Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:51:31 (1747364): wrapper (7.7.26015): starting
08:51:31 (1747364): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 08:51:31] Arguments: --nthreads 4
[2026-03-17 08:51:31] Threads: 4
[2026-03-17 08:51:31] Checking for CVMFS
[2026-03-17 08:51:31] No cvmfs_config command found, will try listing directly
[2026-03-17 08:51:31] CVMFS is ok
[2026-03-17 08:51:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 08:51:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 08:51:31] Further information can be found at the LHC@home message board.
[2026-03-17 08:51:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 08:51:31] Checking for apptainer binary...
[2026-03-17 08:51:31] which: no apptainer in ((null))
[2026-03-17 08:51:31] apptainer is not installed, using version from CVMFS
[2026-03-17 08:51:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 08:51:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-17 08:51:31] apptainer works
[2026-03-17 08:51:31] Set ATHENA_PROC_NUMBER=4
[2026-03-17 08:51:31] Set ATHENA_CORE_NUMBER=4
[2026-03-17 08:51:31] Starting ATLAS job with PandaID=7056905717
[2026-03-17 08:51:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 12:53:40]  *** The last 200 lines of the pilot log: ***
[2026-03-17 12:53:40] 2026-03-17 11:50:15,702 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/PanDA_Pilot-7056905717/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 12:53:40] 2026-03-17 11:50:15,702 | INFO     | extracted standard info from prmon json
[2026-03-17 12:53:40] 2026-03-17 11:50:15,702 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 12:53:40] 2026-03-17 11:50:15,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 12:53:40] 2026-03-17 11:50:15,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 12:53:40] 2026-03-17 11:50:15,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 12:53:40] 2026-03-17 11:50:15,705 | INFO     | fitting pss+swap vs Time
[2026-03-17 12:53:40] 2026-03-17 11:50:15,705 | INFO     | sum of square deviations: 4024149870.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,706 | INFO     | sum of deviations: 8009686800.999994
[2026-03-17 12:53:40] 2026-03-17 11:50:15,706 | INFO     | mean x: 1773741067.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,706 | INFO     | mean y: 2328088.485106383
[2026-03-17 12:53:40] 2026-03-17 11:50:15,706 | INFO     | intersect: -3528134461.793009
[2026-03-17 12:53:40] 2026-03-17 11:50:15,707 | INFO     | chi2: 1.9020832359457245
[2026-03-17 12:53:40] 2026-03-17 11:50:15,707 | INFO     | sum of square deviations: 3772712597.5
[2026-03-17 12:53:40] 2026-03-17 11:50:15,708 | INFO     | sum of deviations: 22613531674.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,708 | INFO     | mean x: 1773740914.5
[2026-03-17 12:53:40] 2026-03-17 11:50:15,708 | INFO     | mean y: 2336789.547826087
[2026-03-17 12:53:40] 2026-03-17 11:50:15,708 | INFO     | intersect: -10629415647.172335
[2026-03-17 12:53:40] 2026-03-17 11:50:15,708 | INFO     | chi2: 1.0862705908224568
[2026-03-17 12:53:40] 2026-03-17 11:50:15,708 | INFO     | current chi2=1.0862705908224568 (change=42.89048080052301 %)
[2026-03-17 12:53:40] 2026-03-17 11:50:15,708 | INFO     | sum of square deviations: 3531973200.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | sum of deviations: 22002174668.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | mean x: 1773740762.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | mean y: 2336402.2
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | intersect: -11047054929.896011
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | chi2: 1.086691969876812
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | current chi2=1.086691969876812 (change=-0.038791352533644484 %)
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | right removable region: 224
[2026-03-17 12:53:40] 2026-03-17 11:50:15,709 | INFO     | sum of square deviations: 3772712597.5
[2026-03-17 12:53:40] 2026-03-17 11:50:15,710 | INFO     | sum of deviations: -14492936137.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,710 | INFO     | mean x: 1773741219.5
[2026-03-17 12:53:40] 2026-03-17 11:50:15,710 | INFO     | mean y: 2341549.3913043477
[2026-03-17 12:53:40] 2026-03-17 11:50:15,710 | INFO     | intersect: 6816196979.251675
[2026-03-17 12:53:40] 2026-03-17 11:50:15,711 | INFO     | chi2: 0.8335758208361206
[2026-03-17 12:53:40] 2026-03-17 11:50:15,711 | INFO     | current chi2=0.8335758208361206 (change=56.175639157996 %)
[2026-03-17 12:53:40] 2026-03-17 11:50:15,711 | INFO     | sum of square deviations: 3531973200.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | sum of deviations: -14021068258.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | mean x: 1773741372.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | mean y: 2341248.9066666667
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | intersect: 7043659922.799937
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | chi2: 0.8337883004240009
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | current chi2=0.8337883004240009 (change=-0.02549013329911122 %)
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | left removable region: 20
[2026-03-17 12:53:40] 2026-03-17 11:50:15,712 | INFO     | sum of square deviations: 2632440055.0
[2026-03-17 12:53:40] 2026-03-17 11:50:15,713 | INFO     | sum of deviations: 2167437695.5
[2026-03-17 12:53:40] 2026-03-17 11:50:15,713 | INFO     | mean x: 1773741341.5
[2026-03-17 12:53:40] 2026-03-17 11:50:15,713 | INFO     | mean y: 2349118.7598039214
[2026-03-17 12:53:40] 2026-03-17 11:50:15,713 | INFO     | intersect: -1458073061.9207125
[2026-03-17 12:53:40] 2026-03-17 11:50:15,713 | INFO     | chi2: 0.0009732928637445244
[2026-03-17 12:53:40] 2026-03-17 11:50:15,713 | INFO     | current memory leak: 0.82 B/s (using 204 data points, chi2=0.00)
[2026-03-17 12:53:40] 2026-03-17 11:50:15,713 | INFO     | could have reported an average CPU frequency of 3557 MHz (11 samples)
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | ..............................
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . Timing measurements:
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . get job = 0 s
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . initial setup = 5 s
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . payload setup = 6 s
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . stage-in = 0 s
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . payload execution = 14285 s
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . stage-out = 0 s
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | . log creation = 0 s
[2026-03-17 12:53:40] 2026-03-17 11:50:15,714 | INFO     | ..............................
[2026-03-17 12:53:40] 2026-03-17 11:50:16,249 | INFO     | 
[2026-03-17 12:53:40] 2026-03-17 11:50:16,249 | INFO     | job summary report
[2026-03-17 12:53:40] 2026-03-17 11:50:16,249 | INFO     | --------------------------------------------------
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | PanDA job id: 7056905717
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | task id: 49176766
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | errors: (none)
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | pilot state: finished 
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | transexitcode: 0
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | exeerrorcode: 0
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | exeerrordiag: 
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | exitcode: 0
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | exitmsg: OK
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | cpuconsumptiontime: 55162 s
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | nevents: 400
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | neventsw: 0
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | pid: 1766001
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | pgrp: 1766001
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | corecount: 4
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | event service: False
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | sizes: {0: 2279882, 1: 2280343, 11: 2280343, 14295: 2311253, 14297: 2320331, 14298: 2320469}
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | --------------------------------------------------
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | 
[2026-03-17 12:53:40] 2026-03-17 11:50:16,250 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/1
[2026-03-17 12:53:40] 2026-03-17 11:50:16,317 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,317 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,317 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,317 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 12:53:40] 2026-03-17 11:50:16,318 | INFO     | job 7056905717 has completed (purged errors)
[2026-03-17 12:53:40] 2026-03-17 11:50:16,319 | INFO     | overall cleanup function is called
[2026-03-17 12:53:40] 2026-03-17 11:50:16,383 | INFO     | number of running child processes to parent process 1766001: 1
[2026-03-17 12:53:40] 2026-03-17 11:50:16,383 | INFO     | maximum number of monitored processes: 6
[2026-03-17 12:53:40] 2026-03-17 11:50:16,383 | INFO     | aborting job monitoring since job object (job id=7056905717) has expired
[2026-03-17 12:53:40] 2026-03-17 11:50:17,325 | INFO     | --- collectZombieJob: --- 10, [1766001]
[2026-03-17 12:53:40] 2026-03-17 11:50:17,325 | INFO     | zombie collector waiting for pid 1766001
[2026-03-17 12:53:40] 2026-03-17 11:50:17,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 12:53:40] 2026-03-17 11:50:17,325 | INFO     | collected zombie processes
[2026-03-17 12:53:40] 2026-03-17 11:50:17,325 | INFO     | will attempt to kill all subprocesses of pid=1766001
[2026-03-17 12:53:40] 2026-03-17 11:50:17,957 | INFO     | process IDs to be killed: [1766001] (in reverse order)
[2026-03-17 12:53:40] 2026-03-17 11:50:18,244 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 12:53:40] 2026-03-17 11:50:18,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 12:53:40] 2026-03-17 11:50:18,372 | INFO     | did not find any defunct processes belonging to 1766001
[2026-03-17 12:53:40] 2026-03-17 11:50:18,449 | INFO     | did not find any defunct processes belonging to 1766001
[2026-03-17 12:53:40] 2026-03-17 11:50:18,449 | INFO     | ready for new job
[2026-03-17 12:53:40] 2026-03-17 11:50:18,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 12:53:40] 2026-03-17 11:50:18,451 | INFO     | **************************************
[2026-03-17 12:53:40] 2026-03-17 11:50:18,451 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 12:53:40] 2026-03-17 11:50:18,451 | INFO     | **************************************
[2026-03-17 12:53:40] 2026-03-17 11:50:18,451 | INFO     | 
[2026-03-17 12:53:40] 2026-03-17 11:50:18,457 | INFO     | architecture information:
[2026-03-17 12:53:40] 2026-03-17 11:50:18,458 | INFO     | executing command: cat /etc/os-release
[2026-03-17 12:53:40] 2026-03-17 11:50:18,472 | INFO     | cat /etc/os-release:
[2026-03-17 12:53:40] NAME="CentOS Linux"
[2026-03-17 12:53:40] VERSION="7 (Core)"
[2026-03-17 12:53:40] ID="centos"
[2026-03-17 12:53:40] ID_LIKE="rhel fedora"
[2026-03-17 12:53:40] VERSION_ID="7"
[2026-03-17 12:53:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 12:53:40] ANSI_COLOR="0;31"
[2026-03-17 12:53:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 12:53:40] HOME_URL="https://www.centos.org/"
[2026-03-17 12:53:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 12:53:40] 
[2026-03-17 12:53:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 12:53:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 12:53:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 12:53:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 12:53:40] 
[2026-03-17 12:53:40] 2026-03-17 11:50:18,472 | INFO     | **************************************
[2026-03-17 12:53:40] 2026-03-17 11:50:18,974 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/1
[2026-03-17 12:53:40] 2026-03-17 11:50:18,989 | INFO     | sufficient remaining disk space (22103982080 B)
[2026-03-17 12:53:40] 2026-03-17 11:50:18,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 12:53:40] 2026-03-17 11:50:18,989 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 12:53:40] 2026-03-17 11:50:18,989 | INFO     | update_server=False
[2026-03-17 12:53:40] 2026-03-17 11:50:18,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 12:53:40] 2026-03-17 11:50:18,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 12:53:40] 2026-03-17 11:50:19,468 | INFO     | all job control threads have been joined
[2026-03-17 12:53:40] 2026-03-17 11:50:19,581 | INFO     | all data control threads have been joined
[2026-03-17 12:53:40] 2026-03-17 11:50:19,767 | INFO     | all payload control threads have been joined
[2026-03-17 12:53:40] 2026-03-17 11:50:19,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 12:53:40] 2026-03-17 11:50:19,892 | INFO     | aborting loop
[2026-03-17 12:53:40] 2026-03-17 11:50:19,994 | INFO     | [job] retrieve thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,473 | INFO     | [job] control thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,513 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,586 | INFO     | [data] control thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,613 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,683 | INFO     | [job] validate thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,772 | INFO     | [payload] control thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 12:53:40] 2026-03-17 11:50:20,897 | INFO     | [job] job monitor thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,953 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,968 | INFO     | [payload] validate_post thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:20,995 | INFO     | [data] copytool_out thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:21,229 | INFO     | [data] copytool_in thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:21,399 | INFO     | [payload] failed_post thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:21,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 12:53:40] 2026-03-17 11:50:21,810 | INFO     | [job] queue monitor thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:25,631 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:29,450 | INFO     | job.realtimelogging is not enabled
[2026-03-17 12:53:40] 2026-03-17 11:50:30,455 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 12:53:40] 2026-03-17 11:50:48,585 | INFO     | PID=1754047 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 12:53:40] 2026-03-17 11:50:48,585 | INFO     | .. there are 42 such processes running
[2026-03-17 12:53:40] 2026-03-17 11:50:48,585 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 12:53:40] 2026-03-17 11:50:48,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 12:53:40] 2026-03-17 11:50:48,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 12:53:40] 2026-03-17 11:51:10,851 | INFO     | [monitor] cgroup control has ended
[2026-03-17 12:53:40] 2026-03-17 11:51:11,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22903252367168)>', '<ExcThread(monitor, started 22903010891520)>']
[2026-03-17 12:53:40] 2026-03-17 11:51:11,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 12:53:40] 2026-03-17 11:51:11,706 | INFO     | [monitor] control thread has ended
[2026-03-17 12:53:40] 2026-03-17 11:51:16,611 | INFO     | all workflow threads have been joined
[2026-03-17 12:53:40] 2026-03-17 11:51:16,611 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 12:53:40] 2026-03-17 11:51:16,617 | INFO     | traces error code: 0
[2026-03-17 12:53:40] 2026-03-17 11:51:16,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 12:53:40] 2026-03-17 11:51:16,800 [wrapper] ==== pilot stdout END ====
[2026-03-17 12:53:40] 2026-03-17 11:51:16,806 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 12:53:40] 2026-03-17 11:51:16,820 [wrapper] pilotpid: 1754047
[2026-03-17 12:53:40] 2026-03-17 11:51:16,825 [wrapper] Pilot exit status: 0
[2026-03-17 12:53:40] 2026-03-17 11:51:16,866 [wrapper] pandaids: 7056905717
[2026-03-17 12:53:40] 2026-03-17 11:51:17,032 [wrapper] cleanup supervisor_pilot 2726925 1754048
[2026-03-17 12:53:40] 2026-03-17 11:51:17,034 [wrapper] Test setup, not cleaning
[2026-03-17 12:53:40] 2026-03-17 11:51:17,043 [wrapper] apfmon messages muted
[2026-03-17 12:53:40] 2026-03-17 11:51:17,047 [wrapper] ==== wrapper stdout END ====
[2026-03-17 12:53:40] 2026-03-17 11:51:17,063 [wrapper] ==== wrapper stderr END ====
[2026-03-17 12:53:40]  *** Error codes and diagnostics ***
[2026-03-17 12:53:40]     "exeErrorCode": 0,
[2026-03-17 12:53:40]     "exeErrorDiag": "",
[2026-03-17 12:53:40]     "pilotErrorCode": 0,
[2026-03-17 12:53:40]     "pilotErrorDiag": "",
[2026-03-17 12:53:40]  *** Listing of results directory ***
[2026-03-17 12:53:40] total 489908
[2026-03-17 12:53:40] -rwx------. 1 boinc boinc     36322 Mar 16 14:14 runpilot2-wrapper.sh
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:25 queuedata.json
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc       100 Mar 17 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 12:53:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 08:51 run_atlas
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc       105 Mar 17 08:51 job.xml
[2026-03-17 12:53:40] -rw-r--r--. 2 boinc boinc 244627478 Mar 17 08:51 EVNT.49135151._000003.pool.root.1
[2026-03-17 12:53:40] -rw-r--r--. 2 boinc boinc     15845 Mar 17 08:51 start_atlas.sh
[2026-03-17 12:53:40] drwxrwx--x. 2 boinc boinc      4096 Mar 17 08:51 shared
[2026-03-17 12:53:40] -rw-r--r--. 2 boinc boinc    597539 Mar 17 08:51 input.tar.gz
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc      6709 Mar 17 08:51 init_data.xml
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc         0 Mar 17 08:51 boinc_lockfile
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc      2616 Mar 17 08:51 pandaJob.out
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc   1005652 Mar 17 08:51 agis_schedconf.cvmfs.json
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc       444 Mar 17 08:51 workernode_map.json
[2026-03-17 12:53:40] drwx------. 5 boinc boinc      4096 Mar 17 08:51 pilot3
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc 248317719 Mar 17 12:49 HITS.49176766._000061.pool.root.1
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc      1032 Mar 17 12:50 memory_monitor_summary.json
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc       529 Mar 17 12:50 boinc_task_state.xml
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc   1511579 Mar 17 12:50 agis_ddmendpoints.agis.ALL.json
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc    399664 Mar 17 12:50 log.49176766._000061.job.log.tgz.1
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc      6353 Mar 17 12:50 heartbeat.json
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc        95 Mar 17 12:50 pilot_heartbeat.json
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc      4902 Mar 17 12:51 pilotlog.txt
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc   1991438 Mar 17 12:51 log.49176766._000061.job.log.1
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc       357 Mar 17 12:51 output.list
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc       620 Mar 17 12:51 runtime_log
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc   2406400 Mar 17 12:51 result.tar.gz
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc      9222 Mar 17 12:51 runtime_log.err
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc       665 Mar 17 12:51 3ScMDmHxMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmjVtLDm2qPVIm.diag
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc        27 Mar 17 12:53 wrapper_checkpoint.txt
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc      8192 Mar 17 12:53 boinc_mmap_file
[2026-03-17 12:53:40] -rw-r--r--. 1 boinc boinc     20819 Mar 17 12:53 stderr.txt
[2026-03-17 12:53:40] HITS file was successfully produced:
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc 248317719 Mar 17 12:49 shared/HITS.pool.root.1
[2026-03-17 12:53:40]  *** Contents of shared directory: ***
[2026-03-17 12:53:40] total 484356
[2026-03-17 12:53:40] -rw-r--r--. 2 boinc boinc 244627478 Mar 17 08:51 ATLAS.root_0
[2026-03-17 12:53:40] -rw-r--r--. 2 boinc boinc     15845 Mar 17 08:51 start_atlas.sh
[2026-03-17 12:53:40] -rw-r--r--. 2 boinc boinc    597539 Mar 17 08:51 input.tar.gz
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc 248317719 Mar 17 12:49 HITS.pool.root.1
[2026-03-17 12:53:40] -rw-------. 1 boinc boinc   2406400 Mar 17 12:51 result.tar.gz
12:53:41 (1747364): run_atlas exited; CPU time 55923.483122
12:53:41 (1747364): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN