Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:22 (529932): wrapper (7.7.26015): starting
03:32:22 (529932): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 03:32:22] Arguments: --nthreads 4
[2026-03-18 03:32:22] Threads: 4
[2026-03-18 03:32:22] Checking for CVMFS
[2026-03-18 03:32:22] No cvmfs_config command found, will try listing directly
[2026-03-18 03:32:22] CVMFS is ok
[2026-03-18 03:32:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 03:32:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 03:32:22] Further information can be found at the LHC@home message board.
[2026-03-18 03:32:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 03:32:22] Checking for apptainer binary...
[2026-03-18 03:32:22] which: no apptainer in ((null))
[2026-03-18 03:32:22] apptainer is not installed, using version from CVMFS
[2026-03-18 03:32:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 03:32:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-18 03:32:22] apptainer works
[2026-03-18 03:32:22] Set ATHENA_PROC_NUMBER=4
[2026-03-18 03:32:22] Set ATHENA_CORE_NUMBER=4
[2026-03-18 03:32:22] Starting ATLAS job with PandaID=7056899635
[2026-03-18 03:32:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 06:48:01]  *** The last 200 lines of the pilot log: ***
[2026-03-18 06:48:01] 2026-03-18 05:47:04,861 | INFO     | preparing for final server update for job 7056899635 in state='finished'
[2026-03-18 06:48:01] 2026-03-18 05:47:04,861 | INFO     | reading metadata from: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7056899635/jobReport.json
[2026-03-18 06:48:01] 2026-03-18 05:47:04,863 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot116/slots/1/workernode_map.json
[2026-03-18 06:48:01] 2026-03-18 05:47:04,863 | INFO     | this job has now completed (state=finished)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,863 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,863 | INFO     | log transfer has been attempted: DONE
[2026-03-18 06:48:01] 2026-03-18 05:47:04,863 | INFO     | job 7056899635 has finished - writing final server update
[2026-03-18 06:48:01] 2026-03-18 05:47:04,863 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2160634/.job.ad'
[2026-03-18 06:48:01] 2026-03-18 05:47:04,863 | INFO     | total number of processed events: 400 (read)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,881 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7056899635/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,881 | INFO     | extracted standard info from prmon json
[2026-03-18 06:48:01] 2026-03-18 05:47:04,881 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 06:48:01] 2026-03-18 05:47:04,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 06:48:01] 2026-03-18 05:47:04,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 06:48:01] 2026-03-18 05:47:04,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 06:48:01] 2026-03-18 05:47:04,883 | INFO     | fitting pss+swap vs Time
[2026-03-18 06:48:01] 2026-03-18 05:47:04,883 | INFO     | sum of square deviations: 2160561440.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,884 | INFO     | sum of deviations: 11770550179.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,884 | INFO     | mean x: 1773806972.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,884 | INFO     | mean y: 2342806.8638743456
[2026-03-18 06:48:01] 2026-03-18 05:47:04,885 | INFO     | intersect: -9661202781.446749
[2026-03-18 06:48:01] 2026-03-18 05:47:04,885 | INFO     | chi2: 1.0924443897849896
[2026-03-18 06:48:01] 2026-03-18 05:47:04,885 | INFO     | sum of square deviations: 1995283922.5
[2026-03-18 06:48:01] 2026-03-18 05:47:04,885 | INFO     | sum of deviations: 11440120926.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,886 | INFO     | mean x: 1773806819.5
[2026-03-18 06:48:01] 2026-03-18 05:47:04,886 | INFO     | mean y: 2342501.946236559
[2026-03-18 06:48:01] 2026-03-18 05:47:04,886 | INFO     | intersect: -10167921632.201548
[2026-03-18 06:48:01] 2026-03-18 05:47:04,886 | INFO     | chi2: 1.093055090342298
[2026-03-18 06:48:01] 2026-03-18 05:47:04,886 | INFO     | current chi2=1.093055090342298 (change=-0.055902210036391994 %)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,886 | INFO     | right removable region: 185
[2026-03-18 06:48:01] 2026-03-18 05:47:04,886 | INFO     | sum of square deviations: 1995283922.5
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | sum of deviations: -5802832644.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | mean x: 1773807124.5
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | mean y: 2358731.0215053763
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | intersect: 5161076129.651961
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | chi2: 0.013005106953159318
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | current chi2=0.013005106953159318 (change=98.80954059769405 %)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | sum of square deviations: 1838657730.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | sum of deviations: -3998534566.999999
[2026-03-18 06:48:01] 2026-03-18 05:47:04,887 | INFO     | mean x: 1773807277.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | mean y: 2356971.414364641
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | intersect: 3859861060.7048945
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | chi2: 0.010741530356273739
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | current chi2=0.010741530356273739 (change=17.40529012978006 %)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | left removable region: 20
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | sum of square deviations: 1392881930.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | sum of deviations: -124155252.00000057
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | mean x: 1773807399.0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | mean y: 2352803.721212121
[2026-03-18 06:48:01] 2026-03-18 05:47:04,888 | INFO     | intersect: 160462044.62601054
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | chi2: 0.002170483213541073
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | current memory leak: -0.09 B/s (using 165 data points, chi2=0.00)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | could have reported an average CPU frequency of 3548 MHz (10 samples)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | ..............................
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . Timing measurements:
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . get job = 0 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . initial setup = 5 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . payload setup = 4 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . stage-in = 0 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . payload execution = 11642 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . stage-out = 1 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | . log creation = 0 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,889 | INFO     | ..............................
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | 
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | job summary report
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | --------------------------------------------------
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | PanDA job id: 7056899635
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | task id: 49176553
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | errors: (none)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | pilot state: finished 
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | transexitcode: 0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | exeerrorcode: 0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | exeerrordiag: 
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | exitcode: 0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | exitmsg: OK
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | cpuconsumptiontime: 45085 s
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | nevents: 400
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | neventsw: 0
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | pid: 548735
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | pgrp: 548735
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | corecount: 4
[2026-03-18 06:48:01] 2026-03-18 05:47:04,939 | INFO     | event service: False
[2026-03-18 06:48:01] 2026-03-18 05:47:04,940 | INFO     | sizes: {0: 2280314, 11: 2280314, 11650: 2309748, 11651: 2309747, 11652: 2318825, 11656: 2318881, 11658: 2319203}
[2026-03-18 06:48:01] 2026-03-18 05:47:04,940 | INFO     | --------------------------------------------------
[2026-03-18 06:48:01] 2026-03-18 05:47:04,940 | INFO     | 
[2026-03-18 06:48:01] 2026-03-18 05:47:04,940 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/1
[2026-03-18 06:48:01] 2026-03-18 05:47:04,956 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,956 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,956 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | job 7056899635 has completed (purged errors)
[2026-03-18 06:48:01] 2026-03-18 05:47:04,957 | INFO     | overall cleanup function is called
[2026-03-18 06:48:01] 2026-03-18 05:47:05,964 | INFO     | --- collectZombieJob: --- 10, [548735]
[2026-03-18 06:48:01] 2026-03-18 05:47:05,964 | INFO     | zombie collector waiting for pid 548735
[2026-03-18 06:48:01] 2026-03-18 05:47:05,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 06:48:01] 2026-03-18 05:47:05,964 | INFO     | collected zombie processes
[2026-03-18 06:48:01] 2026-03-18 05:47:05,964 | INFO     | will attempt to kill all subprocesses of pid=548735
[2026-03-18 06:48:01] 2026-03-18 05:47:06,427 | INFO     | process IDs to be killed: [548735] (in reverse order)
[2026-03-18 06:48:01] 2026-03-18 05:47:06,678 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 06:48:01] 2026-03-18 05:47:06,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 06:48:01] 2026-03-18 05:47:06,710 | INFO     | did not find any defunct processes belonging to 548735
[2026-03-18 06:48:01] 2026-03-18 05:47:06,740 | INFO     | did not find any defunct processes belonging to 548735
[2026-03-18 06:48:01] 2026-03-18 05:47:06,740 | INFO     | ready for new job
[2026-03-18 06:48:01] 2026-03-18 05:47:06,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 06:48:01] 2026-03-18 05:47:06,741 | INFO     | **************************************
[2026-03-18 06:48:01] 2026-03-18 05:47:06,742 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 06:48:01] 2026-03-18 05:47:06,742 | INFO     | **************************************
[2026-03-18 06:48:01] 2026-03-18 05:47:06,742 | INFO     | 
[2026-03-18 06:48:01] 2026-03-18 05:47:06,747 | INFO     | architecture information:
[2026-03-18 06:48:01] 2026-03-18 05:47:06,747 | INFO     | executing command: cat /etc/os-release
[2026-03-18 06:48:01] 2026-03-18 05:47:06,765 | INFO     | cat /etc/os-release:
[2026-03-18 06:48:01] NAME="CentOS Linux"
[2026-03-18 06:48:01] VERSION="7 (Core)"
[2026-03-18 06:48:01] ID="centos"
[2026-03-18 06:48:01] ID_LIKE="rhel fedora"
[2026-03-18 06:48:01] VERSION_ID="7"
[2026-03-18 06:48:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 06:48:01] ANSI_COLOR="0;31"
[2026-03-18 06:48:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 06:48:01] HOME_URL="https://www.centos.org/"
[2026-03-18 06:48:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 06:48:01] 
[2026-03-18 06:48:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 06:48:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 06:48:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 06:48:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 06:48:01] 
[2026-03-18 06:48:01] 2026-03-18 05:47:06,766 | INFO     | **************************************
[2026-03-18 06:48:01] 2026-03-18 05:47:07,268 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-18 06:48:01] 2026-03-18 05:47:07,285 | INFO     | sufficient remaining disk space (20654850048 B)
[2026-03-18 06:48:01] 2026-03-18 05:47:07,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 06:48:01] 2026-03-18 05:47:07,286 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 06:48:01] 2026-03-18 05:47:07,286 | INFO     | update_server=False
[2026-03-18 06:48:01] 2026-03-18 05:47:07,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 06:48:01] 2026-03-18 05:47:07,337 | INFO     | all job control threads have been joined
[2026-03-18 06:48:01] 2026-03-18 05:47:07,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 06:48:01] 2026-03-18 05:47:08,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:48:01] 2026-03-18 05:47:08,284 | INFO     | aborting loop
[2026-03-18 06:48:01] 2026-03-18 05:47:08,291 | INFO     | [job] retrieve thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:08,342 | INFO     | [job] control thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:08,372 | INFO     | all data control threads have been joined
[2026-03-18 06:48:01] 2026-03-18 05:47:08,451 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:08,462 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:08,594 | INFO     | all payload control threads have been joined
[2026-03-18 06:48:01] 2026-03-18 05:47:08,794 | INFO     | [payload] validate_post thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:08,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 06:48:01] 2026-03-18 05:47:08,859 | INFO     | [payload] failed_post thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,055 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,070 | INFO     | [data] copytool_in thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,289 | INFO     | [job] job monitor thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,377 | INFO     | [data] control thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,599 | INFO     | [payload] control thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,600 | INFO     | [job] validate thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,601 | INFO     | [data] copytool_out thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:09,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:48:01] 2026-03-18 05:47:10,954 | INFO     | [job] queue monitor thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:12,841 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:18,165 | INFO     | job.realtimelogging is not enabled
[2026-03-18 06:48:01] 2026-03-18 05:47:19,170 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 06:48:01] 2026-03-18 05:47:30,435 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-03-18 06:48:01] 2026-03-18 05:47:36,916 | INFO     | PID=537249 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 06:48:01] 2026-03-18 05:47:36,916 | INFO     | .. there are 46 such processes running
[2026-03-18 06:48:01] 2026-03-18 05:47:36,916 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 06:48:01] 2026-03-18 05:47:36,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 06:48:01] 2026-03-18 05:47:36,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 06:48:01] 2026-03-18 05:47:55,212 | INFO     | [monitor] cgroup control has ended
[2026-03-18 06:48:01] 2026-03-18 05:47:56,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23183008003904)>', '<ExcThread(monitor, started 23182762571520)>']
[2026-03-18 06:48:01] 2026-03-18 05:47:57,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 06:48:01] 2026-03-18 05:47:57,020 | INFO     | [monitor] control thread has ended
[2026-03-18 06:48:01] 2026-03-18 05:48:01,239 | INFO     | all workflow threads have been joined
[2026-03-18 06:48:01] 2026-03-18 05:48:01,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 06:48:01] 2026-03-18 05:48:01,239 | INFO     | traces error code: 0
[2026-03-18 06:48:01] 2026-03-18 05:48:01,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 06:48:01] 2026-03-18 05:48:01,348 [wrapper] ==== pilot stdout END ====
[2026-03-18 06:48:01] 2026-03-18 05:48:01,353 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 06:48:01] 2026-03-18 05:48:01,355 [wrapper] pilotpid: 537249
[2026-03-18 06:48:01] 2026-03-18 05:48:01,357 [wrapper] Pilot exit status: 0
[2026-03-18 06:48:01] 2026-03-18 05:48:01,365 [wrapper] pandaids: 7056899635
[2026-03-18 06:48:01] 2026-03-18 05:48:01,493 [wrapper] cleanup supervisor_pilot 1408755 537250
[2026-03-18 06:48:01] 2026-03-18 05:48:01,495 [wrapper] Test setup, not cleaning
[2026-03-18 06:48:01] 2026-03-18 05:48:01,497 [wrapper] apfmon messages muted
[2026-03-18 06:48:01] 2026-03-18 05:48:01,500 [wrapper] ==== wrapper stdout END ====
[2026-03-18 06:48:01] 2026-03-18 05:48:01,501 [wrapper] ==== wrapper stderr END ====
[2026-03-18 06:48:01]  *** Error codes and diagnostics ***
[2026-03-18 06:48:01]     "exeErrorCode": 0,
[2026-03-18 06:48:01]     "exeErrorDiag": "",
[2026-03-18 06:48:01]     "pilotErrorCode": 0,
[2026-03-18 06:48:01]     "pilotErrorDiag": "",
[2026-03-18 06:48:01]  *** Listing of results directory ***
[2026-03-18 06:48:01] total 474648
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc    585013 Mar 16 13:24 pilot3.tar.gz
[2026-03-18 06:48:01] -rwx------. 1 boinc boinc     36322 Mar 16 14:09 runpilot2-wrapper.sh
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:10 queuedata.json
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc       100 Mar 18 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 06:48:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 03:32 run_atlas
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc       105 Mar 18 03:32 job.xml
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc      6709 Mar 18 03:32 init_data.xml
[2026-03-18 06:48:01] -rw-r--r--. 2 boinc boinc 239249051 Mar 18 03:32 EVNT.49134354._000003.pool.root.1
[2026-03-18 06:48:01] -rw-r--r--. 2 boinc boinc     15845 Mar 18 03:32 start_atlas.sh
[2026-03-18 06:48:01] drwxrwx--x. 2 boinc boinc      4096 Mar 18 03:32 shared
[2026-03-18 06:48:01] -rw-r--r--. 2 boinc boinc    597542 Mar 18 03:32 input.tar.gz
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc         0 Mar 18 03:32 boinc_lockfile
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc      2615 Mar 18 03:32 pandaJob.out
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc   1011515 Mar 18 03:32 agis_schedconf.cvmfs.json
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc       444 Mar 18 03:32 workernode_map.json
[2026-03-18 06:48:01] drwx------. 5 boinc boinc      4096 Mar 18 03:32 pilot3
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc 238851780 Mar 18 06:46 HITS.49176553._000055.pool.root.1
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc       530 Mar 18 06:46 boinc_task_state.xml
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc        95 Mar 18 06:46 pilot_heartbeat.json
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc      1032 Mar 18 06:46 memory_monitor_summary.json
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc   1511579 Mar 18 06:46 agis_ddmendpoints.agis.ALL.json
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc    357328 Mar 18 06:46 log.49176553._000055.job.log.tgz.1
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc      6349 Mar 18 06:47 heartbeat.json
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc      8192 Mar 18 06:47 boinc_mmap_file
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc        28 Mar 18 06:47 wrapper_checkpoint.txt
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc      4901 Mar 18 06:48 pilotlog.txt
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc   1638318 Mar 18 06:48 log.49176553._000055.job.log.1
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc       357 Mar 18 06:48 output.list
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc       620 Mar 18 06:48 runtime_log
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc   2017280 Mar 18 06:48 result.tar.gz
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc      9222 Mar 18 06:48 runtime_log.err
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc       665 Mar 18 06:48 X49NDmyrMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9JtLDmst68So.diag
[2026-03-18 06:48:01] -rw-r--r--. 1 boinc boinc     21117 Mar 18 06:48 stderr.txt
[2026-03-18 06:48:01] HITS file was successfully produced:
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc 238851780 Mar 18 06:46 shared/HITS.pool.root.1
[2026-03-18 06:48:01]  *** Contents of shared directory: ***
[2026-03-18 06:48:01] total 469480
[2026-03-18 06:48:01] -rw-r--r--. 2 boinc boinc 239249051 Mar 18 03:32 ATLAS.root_0
[2026-03-18 06:48:01] -rw-r--r--. 2 boinc boinc     15845 Mar 18 03:32 start_atlas.sh
[2026-03-18 06:48:01] -rw-r--r--. 2 boinc boinc    597542 Mar 18 03:32 input.tar.gz
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc 238851780 Mar 18 06:46 HITS.pool.root.1
[2026-03-18 06:48:01] -rw-------. 1 boinc boinc   2017280 Mar 18 06:48 result.tar.gz
06:48:02 (529932): run_atlas exited; CPU time 45646.683408
06:48:02 (529932): called boinc_finish(0)

</stderr_txt>
]]>

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