Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:43 (2918832): wrapper (7.7.26015): starting
09:29:43 (2918832): wrapper: running run_atlas (--nthreads 9)
[2026-03-16 09:29:43] Arguments: --nthreads 9
[2026-03-16 09:29:43] Threads: 9
[2026-03-16 09:29:43] Checking for CVMFS
[2026-03-16 09:29:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 09:29:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 09:29:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 09:29:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 09:29:45] 2.13.3.0 1959709 112059 413980 157351 2 339 30264391 40960000 9596 16776704 0 137857777 99.511 191088799 31174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 09:29:45] CVMFS is ok
[2026-03-16 09:29:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 09:29:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 09:29:45] Further information can be found at the LHC@home message board.
[2026-03-16 09:29:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 09:29:45] Checking for apptainer binary...
[2026-03-16 09:29:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 09:29:45] Running /usr/bin/apptainer --version
[2026-03-16 09:29:45] apptainer version 1.4.5-2.el9
[2026-03-16 09:29:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 09:29:45] c-210-8.aglt2.org
[2026-03-16 09:29:45] apptainer works
[2026-03-16 09:29:45] Set ATHENA_PROC_NUMBER=9
[2026-03-16 09:29:45] Set ATHENA_CORE_NUMBER=9
[2026-03-16 09:29:45] Starting ATLAS job with PandaID=7056889056
[2026-03-16 09:29:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:28:18 (3491689): wrapper (7.7.26015): starting
15:28:18 (3491689): wrapper: running run_atlas (--nthreads 10)
[2026-03-16 15:28:18] Arguments: --nthreads 10
[2026-03-16 15:28:18] Threads: 10
[2026-03-16 15:28:18] This job has been restarted, cleaning up previous attempt
[2026-03-16 15:28:18] Checking for CVMFS
[2026-03-16 15:28:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 15:28:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 15:28:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 15:28:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 15:28:19] 2.13.3.0 1959709 112418 436408 157351 3 925 34074547 40960000 11076 16776704 0 138099648 99.507 192064451 31165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 15:28:19] CVMFS is ok
[2026-03-16 15:28:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 15:28:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 15:28:19] Further information can be found at the LHC@home message board.
[2026-03-16 15:28:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 15:28:19] Checking for apptainer binary...
[2026-03-16 15:28:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 15:28:19] Running /usr/bin/apptainer --version
[2026-03-16 15:28:19] apptainer version 1.4.5-2.el9
[2026-03-16 15:28:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 15:28:19] c-210-8.aglt2.org
[2026-03-16 15:28:19] apptainer works
[2026-03-16 15:28:19] Set ATHENA_PROC_NUMBER=10
[2026-03-16 15:28:19] Set ATHENA_CORE_NUMBER=10
[2026-03-16 15:28:19] Starting ATLAS job with PandaID=7056889056
[2026-03-16 15:28:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 18:19:56]  *** The last 200 lines of the pilot log: ***
[2026-03-17 18:19:56] 2026-03-17 22:19:16,676 | INFO     | extracted standard info from prmon json
[2026-03-17 18:19:56] 2026-03-17 22:19:16,676 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 18:19:56] 2026-03-17 22:19:16,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 18:19:56] 2026-03-17 22:19:16,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 18:19:56] 2026-03-17 22:19:16,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 18:19:56] 2026-03-17 22:19:16,753 | INFO     | fitting pss+swap vs Time
[2026-03-17 18:19:56] 2026-03-17 22:19:16,768 | INFO     | sum of square deviations: 1232388021281.4678
[2026-03-17 18:19:56] 2026-03-17 22:19:16,873 | INFO     | time since job start (96646s) is within the limit (345600.0s)
[2026-03-17 18:19:56] 2026-03-17 22:19:16,940 | INFO     | monitor loop #5012: job 0:7056889056 is in state 'finished'
[2026-03-17 18:19:56] 2026-03-17 22:19:16,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-17 18:19:56] 2026-03-17 22:19:17,009 | INFO     | sum of deviations: -1158615190473.6816
[2026-03-17 18:19:56] 2026-03-17 22:19:17,009 | INFO     | mean x: 1773737614.5183082
[2026-03-17 18:19:56] 2026-03-17 22:19:17,009 | INFO     | mean y: 2646924.506313131
[2026-03-17 18:19:56] 2026-03-17 22:19:17,009 | INFO     | intersect: 1670205606.1937094
[2026-03-17 18:19:56] 2026-03-17 22:19:17,011 | INFO     | chi2: 2.505753073360999
[2026-03-17 18:19:56] 2026-03-17 22:19:17,018 | INFO     | sum of square deviations: 1220755067211.2678
[2026-03-17 18:19:56] 2026-03-17 22:19:17,199 | INFO     | sum of deviations: -1048655416708.223
[2026-03-17 18:19:56] 2026-03-17 22:19:17,200 | INFO     | mean x: 1773737462.0215325
[2026-03-17 18:19:56] 2026-03-17 22:19:17,208 | INFO     | mean y: 2648362.4477517414
[2026-03-17 18:19:56] 2026-03-17 22:19:17,208 | INFO     | intersect: 1526327802.5964706
[2026-03-17 18:19:56] 2026-03-17 22:19:17,210 | INFO     | chi2: 1.8068604788468823
[2026-03-17 18:19:56] 2026-03-17 22:19:17,211 | INFO     | current chi2=1.8068604788468823 (change=27.891518998585248 %)
[2026-03-17 18:19:56] 2026-03-17 22:19:17,221 | INFO     | sum of square deviations: 1209195460182.583
[2026-03-17 18:19:56] 2026-03-17 22:19:17,416 | INFO     | sum of deviations: -1045664557342.8555
[2026-03-17 18:19:56] 2026-03-17 22:19:17,416 | INFO     | mean x: 1773737309.5241423
[2026-03-17 18:19:56] 2026-03-17 22:19:17,417 | INFO     | mean y: 2648401.9040660737
[2026-03-17 18:19:56] 2026-03-17 22:19:17,417 | INFO     | intersect: 1536506491.5846322
[2026-03-17 18:19:56] 2026-03-17 22:19:17,427 | INFO     | chi2: 1.8060500584878436
[2026-03-17 18:19:56] 2026-03-17 22:19:17,427 | INFO     | current chi2=1.8060500584878436 (change=0.04485240385333277 %)
[2026-03-17 18:19:56] 2026-03-17 22:19:17,428 | INFO     | right removable region: 1573
[2026-03-17 18:19:56] 2026-03-17 22:19:17,438 | INFO     | sum of square deviations: 1220754083281.267
[2026-03-17 18:19:56] 2026-03-17 22:19:17,667 | INFO     | sum of deviations: -1427570218615.6016
[2026-03-17 18:19:56] 2026-03-17 22:19:17,696 | INFO     | mean x: 1773737767.0215325
[2026-03-17 18:19:56] 2026-03-17 22:19:17,696 | INFO     | mean y: 2650445.753008233
[2026-03-17 18:19:56] 2026-03-17 22:19:17,696 | INFO     | intersect: 2076889022.147975
[2026-03-17 18:19:56] 2026-03-17 22:19:17,698 | INFO     | chi2: 1.092047342407523
[2026-03-17 18:19:56] 2026-03-17 22:19:17,699 | INFO     | current chi2=1.092047342407523 (change=56.41839756609593 %)
[2026-03-17 18:19:56] 2026-03-17 22:19:17,714 | INFO     | sum of square deviations: 1209193588518.5337
[2026-03-17 18:19:56] 2026-03-17 22:19:17,943 | INFO     | sum of deviations: -1491297867016.6677
[2026-03-17 18:19:56] 2026-03-17 22:19:17,943 | INFO     | mean x: 1773737919.5247777
[2026-03-17 18:19:56] 2026-03-17 22:19:17,944 | INFO     | mean y: 2651285.876111817
[2026-03-17 18:19:56] 2026-03-17 22:19:17,944 | INFO     | intersect: 2190201402.8715754
[2026-03-17 18:19:56] 2026-03-17 22:19:17,954 | INFO     | chi2: 1.0088529585691057
[2026-03-17 18:19:56] 2026-03-17 22:19:17,954 | INFO     | current chi2=1.0088529585691057 (change=7.618203040081328 %)
[2026-03-17 18:19:56] 2026-03-17 22:19:17,954 | INFO     | left removable region: 20
[2026-03-17 18:19:56] 2026-03-17 22:19:17,957 | INFO     | sum of square deviations: 1161438237013.8345
[2026-03-17 18:19:56] 2026-03-17 22:19:18,151 | INFO     | sum of deviations: -1343918287922.7249
[2026-03-17 18:19:56] 2026-03-17 22:19:18,152 | INFO     | mean x: 1773737889.037347
[2026-03-17 18:19:56] 2026-03-17 22:19:18,152 | INFO     | mean y: 2652375.426271732
[2026-03-17 18:19:56] 2026-03-17 22:19:18,152 | INFO     | intersect: 2055072134.9027677
[2026-03-17 18:19:56] 2026-03-17 22:19:18,162 | INFO     | chi2: 0.3051744401441799
[2026-03-17 18:19:56] 2026-03-17 22:19:18,163 | INFO     | current memory leak: -1.16 B/s (using 1553 data points, chi2=0.31)
[2026-03-17 18:19:56] 2026-03-17 22:19:18,164 | INFO     | could have reported an average CPU frequency of 2613 MHz (57 samples)
[2026-03-17 18:19:56] 2026-03-17 22:19:18,164 | INFO     | ..............................
[2026-03-17 18:19:56] 2026-03-17 22:19:18,164 | INFO     | . Timing measurements:
[2026-03-17 18:19:56] 2026-03-17 22:19:18,164 | INFO     | . get job = 0 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,165 | INFO     | . initial setup = 2 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,165 | INFO     | . payload setup = 5 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,173 | INFO     | . stage-in = 0 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,173 | INFO     | . payload execution = 96616 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,173 | INFO     | . stage-out = 5 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,173 | INFO     | . log creation = 0 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,173 | INFO     | ..............................
[2026-03-17 18:19:56] 2026-03-17 22:19:18,560 | INFO     | 
[2026-03-17 18:19:56] 2026-03-17 22:19:18,560 | INFO     | job summary report
[2026-03-17 18:19:56] 2026-03-17 22:19:18,560 | INFO     | --------------------------------------------------
[2026-03-17 18:19:56] 2026-03-17 22:19:18,560 | INFO     | PanDA job id: 7056889056
[2026-03-17 18:19:56] 2026-03-17 22:19:18,560 | INFO     | task id: 49176178
[2026-03-17 18:19:56] 2026-03-17 22:19:18,560 | INFO     | errors: (none)
[2026-03-17 18:19:56] 2026-03-17 22:19:18,560 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | pilot state: finished 
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | transexitcode: 0
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | exeerrorcode: 0
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | exeerrordiag: 
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | exitcode: 0
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | exitmsg: OK
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | cpuconsumptiontime: 146114 s
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | nevents: 400
[2026-03-17 18:19:56] 2026-03-17 22:19:18,561 | INFO     | neventsw: 0
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | pid: 3504565
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | pgrp: 3504565
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | corecount: 10
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | event service: False
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | sizes: {0: 2279871, 1: 2280332, 12: 2280332, 96625: 2348218, 96626: 2348217, 96633: 2357455, 96636: 2357593}
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | --------------------------------------------------
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | 
[2026-03-17 18:19:56] 2026-03-17 22:19:18,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-17 18:19:56] 2026-03-17 22:19:18,649 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,649 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 18:19:56] 2026-03-17 22:19:18,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 18:19:56] 2026-03-17 22:19:18,652 | INFO     | job 7056889056 has completed (purged errors)
[2026-03-17 18:19:56] 2026-03-17 22:19:18,652 | INFO     | overall cleanup function is called
[2026-03-17 18:19:56] 2026-03-17 22:19:19,670 | INFO     | --- collectZombieJob: --- 10, [3504565]
[2026-03-17 18:19:56] 2026-03-17 22:19:19,670 | INFO     | zombie collector waiting for pid 3504565
[2026-03-17 18:19:56] 2026-03-17 22:19:19,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 18:19:56] 2026-03-17 22:19:19,670 | INFO     | collected zombie processes
[2026-03-17 18:19:56] 2026-03-17 22:19:19,670 | INFO     | will attempt to kill all subprocesses of pid=3504565
[2026-03-17 18:19:56] 2026-03-17 22:19:20,654 | INFO     | process IDs to be killed: [3504565] (in reverse order)
[2026-03-17 18:19:56] 2026-03-17 22:19:20,829 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 18:19:56] 2026-03-17 22:19:20,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 18:19:56] 2026-03-17 22:19:20,854 | INFO     | did not find any defunct processes belonging to 3504565
[2026-03-17 18:19:56] 2026-03-17 22:19:20,878 | INFO     | did not find any defunct processes belonging to 3504565
[2026-03-17 18:19:56] 2026-03-17 22:19:20,878 | INFO     | ready for new job
[2026-03-17 18:19:56] 2026-03-17 22:19:20,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 18:19:56] 2026-03-17 22:19:20,961 | INFO     | **************************************
[2026-03-17 18:19:56] 2026-03-17 22:19:20,962 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 18:19:56] 2026-03-17 22:19:20,962 | INFO     | **************************************
[2026-03-17 18:19:56] 2026-03-17 22:19:20,962 | INFO     | 
[2026-03-17 18:19:56] 2026-03-17 22:19:21,008 | INFO     | architecture information:
[2026-03-17 18:19:56] 2026-03-17 22:19:21,031 | INFO     | executing command: cat /etc/os-release
[2026-03-17 18:19:56] 2026-03-17 22:19:21,131 | INFO     | cat /etc/os-release:
[2026-03-17 18:19:56] NAME="CentOS Linux"
[2026-03-17 18:19:56] VERSION="7 (Core)"
[2026-03-17 18:19:56] ID="centos"
[2026-03-17 18:19:56] ID_LIKE="rhel fedora"
[2026-03-17 18:19:56] VERSION_ID="7"
[2026-03-17 18:19:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 18:19:56] ANSI_COLOR="0;31"
[2026-03-17 18:19:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 18:19:56] HOME_URL="https://www.centos.org/"
[2026-03-17 18:19:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 18:19:56] 
[2026-03-17 18:19:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 18:19:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 18:19:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 18:19:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 18:19:56] 
[2026-03-17 18:19:56] 2026-03-17 22:19:21,132 | INFO     | **************************************
[2026-03-17 18:19:56] 2026-03-17 22:19:21,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-17 18:19:56] 2026-03-17 22:19:21,705 | INFO     | sufficient remaining disk space (61893246976 B)
[2026-03-17 18:19:56] 2026-03-17 22:19:21,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 18:19:56] 2026-03-17 22:19:21,706 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 18:19:56] 2026-03-17 22:19:21,706 | INFO     | update_server=False
[2026-03-17 18:19:56] 2026-03-17 22:19:21,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 18:19:56] 2026-03-17 22:19:21,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 18:19:56] 2026-03-17 22:19:21,780 | INFO     | all data control threads have been joined
[2026-03-17 18:19:56] 2026-03-17 22:19:22,016 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 18:19:56] 2026-03-17 22:19:22,016 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 18:19:56] 2026-03-17 22:19:22,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 18:19:56] 2026-03-17 22:19:22,016 | INFO     | will abort loop
[2026-03-17 18:19:56] 2026-03-17 22:19:22,147 | INFO     | all job control threads have been joined
[2026-03-17 18:19:56] 2026-03-17 22:19:22,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 18:19:56] 2026-03-17 22:19:22,712 | INFO     | [job] retrieve thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:22,787 | INFO     | [data] control thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:22,836 | INFO     | all payload control threads have been joined
[2026-03-17 18:19:56] 2026-03-17 22:19:22,919 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:22,929 | INFO     | [job] validate thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,022 | INFO     | [job] job monitor thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,034 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,153 | INFO     | [job] control thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,478 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 18:19:56] 2026-03-17 22:19:23,714 | INFO     | [data] copytool_out thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,842 | INFO     | [payload] control thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,985 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:23,985 | INFO     | [data] copytool_in thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:24,204 | INFO     | [payload] validate_post thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:24,227 | INFO     | [payload] failed_post thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:24,596 | INFO     | [job] queue monitor thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:26,335 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 18:19:56] 2026-03-17 22:19:49,033 | INFO     | [monitor] cgroup control has ended
[2026-03-17 18:19:56] 2026-03-17 22:19:49,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944441001792)>', '<ExcThread(monitor, started 139944077006592)>']
[2026-03-17 18:19:56] 2026-03-17 22:19:51,587 | INFO     | PID=3499446 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 18:19:56] 2026-03-17 22:19:51,587 | INFO     | .. there are 18 such processes running
[2026-03-17 18:19:56] 2026-03-17 22:19:51,588 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 18:19:56] 2026-03-17 22:19:51,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 18:19:56] 2026-03-17 22:19:51,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 18:19:56] 2026-03-17 22:19:51,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 18:19:56] 2026-03-17 22:19:51,588 | INFO     | [monitor] control thread has ended
[2026-03-17 18:19:56] 2026-03-17 22:19:54,696 | INFO     | all workflow threads have been joined
[2026-03-17 18:19:56] 2026-03-17 22:19:54,696 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 18:19:56] 2026-03-17 22:19:54,696 | INFO     | traces error code: 0
[2026-03-17 18:19:56] 2026-03-17 22:19:54,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 18:19:56] 2026-03-17 22:19:55,078 [wrapper] ==== pilot stdout END ====
[2026-03-17 18:19:56] 2026-03-17 22:19:55,101 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 18:19:56] 2026-03-17 22:19:55,119 [wrapper] pilotpid: 3499446
[2026-03-17 18:19:56] 2026-03-17 22:19:55,141 [wrapper] Pilot exit status: 0
[2026-03-17 18:19:56] 2026-03-17 22:19:55,303 [wrapper] pandaids: 7056889056 7056889056
[2026-03-17 18:19:56] 2026-03-17 22:19:55,456 [wrapper] cleanup supervisor_pilot 2176303 3499447
[2026-03-17 18:19:56] 2026-03-17 22:19:55,471 [wrapper] Test setup, not cleaning
[2026-03-17 18:19:56] 2026-03-17 22:19:55,515 [wrapper] apfmon messages muted
[2026-03-17 18:19:56] 2026-03-17 22:19:55,535 [wrapper] ==== wrapper stdout END ====
[2026-03-17 18:19:56] 2026-03-17 22:19:55,560 [wrapper] ==== wrapper stderr END ====
[2026-03-17 18:19:56]  *** Error codes and diagnostics ***
[2026-03-17 18:19:56]     "exeErrorCode": 0,
[2026-03-17 18:19:56]     "exeErrorDiag": "",
[2026-03-17 18:19:56]     "pilotErrorCode": 0,
[2026-03-17 18:19:56]     "pilotErrorDiag": "",
[2026-03-17 18:19:56]  *** Listing of results directory ***
[2026-03-17 18:19:56] total 735716
[2026-03-17 18:19:56] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 08:24 pilot3.tar.gz
[2026-03-17 18:19:56] -rwx------. 1 boincer umatlas     36322 Mar 16 08:55 runpilot2-wrapper.sh
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 08:58 queuedata.json
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas       100 Mar 16 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 18:19:56] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 16 09:29 run_atlas
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas       105 Mar 16 09:29 job.xml
[2026-03-17 18:19:56] -rw-r--r--. 3 boincer umatlas 243520253 Mar 16 09:29 EVNT.49132862._000001.pool.root.1
[2026-03-17 18:19:56] -rw-r--r--. 3 boincer umatlas 243520253 Mar 16 09:29 ATLAS.root_0
[2026-03-17 18:19:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 09:29 start_atlas.sh
[2026-03-17 18:19:56] drwxrwx--x. 2 boincer umatlas      4096 Mar 16 09:29 shared
[2026-03-17 18:19:56] -rw-r--r--. 2 boincer umatlas    597532 Mar 16 09:29 input.tar.gz
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas         0 Mar 16 09:29 boinc_lockfile
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas      2618 Mar 16 15:28 pandaJob.out
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas        57 Mar 16 15:28 setup.sh.local
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas   1006429 Mar 16 15:28 agis_schedconf.cvmfs.json
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas       435 Mar 16 15:28 workernode_map.json
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas      6616 Mar 17 18:13 init_data.xml
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas 237727501 Mar 17 18:17 HITS.49176178._000021.pool.root.1
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas       532 Mar 17 18:17 boinc_task_state.xml
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas      1047 Mar 17 18:19 memory_monitor_summary.json
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas        96 Mar 17 18:19 pilot_heartbeat.json
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas   1511579 Mar 17 18:19 agis_ddmendpoints.agis.ALL.json
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas   1438095 Mar 17 18:19 log.49176178._000021.job.log.tgz.1
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas      6385 Mar 17 18:19 heartbeat.json
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas        29 Mar 17 18:19 wrapper_checkpoint.txt
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas      5006 Mar 17 18:19 pilotlog.txt
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas      8192 Mar 17 18:19 boinc_mmap_file
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas  10893455 Mar 17 18:19 log.49176178._000021.job.log.1
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas       357 Mar 17 18:19 output.list
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas       620 Mar 17 18:19 runtime_log
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas  12349440 Mar 17 18:19 result.tar.gz
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas      9424 Mar 17 18:19 runtime_log.err
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas       783 Mar 17 18:19 PB8LDmxeMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6CwLDm4CsX9n.diag
[2026-03-17 18:19:56] -rw-r--r--. 1 boincer umatlas     23327 Mar 17 18:19 stderr.txt
[2026-03-17 18:19:56] HITS file was successfully produced:
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas 237727501 Mar 17 18:17 shared/HITS.pool.root.1
[2026-03-17 18:19:56]  *** Contents of shared directory: ***
[2026-03-17 18:19:56] total 482636
[2026-03-17 18:19:56] -rw-r--r--. 3 boincer umatlas 243520253 Mar 16 09:29 ATLAS.root_0
[2026-03-17 18:19:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 09:29 start_atlas.sh
[2026-03-17 18:19:56] -rw-r--r--. 2 boincer umatlas    597532 Mar 16 09:29 input.tar.gz
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas 237727501 Mar 17 18:17 HITS.pool.root.1
[2026-03-17 18:19:56] -rw-------. 1 boincer umatlas  12349440 Mar 17 18:19 result.tar.gz
18:19:58 (3491689): run_atlas exited; CPU time 149917.789733
18:19:58 (3491689): called boinc_finish(0)

</stderr_txt>
]]>

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