Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:39:34 (3721875): wrapper (7.7.26015): starting
12:39:34 (3721875): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 12:39:34] Arguments: --nthreads 4
[2026-03-18 12:39:34] Threads: 4
[2026-03-18 12:39:34] Checking for CVMFS
[2026-03-18 12:39:34] No cvmfs_config command found, will try listing directly
[2026-03-18 12:39:34] CVMFS is ok
[2026-03-18 12:39:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 12:39:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 12:39:34] Further information can be found at the LHC@home message board.
[2026-03-18 12:39:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 12:39:34] Checking for apptainer binary...
[2026-03-18 12:39:34] which: no apptainer in ((null))
[2026-03-18 12:39:34] apptainer is not installed, using version from CVMFS
[2026-03-18 12:39:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 12:39:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot160/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-18 12:39:35] apptainer works
[2026-03-18 12:39:35] Set ATHENA_PROC_NUMBER=4
[2026-03-18 12:39:35] Set ATHENA_CORE_NUMBER=4
[2026-03-18 12:39:35] Starting ATLAS job with PandaID=7056907997
[2026-03-18 12:39:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot160/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 15:59:06]  *** The last 200 lines of the pilot log: ***
[2026-03-18 15:59:06] 2026-03-18 14:57:27,370 | INFO     | job 7056907997 has state=finished
[2026-03-18 15:59:06] 2026-03-18 14:57:27,370 | INFO     | preparing for final server update for job 7056907997 in state='finished'
[2026-03-18 15:59:06] 2026-03-18 14:57:27,371 | INFO     | reading metadata from: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7056907997/jobReport.json
[2026-03-18 15:59:06] 2026-03-18 14:57:27,372 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot160/slots/0/workernode_map.json
[2026-03-18 15:59:06] 2026-03-18 14:57:27,372 | INFO     | this job has now completed (state=finished)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,372 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,373 | INFO     | log transfer has been attempted: DONE
[2026-03-18 15:59:06] 2026-03-18 14:57:27,373 | INFO     | job 7056907997 has finished - writing final server update
[2026-03-18 15:59:06] 2026-03-18 14:57:27,373 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_915742/.job.ad'
[2026-03-18 15:59:06] 2026-03-18 14:57:27,373 | INFO     | total number of processed events: 400 (read)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,395 | INFO     | using path: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7056907997/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,395 | INFO     | extracted standard info from prmon json
[2026-03-18 15:59:06] 2026-03-18 14:57:27,395 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 15:59:06] 2026-03-18 14:57:27,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 15:59:06] 2026-03-18 14:57:27,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 15:59:06] 2026-03-18 14:57:27,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 15:59:06] 2026-03-18 14:57:27,398 | INFO     | fitting pss+swap vs Time
[2026-03-18 15:59:06] 2026-03-18 14:57:27,398 | INFO     | sum of square deviations: 2263977332.5
[2026-03-18 15:59:06] 2026-03-18 14:57:27,399 | INFO     | sum of deviations: 481155494.9999985
[2026-03-18 15:59:06] 2026-03-18 14:57:27,399 | INFO     | mean x: 1773839922.5
[2026-03-18 15:59:06] 2026-03-18 14:57:27,399 | INFO     | mean y: 2350745.8865979384
[2026-03-18 15:59:06] 2026-03-18 14:57:27,399 | INFO     | intersect: -374637492.3387274
[2026-03-18 15:59:06] 2026-03-18 14:57:27,399 | INFO     | chi2: 1.0526861766912123
[2026-03-18 15:59:06] 2026-03-18 14:57:27,399 | INFO     | sum of square deviations: 2093397390.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | sum of deviations: 527048662.00000095
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | mean x: 1773839770.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | mean y: 2350786.925925926
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | intersect: -444243768.81720966
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | chi2: 1.052812158850573
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | current chi2=1.052812158850573 (change=-0.011967684401123753 %)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | right removable region: 188
[2026-03-18 15:59:06] 2026-03-18 14:57:27,400 | INFO     | sum of square deviations: 2093397390.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,401 | INFO     | sum of deviations: -13103708412.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,401 | INFO     | mean x: 1773840075.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,401 | INFO     | mean y: 2362613.9365079366
[2026-03-18 15:59:06] 2026-03-18 14:57:27,401 | INFO     | intersect: 11105788663.550629
[2026-03-18 15:59:06] 2026-03-18 14:57:27,401 | INFO     | chi2: 0.012598037864276086
[2026-03-18 15:59:06] 2026-03-18 14:57:27,401 | INFO     | current chi2=0.012598037864276086 (change=98.80324847583027 %)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,401 | INFO     | sum of square deviations: 1931608310.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | sum of deviations: -11198897341.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | mean x: 1773840227.5
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | mean y: 2360820.7065217393
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | intersect: 10286565182.56733
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | chi2: 0.011175723309609939
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | current chi2=0.011175723309609939 (change=11.289968882371484 %)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | left removable region: 20
[2026-03-18 15:59:06] 2026-03-18 14:57:27,402 | INFO     | sum of square deviations: 1470248962.0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,403 | INFO     | sum of deviations: -8256200946.499999
[2026-03-18 15:59:06] 2026-03-18 14:57:27,403 | INFO     | mean x: 1773840349.5
[2026-03-18 15:59:06] 2026-03-18 14:57:27,403 | INFO     | mean y: 2358450.9226190476
[2026-03-18 15:59:06] 2026-03-18 14:57:27,403 | INFO     | intersect: 9963380530.176289
[2026-03-18 15:59:06] 2026-03-18 14:57:27,403 | INFO     | chi2: 0.009075711041732387
[2026-03-18 15:59:06] 2026-03-18 14:57:27,403 | INFO     | current memory leak: -5.62 B/s (using 168 data points, chi2=0.01)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | could have reported an average CPU frequency of 3565 MHz (10 samples)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | ..............................
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . Timing measurements:
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . get job = 0 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . initial setup = 11 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . payload setup = 14 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . stage-in = 0 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . payload execution = 11812 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . stage-out = 0 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | . log creation = 0 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,404 | INFO     | ..............................
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | 
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | job summary report
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | --------------------------------------------------
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | PanDA job id: 7056907997
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | task id: 49176840
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | errors: (none)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | pilot state: finished 
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | transexitcode: 0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,465 | INFO     | exeerrorcode: 0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | exeerrordiag: 
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | exitcode: 0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | exitmsg: OK
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | cpuconsumptiontime: 45103 s
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | nevents: 400
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | neventsw: 0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | pid: 3735470
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | pgrp: 3735470
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | corecount: 4
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | event service: False
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | sizes: {0: 2280351, 11: 2280351, 11831: 2310190, 11832: 2319212, 11833: 2319268, 11835: 2319462}
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | --------------------------------------------------
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | 
[2026-03-18 15:59:06] 2026-03-18 14:57:27,466 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot160/slots/0
[2026-03-18 15:59:06] 2026-03-18 14:57:27,486 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,486 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,486 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,486 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | job 7056907997 has completed (purged errors)
[2026-03-18 15:59:06] 2026-03-18 14:57:27,487 | INFO     | overall cleanup function is called
[2026-03-18 15:59:06] 2026-03-18 14:57:28,494 | INFO     | --- collectZombieJob: --- 10, [3735470]
[2026-03-18 15:59:06] 2026-03-18 14:57:28,494 | INFO     | zombie collector waiting for pid 3735470
[2026-03-18 15:59:06] 2026-03-18 14:57:28,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 15:59:06] 2026-03-18 14:57:28,494 | INFO     | collected zombie processes
[2026-03-18 15:59:06] 2026-03-18 14:57:28,494 | INFO     | will attempt to kill all subprocesses of pid=3735470
[2026-03-18 15:59:06] 2026-03-18 14:57:29,025 | INFO     | process IDs to be killed: [3735470] (in reverse order)
[2026-03-18 15:59:06] 2026-03-18 14:57:29,308 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 15:59:06] 2026-03-18 14:57:29,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 15:59:06] 2026-03-18 14:57:29,344 | INFO     | did not find any defunct processes belonging to 3735470
[2026-03-18 15:59:06] 2026-03-18 14:57:29,379 | INFO     | did not find any defunct processes belonging to 3735470
[2026-03-18 15:59:06] 2026-03-18 14:57:29,380 | INFO     | ready for new job
[2026-03-18 15:59:06] 2026-03-18 14:57:29,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 15:59:06] 2026-03-18 14:57:29,381 | INFO     | **************************************
[2026-03-18 15:59:06] 2026-03-18 14:57:29,381 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 15:59:06] 2026-03-18 14:57:29,381 | INFO     | **************************************
[2026-03-18 15:59:06] 2026-03-18 14:57:29,381 | INFO     | 
[2026-03-18 15:59:06] 2026-03-18 14:57:29,388 | INFO     | architecture information:
[2026-03-18 15:59:06] 2026-03-18 14:57:29,388 | INFO     | executing command: cat /etc/os-release
[2026-03-18 15:59:06] 2026-03-18 14:57:29,405 | INFO     | cat /etc/os-release:
[2026-03-18 15:59:06] NAME="CentOS Linux"
[2026-03-18 15:59:06] VERSION="7 (Core)"
[2026-03-18 15:59:06] ID="centos"
[2026-03-18 15:59:06] ID_LIKE="rhel fedora"
[2026-03-18 15:59:06] VERSION_ID="7"
[2026-03-18 15:59:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 15:59:06] ANSI_COLOR="0;31"
[2026-03-18 15:59:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 15:59:06] HOME_URL="https://www.centos.org/"
[2026-03-18 15:59:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 15:59:06] 
[2026-03-18 15:59:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 15:59:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 15:59:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 15:59:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 15:59:06] 
[2026-03-18 15:59:06] 2026-03-18 14:57:29,405 | INFO     | **************************************
[2026-03-18 15:59:06] 2026-03-18 14:57:29,908 | INFO     | executing command: df -mP /var/lib/boinc/var/slot160/slots/0
[2026-03-18 15:59:06] 2026-03-18 14:57:29,927 | INFO     | sufficient remaining disk space (21421359104 B)
[2026-03-18 15:59:06] 2026-03-18 14:57:29,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 15:59:06] 2026-03-18 14:57:29,927 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 15:59:06] 2026-03-18 14:57:29,927 | INFO     | update_server=False
[2026-03-18 15:59:06] 2026-03-18 14:57:29,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 15:59:06] 2026-03-18 14:57:29,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 15:59:06] 2026-03-18 14:57:29,933 | INFO     | all payload control threads have been joined
[2026-03-18 15:59:06] 2026-03-18 14:57:30,277 | INFO     | all job control threads have been joined
[2026-03-18 15:59:06] 2026-03-18 14:57:30,334 | INFO     | all data control threads have been joined
[2026-03-18 15:59:06] 2026-03-18 14:57:30,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 15:59:06] 2026-03-18 14:57:30,771 | INFO     | aborting loop
[2026-03-18 15:59:06] 2026-03-18 14:57:30,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 15:59:06] 2026-03-18 14:57:30,932 | INFO     | [job] retrieve thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:30,938 | INFO     | [payload] control thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,008 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,145 | INFO     | [payload] failed_post thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,282 | INFO     | [job] control thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,339 | INFO     | [data] control thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,437 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,454 | INFO     | [job] validate thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,480 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,659 | INFO     | [data] copytool_in thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,776 | INFO     | [job] job monitor thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:31,933 | INFO     | [data] copytool_out thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:32,192 | INFO     | [payload] validate_post thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:32,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 15:59:06] 2026-03-18 14:57:33,478 | INFO     | [job] queue monitor thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:34,935 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:57:40,951 | INFO     | job.realtimelogging is not enabled
[2026-03-18 15:59:06] 2026-03-18 14:57:41,956 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 15:59:06] 2026-03-18 14:58:00,986 | INFO     | PID=3727058 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 15:59:06] 2026-03-18 14:58:00,987 | INFO     | .. there are 46 such processes running
[2026-03-18 15:59:06] 2026-03-18 14:58:00,987 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 15:59:06] 2026-03-18 14:58:00,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 15:59:06] 2026-03-18 14:58:00,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 15:59:06] 2026-03-18 14:58:20,508 | INFO     | [monitor] cgroup control has ended
[2026-03-18 15:59:06] 2026-03-18 14:58:22,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22456233305920)>', '<ExcThread(monitor, started 22455988258560)>']
[2026-03-18 15:59:06] 2026-03-18 14:58:23,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 15:59:06] 2026-03-18 14:58:23,100 | INFO     | [monitor] control thread has ended
[2026-03-18 15:59:06] 2026-03-18 14:58:27,515 | INFO     | all workflow threads have been joined
[2026-03-18 15:59:06] 2026-03-18 14:58:27,515 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 15:59:06] 2026-03-18 14:58:27,515 | INFO     | traces error code: 0
[2026-03-18 15:59:06] 2026-03-18 14:58:27,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 15:59:06] 2026-03-18 14:58:27,701 [wrapper] ==== pilot stdout END ====
[2026-03-18 15:59:06] 2026-03-18 14:58:27,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 15:59:06] 2026-03-18 14:58:27,727 [wrapper] pilotpid: 3727058
[2026-03-18 15:59:06] 2026-03-18 14:58:27,730 [wrapper] Pilot exit status: 0
[2026-03-18 15:59:06] 2026-03-18 14:58:27,742 [wrapper] pandaids: 7056907997
[2026-03-18 15:59:06] 2026-03-18 14:58:27,891 [wrapper] cleanup supervisor_pilot  429056 3727059
[2026-03-18 15:59:06] 2026-03-18 14:58:27,893 [wrapper] Test setup, not cleaning
[2026-03-18 15:59:06] 2026-03-18 14:58:27,896 [wrapper] apfmon messages muted
[2026-03-18 15:59:06] 2026-03-18 14:58:27,899 [wrapper] ==== wrapper stdout END ====
[2026-03-18 15:59:06] 2026-03-18 14:58:27,901 [wrapper] ==== wrapper stderr END ====
[2026-03-18 15:59:06]  *** Error codes and diagnostics ***
[2026-03-18 15:59:06]     "exeErrorCode": 0,
[2026-03-18 15:59:06]     "exeErrorDiag": "",
[2026-03-18 15:59:06]     "pilotErrorCode": 0,
[2026-03-18 15:59:06]     "pilotErrorDiag": "",
[2026-03-18 15:59:06]  *** Listing of results directory ***
[2026-03-18 15:59:06] total 472080
[2026-03-18 15:59:06] -rwx------. 1 boinc boinc     36322 Mar 16 14:14 runpilot2-wrapper.sh
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc       100 Mar 18 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 15:59:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 12:39 run_atlas
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc       105 Mar 18 12:39 job.xml
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc      6708 Mar 18 12:39 init_data.xml
[2026-03-18 15:59:06] -rw-r--r--. 2 boinc boinc 240675709 Mar 18 12:39 EVNT.49135435._000005.pool.root.1
[2026-03-18 15:59:06] -rw-r--r--. 2 boinc boinc     15845 Mar 18 12:39 start_atlas.sh
[2026-03-18 15:59:06] drwxrwx--x. 2 boinc boinc      4096 Mar 18 12:39 shared
[2026-03-18 15:59:06] -rw-r--r--. 2 boinc boinc    597553 Mar 18 12:39 input.tar.gz
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc         0 Mar 18 12:39 boinc_lockfile
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc      2644 Mar 18 12:39 pandaJob.out
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc   1010909 Mar 18 12:39 agis_schedconf.cvmfs.json
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc       445 Mar 18 12:40 workernode_map.json
[2026-03-18 15:59:06] drwx------. 5 boinc boinc      4096 Mar 18 12:40 pilot3
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc 234732429 Mar 18 15:56 HITS.49176840._000125.pool.root.1
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc       530 Mar 18 15:56 boinc_task_state.xml
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc      1032 Mar 18 15:57 memory_monitor_summary.json
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc   1511579 Mar 18 15:57 agis_ddmendpoints.agis.ALL.json
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc    380561 Mar 18 15:57 log.49176840._000125.job.log.tgz.1
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc      6356 Mar 18 15:57 heartbeat.json
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc        95 Mar 18 15:58 pilot_heartbeat.json
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc      4902 Mar 18 15:58 pilotlog.txt
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc   1654391 Mar 18 15:58 log.49176840._000125.job.log.1
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc       357 Mar 18 15:58 output.list
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc       620 Mar 18 15:58 runtime_log
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc   2048000 Mar 18 15:58 result.tar.gz
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc      9222 Mar 18 15:58 runtime_log.err
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc       665 Mar 18 15:58 UyGODmcxMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPYtLDmH8ifln.diag
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc        27 Mar 18 15:59 wrapper_checkpoint.txt
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc      8192 Mar 18 15:59 boinc_mmap_file
[2026-03-18 15:59:06] -rw-r--r--. 1 boinc boinc     21113 Mar 18 15:59 stderr.txt
[2026-03-18 15:59:06] HITS file was successfully produced:
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc 234732429 Mar 18 15:56 shared/HITS.pool.root.1
[2026-03-18 15:59:06]  *** Contents of shared directory: ***
[2026-03-18 15:59:06] total 466876
[2026-03-18 15:59:06] -rw-r--r--. 2 boinc boinc 240675709 Mar 18 12:39 ATLAS.root_0
[2026-03-18 15:59:06] -rw-r--r--. 2 boinc boinc     15845 Mar 18 12:39 start_atlas.sh
[2026-03-18 15:59:06] -rw-r--r--. 2 boinc boinc    597553 Mar 18 12:39 input.tar.gz
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc 234732429 Mar 18 15:56 HITS.pool.root.1
[2026-03-18 15:59:06] -rw-------. 1 boinc boinc   2048000 Mar 18 15:58 result.tar.gz
15:59:08 (3721875): run_atlas exited; CPU time 45679.088493
15:59:08 (3721875): called boinc_finish(0)

</stderr_txt>
]]>

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