 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,677 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,677 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,679 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,679 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 00:37:32] 2026-03-17 23:36:33,679 | INFO     | job 7056905827 has completed (purged errors)
[2026-03-18 00:37:32] 2026-03-17 23:36:33,680 | INFO     | overall cleanup function is called
[2026-03-18 00:37:32] 2026-03-17 23:36:34,689 | INFO     | --- collectZombieJob: --- 10, [15696]
[2026-03-18 00:37:32] 2026-03-17 23:36:34,689 | INFO     | zombie collector waiting for pid 15696
[2026-03-18 00:37:32] 2026-03-17 23:36:34,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 00:37:32] 2026-03-17 23:36:34,690 | INFO     | collected zombie processes
[2026-03-18 00:37:32] 2026-03-17 23:36:34,690 | INFO     | will attempt to kill all subprocesses of pid=15696
[2026-03-18 00:37:32] 2026-03-17 23:36:34,809 | INFO     | process IDs to be killed: [15696] (in reverse order)
[2026-03-18 00:37:32] 2026-03-17 23:36:35,625 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 00:37:32] 2026-03-17 23:36:35,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 00:37:32] 2026-03-17 23:36:35,629 | INFO     | did not find any defunct processes belonging to 15696
[2026-03-18 00:37:32] 2026-03-17 23:36:35,632 | INFO     | did not find any defunct processes belonging to 15696
[2026-03-18 00:37:32] 2026-03-17 23:36:35,632 | INFO     | ready for new job
[2026-03-18 00:37:32] 2026-03-17 23:36:35,632 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 00:37:32] 2026-03-17 23:36:35,636 | INFO     | **************************************
[2026-03-18 00:37:32] 2026-03-17 23:36:35,636 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 00:37:32] 2026-03-17 23:36:35,642 | INFO     | **************************************
[2026-03-18 00:37:32] 2026-03-17 23:36:35,642 | INFO     | 
[2026-03-18 00:37:32] 2026-03-17 23:36:35,649 | INFO     | pilot is running in a VM
[2026-03-18 00:37:32] 2026-03-17 23:36:35,650 | INFO     | architecture information:
[2026-03-18 00:37:32] 2026-03-17 23:36:35,658 | INFO     | executing command: cat /etc/os-release
[2026-03-18 00:37:32] 2026-03-17 23:36:35,946 | INFO     | cat /etc/os-release:
[2026-03-18 00:37:32] NAME="CentOS Linux"
[2026-03-18 00:37:32] VERSION="7 (Core)"
[2026-03-18 00:37:32] ID="centos"
[2026-03-18 00:37:32] ID_LIKE="rhel fedora"
[2026-03-18 00:37:32] VERSION_ID="7"
[2026-03-18 00:37:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 00:37:32] ANSI_COLOR="0;31"
[2026-03-18 00:37:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 00:37:32] HOME_URL="https://www.centos.org/"
[2026-03-18 00:37:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 00:37:32] 
[2026-03-18 00:37:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 00:37:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 00:37:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 00:37:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 00:37:32] 
[2026-03-18 00:37:32] 2026-03-17 23:36:35,946 | INFO     | **************************************
[2026-03-18 00:37:32] 2026-03-17 23:36:36,449 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-18 00:37:32] 2026-03-17 23:36:36,622 | INFO     | sufficient remaining disk space (495316893696 B)
[2026-03-18 00:37:32] 2026-03-17 23:36:36,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 00:37:32] 2026-03-17 23:36:36,622 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 00:37:32] 2026-03-17 23:36:36,623 | INFO     | update_server=False
[2026-03-18 00:37:32] 2026-03-17 23:36:36,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 00:37:32] 2026-03-17 23:36:36,830 | INFO     | all job control threads have been joined
[2026-03-18 00:37:32] 2026-03-17 23:36:37,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 00:37:32] 2026-03-17 23:36:37,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 00:37:32] 2026-03-17 23:36:37,057 | INFO     | aborting loop
[2026-03-18 00:37:32] 2026-03-17 23:36:37,362 | INFO     | all data control threads have been joined
[2026-03-18 00:37:32] 2026-03-17 23:36:37,413 | INFO     | all payload control threads have been joined
[2026-03-18 00:37:32] 2026-03-17 23:36:37,628 | INFO     | [job] retrieve thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:37,836 | INFO     | [job] control thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:37,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 00:37:32] 2026-03-17 23:36:37,981 | INFO     | [payload] validate_post thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,063 | INFO     | [job] job monitor thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 00:37:32] 2026-03-17 23:36:38,368 | INFO     | [data] control thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,385 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,409 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,419 | INFO     | [payload] control thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,431 | INFO     | [job] validate thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,771 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:38,932 | INFO     | [payload] failed_post thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:39,058 | INFO     | [data] copytool_out thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:39,121 | INFO     | [data] copytool_in thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:39,227 | INFO     | [job] queue monitor thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:36:41,970 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 00:37:32] 2026-03-17 23:37:06,480 | INFO     | PID=11199 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 00:37:32] 2026-03-17 23:37:06,480 | INFO     | .. there are 9 such processes running
[2026-03-18 00:37:32] 2026-03-17 23:37:06,480 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 00:37:32] 2026-03-17 23:37:06,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 00:37:32] 2026-03-17 23:37:06,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 00:37:32] 2026-03-17 23:37:22,139 | INFO     | [monitor] cgroup control has ended
[2026-03-18 00:37:32] 2026-03-17 23:37:23,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080307177280)>', '<ExcThread(monitor, started 140079855023872)>']
[2026-03-18 00:37:32] 2026-03-17 23:37:23,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 00:37:32] 2026-03-17 23:37:23,583 | INFO     | [monitor] control thread has ended
[2026-03-18 00:37:32] 2026-03-17 23:37:28,121 | INFO     | all workflow threads have been joined
[2026-03-18 00:37:32] 2026-03-17 23:37:28,121 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 00:37:32] 2026-03-17 23:37:28,122 | INFO     | traces error code: 0
[2026-03-18 00:37:32] 2026-03-17 23:37:28,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 00:37:32] 2026-03-17 23:37:28,617 [wrapper] ==== pilot stdout END ====
[2026-03-18 00:37:32] 2026-03-17 23:37:28,715 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 00:37:32] 2026-03-17 23:37:28,767 [wrapper] pilotpid: 11199
[2026-03-18 00:37:32] 2026-03-17 23:37:28,882 [wrapper] Pilot exit status: 0
[2026-03-18 00:37:32] 2026-03-17 23:37:29,421 [wrapper] pandaids: 7056905827
[2026-03-18 00:37:32] 2026-03-17 23:37:30,151 [wrapper] cleanup supervisor_pilot 28233 11200
[2026-03-18 00:37:32] 2026-03-17 23:37:30,181 [wrapper] Test setup, not cleaning
[2026-03-18 00:37:32] 2026-03-17 23:37:30,304 [wrapper] apfmon messages muted
[2026-03-18 00:37:32] 2026-03-17 23:37:30,418 [wrapper] ==== wrapper stdout END ====
[2026-03-18 00:37:32] 2026-03-17 23:37:30,520 [wrapper] ==== wrapper stderr END ====
[2026-03-18 00:37:32]  *** Error codes and diagnostics ***
[2026-03-18 00:37:32]     "exeErrorCode": 0,
[2026-03-18 00:37:32]     "exeErrorDiag": "",
[2026-03-18 00:37:32]     "pilotErrorCode": 0,
[2026-03-18 00:37:32]     "pilotErrorDiag": "",
[2026-03-18 00:37:32]  *** Listing of results directory ***
[2026-03-18 00:37:32] total 500200
[2026-03-18 00:37:32] -rwx------. 1 boinc boinc     36322 Mar 16 14:14 runpilot2-wrapper.sh
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc       100 Mar 17 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 00:37:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 12:53 run_atlas
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc       105 Mar 17 12:53 job.xml
[2026-03-18 00:37:32] -rw-r--r--. 2 boinc boinc 244093563 Mar 17 12:53 EVNT.49135151._000007.pool.root.1
[2026-03-18 00:37:32] -rw-r--r--. 2 boinc boinc    597543 Mar 17 12:53 input.tar.gz
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc      6392 Mar 17 12:53 init_data.xml
[2026-03-18 00:37:32] -rw-r--r--. 2 boinc boinc     15845 Mar 17 12:53 start_atlas.sh
[2026-03-18 00:37:32] drwxrwx--x. 2 boinc boinc        68 Mar 17 12:53 shared
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc         0 Mar 17 12:53 boinc_lockfile
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc      2618 Mar 17 12:53 pandaJob.out
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc       415 Mar 17 12:59 workernode_map.json
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc   1006434 Mar 17 12:59 agis_schedconf.cvmfs.json
[2026-03-18 00:37:32] drwx------. 5 boinc boinc      4096 Mar 17 12:59 pilot3
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc 250927210 Mar 18 00:34 HITS.49176766._000171.pool.root.1
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc       532 Mar 18 00:35 boinc_task_state.xml
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc      1017 Mar 18 00:36 memory_monitor_summary.json
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc   1511579 Mar 18 00:36 agis_ddmendpoints.agis.ALL.json
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc    854794 Mar 18 00:36 log.49176766._000171.job.log.tgz.1
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc      6318 Mar 18 00:36 heartbeat.json
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc        95 Mar 18 00:36 pilot_heartbeat.json
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc        29 Mar 18 00:37 wrapper_checkpoint.txt
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc      8192 Mar 18 00:37 boinc_mmap_file
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc      4881 Mar 18 00:37 pilotlog.txt
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc   5771407 Mar 18 00:37 log.49176766._000171.job.log.1
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc       357 Mar 18 00:37 output.list
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc       620 Mar 18 00:37 runtime_log
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc   6645760 Mar 18 00:37 result.tar.gz
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc      8832 Mar 18 00:37 runtime_log.err
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc       658 Mar 18 00:37 e4iLDmJxMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsiwLDmyvAS9m.diag
[2026-03-18 00:37:32] -rw-r--r--. 1 boinc boinc     20934 Mar 18 00:37 stderr.txt
[2026-03-18 00:37:32] HITS file was successfully produced:
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc 250927210 Mar 18 00:34 shared/HITS.pool.root.1
[2026-03-18 00:37:32]  *** Contents of shared directory: ***
[2026-03-18 00:37:32] total 490516
[2026-03-18 00:37:32] -rw-r--r--. 2 boinc boinc 244093563 Mar 17 12:53 ATLAS.root_0
[2026-03-18 00:37:32] -rw-r--r--. 2 boinc boinc    597543 Mar 17 12:53 input.tar.gz
[2026-03-18 00:37:32] -rw-r--r--. 2 boinc boinc     15845 Mar 17 12:53 start_atlas.sh
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc 250927210 Mar 18 00:34 HITS.pool.root.1
[2026-03-18 00:37:32] -rw-------. 1 boinc boinc   6645760 Mar 18 00:37 result.tar.gz
00:37:33 (7093): run_atlas exited; CPU time 165991.985453
00:37:33 (7093): called boinc_finish(0)

</stderr_txt>
]]>

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