Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:35:48 (6381): wrapper (7.7.26015): starting
07:35:48 (6381): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 07:35:48] Arguments: --nthreads 8
[2026-03-17 07:35:48] Threads: 8
[2026-03-17 07:35:48] Checking for CVMFS
[2026-03-17 07:35:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 07:35:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 07:35:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 07:35:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 07:35:52] 2.11.2.0 1091 131541 137912 157362 1 53 19521277 25165824 4517 130560 152 43842945 99.833 30018712 1022 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-17 07:35:52] CVMFS is ok
[2026-03-17 07:35:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 07:35:52] Checking for apptainer binary...
[2026-03-17 07:35:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 07:35:52] Running /usr/bin/apptainer --version
[2026-03-17 07:35:52] apptainer version 1.3.2-1.el7
[2026-03-17 07:35:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 07:35:57] cg-vwn498.simple-grid.lan
[2026-03-17 07:35:57] apptainer works
[2026-03-17 07:35:57] Set ATHENA_PROC_NUMBER=8
[2026-03-17 07:35:57] Set ATHENA_CORE_NUMBER=8
[2026-03-17 07:35:57] Starting ATLAS job with PandaID=7056899624
[2026-03-17 07:35:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 16:38:42]  *** The last 200 lines of the pilot log: ***
[2026-03-17 16:38:42] 2026-03-17 15:37:44,764 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,765 | INFO     | reading metadata from: /var/lib/boinc/slots/4/PanDA_Pilot-7056899624/jobReport.json
[2026-03-17 16:38:42] 2026-03-17 15:37:44,767 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/4/workernode_map.json
[2026-03-17 16:38:42] 2026-03-17 15:37:44,767 | INFO     | this job has now completed (state=finished)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,767 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,767 | INFO     | log transfer has been attempted: DONE
[2026-03-17 16:38:42] 2026-03-17 15:37:44,768 | INFO     | job 7056899624 has finished - writing final server update
[2026-03-17 16:38:42] 2026-03-17 15:37:44,768 | INFO     | total number of processed events: 400 (read)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,770 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7056899624/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,770 | INFO     | extracted standard info from prmon json
[2026-03-17 16:38:42] 2026-03-17 15:37:44,770 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 16:38:42] 2026-03-17 15:37:44,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 16:38:42] 2026-03-17 15:37:44,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 16:38:42] 2026-03-17 15:37:44,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 16:38:42] 2026-03-17 15:37:44,780 | INFO     | fitting pss+swap vs Time
[2026-03-17 16:38:42] 2026-03-17 15:37:44,781 | INFO     | sum of square deviations: 44613952775.0
[2026-03-17 16:38:42] 2026-03-17 15:37:44,793 | INFO     | sum of deviations: 187016707839.49994
[2026-03-17 16:38:42] 2026-03-17 15:37:44,794 | INFO     | mean x: 1773745886.5
[2026-03-17 16:38:42] 2026-03-17 15:37:44,794 | INFO     | mean y: 2488556.169847328
[2026-03-17 16:38:42] 2026-03-17 15:37:44,794 | INFO     | intersect: -7432856119.744387
[2026-03-17 16:38:42] 2026-03-17 15:37:44,794 | INFO     | chi2: 4.805175347513644
[2026-03-17 16:38:42] 2026-03-17 15:37:44,795 | INFO     | sum of square deviations: 43348980220.0
[2026-03-17 16:38:42] 2026-03-17 15:37:44,803 | INFO     | sum of deviations: 219402947857.0
[2026-03-17 16:38:42] 2026-03-17 15:37:44,803 | INFO     | mean x: 1773745734.0
[2026-03-17 16:38:42] 2026-03-17 15:37:44,803 | INFO     | mean y: 2492428.077071291
[2026-03-17 16:38:42] 2026-03-17 15:37:44,804 | INFO     | intersect: -8974997718.480711
[2026-03-17 16:38:42] 2026-03-17 15:37:44,804 | INFO     | chi2: 4.047618110946345
[2026-03-17 16:38:42] 2026-03-17 15:37:44,805 | INFO     | current chi2=4.047618110946345 (change=15.765444167594916 %)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,805 | INFO     | right removable region: 518
[2026-03-17 16:38:42] 2026-03-17 15:37:44,810 | INFO     | sum of square deviations: 43348980220.0
[2026-03-17 16:38:42] 2026-03-17 15:37:44,817 | INFO     | sum of deviations: 17587678417.0
[2026-03-17 16:38:42] 2026-03-17 15:37:44,817 | INFO     | mean x: 1773746039.0
[2026-03-17 16:38:42] 2026-03-17 15:37:44,817 | INFO     | mean y: 2508964.7784200385
[2026-03-17 16:38:42] 2026-03-17 15:37:44,817 | INFO     | intersect: -717140604.1165489
[2026-03-17 16:38:42] 2026-03-17 15:37:44,818 | INFO     | chi2: 0.9875757401202524
[2026-03-17 16:38:42] 2026-03-17 15:37:44,818 | INFO     | current chi2=0.9875757401202524 (change=79.44766488841543 %)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,819 | INFO     | sum of square deviations: 42108147652.5
[2026-03-17 16:38:42] 2026-03-17 15:37:44,836 | INFO     | sum of deviations: -8670114829.999996
[2026-03-17 16:38:42] 2026-03-17 15:37:44,836 | INFO     | mean x: 1773746191.5
[2026-03-17 16:38:42] 2026-03-17 15:37:44,837 | INFO     | mean y: 2512178.7509727627
[2026-03-17 16:38:42] 2026-03-17 15:37:44,837 | INFO     | intersect: 367728509.0083101
[2026-03-17 16:38:42] 2026-03-17 15:37:44,837 | INFO     | chi2: 0.846073932543285
[2026-03-17 16:38:42] 2026-03-17 15:37:44,850 | INFO     | current chi2=0.846073932543285 (change=14.328198013424004 %)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,850 | INFO     | left removable region: 20
[2026-03-17 16:38:42] 2026-03-17 15:37:44,851 | INFO     | sum of square deviations: 38296995264.5
[2026-03-17 16:38:42] 2026-03-17 15:37:44,858 | INFO     | sum of deviations: 46479194243.99999
[2026-03-17 16:38:42] 2026-03-17 15:37:44,858 | INFO     | mean x: 1773746313.5
[2026-03-17 16:38:42] 2026-03-17 15:37:44,858 | INFO     | mean y: 2513505.81124498
[2026-03-17 16:38:42] 2026-03-17 15:37:44,858 | INFO     | intersect: -2150195835.361706
[2026-03-17 16:38:42] 2026-03-17 15:37:44,859 | INFO     | chi2: 0.004879415996020886
[2026-03-17 16:38:42] 2026-03-17 15:37:44,859 | INFO     | current memory leak: 1.21 B/s (using 498 data points, chi2=0.00)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,860 | INFO     | could have reported an average CPU frequency of 2249 MHz (21 samples)
[2026-03-17 16:38:42] 2026-03-17 15:37:44,860 | INFO     | ..............................
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . Timing measurements:
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . get job = 0 s
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . initial setup = 104 s
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . payload setup = 114 s
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . stage-in = 0 s
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . payload execution = 32032 s
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . stage-out = 3 s
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | . log creation = 1 s
[2026-03-17 16:38:42] 2026-03-17 15:37:44,861 | INFO     | ..............................
[2026-03-17 16:38:42] 2026-03-17 15:37:45,374 | INFO     | 
[2026-03-17 16:38:42] 2026-03-17 15:37:45,374 | INFO     | job summary report
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | --------------------------------------------------
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | PanDA job id: 7056899624
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | task id: 49176553
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | errors: (none)
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | pilot state: finished 
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | transexitcode: 0
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | exeerrorcode: 0
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | exeerrordiag: 
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | exitcode: 0
[2026-03-17 16:38:42] 2026-03-17 15:37:45,375 | INFO     | exitmsg: OK
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | cpuconsumptiontime: 126621 s
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | nevents: 400
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | neventsw: 0
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | pid: 14987
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | pgrp: 14987
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | corecount: 8
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | event service: False
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | sizes: {0: 2279869, 1: 2280330, 12: 2280330, 32150: 2318872, 32151: 2318871, 32154: 2328109, 32156: 2328247}
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | --------------------------------------------------
[2026-03-17 16:38:42] 2026-03-17 15:37:45,376 | INFO     | 
[2026-03-17 16:38:42] 2026-03-17 15:37:45,377 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-17 16:38:42] 2026-03-17 15:37:45,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,787 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,787 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,787 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,789 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 16:38:42] 2026-03-17 15:37:45,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,789 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 16:38:42] 2026-03-17 15:37:45,789 | INFO     | job 7056899624 has completed (purged errors)
[2026-03-17 16:38:42] 2026-03-17 15:37:45,789 | INFO     | overall cleanup function is called
[2026-03-17 16:38:42] 2026-03-17 15:37:46,797 | INFO     | --- collectZombieJob: --- 10, [14987]
[2026-03-17 16:38:42] 2026-03-17 15:37:46,797 | INFO     | zombie collector waiting for pid 14987
[2026-03-17 16:38:42] 2026-03-17 15:37:46,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 16:38:42] 2026-03-17 15:37:46,798 | INFO     | collected zombie processes
[2026-03-17 16:38:42] 2026-03-17 15:37:46,798 | INFO     | will attempt to kill all subprocesses of pid=14987
[2026-03-17 16:38:42] 2026-03-17 15:37:46,927 | INFO     | process IDs to be killed: [14987] (in reverse order)
[2026-03-17 16:38:42] 2026-03-17 15:37:47,641 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 16:38:42] 2026-03-17 15:37:47,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 16:38:42] 2026-03-17 15:37:47,644 | INFO     | did not find any defunct processes belonging to 14987
[2026-03-17 16:38:42] 2026-03-17 15:37:47,647 | INFO     | did not find any defunct processes belonging to 14987
[2026-03-17 16:38:42] 2026-03-17 15:37:47,647 | INFO     | ready for new job
[2026-03-17 16:38:42] 2026-03-17 15:37:47,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 16:38:42] 2026-03-17 15:37:47,650 | INFO     | **************************************
[2026-03-17 16:38:42] 2026-03-17 15:37:47,650 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 16:38:42] 2026-03-17 15:37:47,650 | INFO     | **************************************
[2026-03-17 16:38:42] 2026-03-17 15:37:47,650 | INFO     | 
[2026-03-17 16:38:42] 2026-03-17 15:37:47,651 | INFO     | pilot is running in a VM
[2026-03-17 16:38:42] 2026-03-17 15:37:47,651 | INFO     | architecture information:
[2026-03-17 16:38:42] 2026-03-17 15:37:47,658 | INFO     | executing command: cat /etc/os-release
[2026-03-17 16:38:42] 2026-03-17 15:37:47,932 | INFO     | cat /etc/os-release:
[2026-03-17 16:38:42] NAME="CentOS Linux"
[2026-03-17 16:38:42] VERSION="7 (Core)"
[2026-03-17 16:38:42] ID="centos"
[2026-03-17 16:38:42] ID_LIKE="rhel fedora"
[2026-03-17 16:38:42] VERSION_ID="7"
[2026-03-17 16:38:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 16:38:42] ANSI_COLOR="0;31"
[2026-03-17 16:38:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 16:38:42] HOME_URL="https://www.centos.org/"
[2026-03-17 16:38:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 16:38:42] 
[2026-03-17 16:38:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 16:38:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 16:38:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 16:38:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 16:38:42] 
[2026-03-17 16:38:42] 2026-03-17 15:37:47,932 | INFO     | **************************************
[2026-03-17 16:38:42] 2026-03-17 15:37:48,435 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-17 16:38:42] 2026-03-17 15:37:48,681 | INFO     | sufficient remaining disk space (496795385856 B)
[2026-03-17 16:38:42] 2026-03-17 15:37:48,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 16:38:42] 2026-03-17 15:37:48,681 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 16:38:42] 2026-03-17 15:37:48,681 | INFO     | update_server=False
[2026-03-17 16:38:42] 2026-03-17 15:37:48,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 16:38:42] 2026-03-17 15:37:48,781 | INFO     | all job control threads have been joined
[2026-03-17 16:38:42] 2026-03-17 15:37:48,894 | INFO     | all payload control threads have been joined
[2026-03-17 16:38:42] 2026-03-17 15:37:48,922 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 16:38:42] 2026-03-17 15:37:48,923 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 16:38:42] 2026-03-17 15:37:48,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 16:38:42] 2026-03-17 15:37:48,923 | INFO     | will abort loop
[2026-03-17 16:38:42] 2026-03-17 15:37:49,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 16:38:42] 2026-03-17 15:37:49,493 | INFO     | all data control threads have been joined
[2026-03-17 16:38:42] 2026-03-17 15:37:49,687 | INFO     | [job] retrieve thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:49,689 | INFO     | [payload] failed_post thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:49,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 16:38:42] 2026-03-17 15:37:49,773 | INFO     | [data] copytool_in thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:49,787 | INFO     | [job] control thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:49,854 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:49,899 | INFO     | [payload] control thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:49,929 | INFO     | [job] job monitor thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:49,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:50,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 16:38:42] 2026-03-17 15:37:50,218 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:50,363 | INFO     | [job] validate thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:50,499 | INFO     | [data] control thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:50,599 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:50,669 | INFO     | [payload] validate_post thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:51,019 | INFO     | [job] queue monitor thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:51,115 | INFO     | [data] copytool_out thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:37:53,747 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 16:38:42] 2026-03-17 15:38:17,391 | INFO     | PID=10485 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-17 16:38:42] 2026-03-17 15:38:17,391 | INFO     | .. there are 9 such processes running
[2026-03-17 16:38:42] 2026-03-17 15:38:17,391 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 16:38:42] 2026-03-17 15:38:17,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 16:38:42] 2026-03-17 15:38:17,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 16:38:42] 2026-03-17 15:38:31,635 | INFO     | [monitor] cgroup control has ended
[2026-03-17 16:38:42] 2026-03-17 15:38:33,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157724112704)>', '<ExcThread(monitor, started 140157424477952)>']
[2026-03-17 16:38:42] 2026-03-17 15:38:33,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 16:38:42] 2026-03-17 15:38:33,486 | INFO     | [monitor] control thread has ended
[2026-03-17 16:38:42] 2026-03-17 15:38:38,330 | INFO     | all workflow threads have been joined
[2026-03-17 16:38:42] 2026-03-17 15:38:38,330 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 16:38:42] 2026-03-17 15:38:38,331 | INFO     | traces error code: 0
[2026-03-17 16:38:42] 2026-03-17 15:38:38,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 16:38:42] 2026-03-17 15:38:38,732 [wrapper] ==== pilot stdout END ====
[2026-03-17 16:38:42] 2026-03-17 15:38:38,765 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 16:38:42] 2026-03-17 15:38:38,823 [wrapper] pilotpid: 10485
[2026-03-17 16:38:42] 2026-03-17 15:38:38,868 [wrapper] Pilot exit status: 0
[2026-03-17 16:38:42] 2026-03-17 15:38:39,283 [wrapper] pandaids: 7056899624
[2026-03-17 16:38:42] 2026-03-17 15:38:40,001 [wrapper] cleanup supervisor_pilot 19200 10486
[2026-03-17 16:38:42] 2026-03-17 15:38:40,052 [wrapper] Test setup, not cleaning
[2026-03-17 16:38:42] 2026-03-17 15:38:40,109 [wrapper] apfmon messages muted
[2026-03-17 16:38:42] 2026-03-17 15:38:40,212 [wrapper] ==== wrapper stdout END ====
[2026-03-17 16:38:42] 2026-03-17 15:38:40,306 [wrapper] ==== wrapper stderr END ====
[2026-03-17 16:38:42]  *** Error codes and diagnostics ***
[2026-03-17 16:38:42]     "exeErrorCode": 0,
[2026-03-17 16:38:42]     "exeErrorDiag": "",
[2026-03-17 16:38:42]     "pilotErrorCode": 0,
[2026-03-17 16:38:42]     "pilotErrorDiag": "",
[2026-03-17 16:38:42]  *** Listing of results directory ***
[2026-03-17 16:38:42] total 481296
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc    585013 Mar 16 13:24 pilot3.tar.gz
[2026-03-17 16:38:42] -rwx------. 1 boinc boinc     36322 Mar 16 14:09 runpilot2-wrapper.sh
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:10 queuedata.json
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc       100 Mar 17 07:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 16:38:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 07:35 run_atlas
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc       105 Mar 17 07:35 job.xml
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc      6391 Mar 17 07:35 init_data.xml
[2026-03-17 16:38:42] -rw-r--r--. 2 boinc boinc 240226925 Mar 17 07:35 EVNT.49134354._000002.pool.root.1
[2026-03-17 16:38:42] -rw-r--r--. 2 boinc boinc     15845 Mar 17 07:35 start_atlas.sh
[2026-03-17 16:38:42] drwxrwx--x. 2 boinc boinc        68 Mar 17 07:35 shared
[2026-03-17 16:38:42] -rw-r--r--. 2 boinc boinc    597544 Mar 17 07:35 input.tar.gz
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc         0 Mar 17 07:35 boinc_lockfile
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc      2615 Mar 17 07:35 pandaJob.out
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc       415 Mar 17 07:41 workernode_map.json
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc   1005652 Mar 17 07:41 agis_schedconf.cvmfs.json
[2026-03-17 16:38:42] drwx------. 5 boinc boinc      4096 Mar 17 07:41 pilot3
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc 238326403 Mar 17 16:36 HITS.49176553._000044.pool.root.1
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc       531 Mar 17 16:36 boinc_task_state.xml
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc      1031 Mar 17 16:37 memory_monitor_summary.json
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc   1511579 Mar 17 16:37 agis_ddmendpoints.agis.ALL.json
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc    720965 Mar 17 16:37 log.49176553._000044.job.log.tgz.1
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc        95 Mar 17 16:37 pilot_heartbeat.json
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc      6311 Mar 17 16:37 heartbeat.json
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc      8192 Mar 17 16:38 boinc_mmap_file
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc        29 Mar 17 16:38 wrapper_checkpoint.txt
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc      5066 Mar 17 16:38 pilotlog.txt
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc   4461506 Mar 17 16:38 log.49176553._000044.job.log.1
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc       357 Mar 17 16:38 output.list
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc       620 Mar 17 16:38 runtime_log
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc   5201920 Mar 17 16:38 result.tar.gz
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc       658 Mar 17 16:38 tzUNDmyrMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzJtLDm6PXk5n.diag
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc      8816 Mar 17 16:38 runtime_log.err
[2026-03-17 16:38:42] -rw-r--r--. 1 boinc boinc     20915 Mar 17 16:38 stderr.txt
[2026-03-17 16:38:42] HITS file was successfully produced:
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc 238326403 Mar 17 16:36 shared/HITS.pool.root.1
[2026-03-17 16:38:42]  *** Contents of shared directory: ***
[2026-03-17 16:38:42] total 473024
[2026-03-17 16:38:42] -rw-r--r--. 2 boinc boinc 240226925 Mar 17 07:35 ATLAS.root_0
[2026-03-17 16:38:42] -rw-r--r--. 2 boinc boinc     15845 Mar 17 07:35 start_atlas.sh
[2026-03-17 16:38:42] -rw-r--r--. 2 boinc boinc    597544 Mar 17 07:35 input.tar.gz
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc 238326403 Mar 17 16:36 HITS.pool.root.1
[2026-03-17 16:38:42] -rw-------. 1 boinc boinc   5201920 Mar 17 16:38 result.tar.gz
16:38:44 (6381): run_atlas exited; CPU time 127093.702574
16:38:44 (6381): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN