Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:37:45 (3785226): wrapper (7.7.26015): starting
23:37:45 (3785226): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 23:37:45] Arguments: --nthreads 4
[2026-03-16 23:37:45] Threads: 4
[2026-03-16 23:37:45] Checking for CVMFS
[2026-03-16 23:37:45] No cvmfs_config command found, will try listing directly
[2026-03-16 23:37:45] CVMFS is ok
[2026-03-16 23:37:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 23:37:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 23:37:45] Further information can be found at the LHC@home message board.
[2026-03-16 23:37:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 23:37:45] Checking for apptainer binary...
[2026-03-16 23:37:45] which: no apptainer in ((null))
[2026-03-16 23:37:45] apptainer is not installed, using version from CVMFS
[2026-03-16 23:37:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 23:37:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-16 23:37:46] apptainer works
[2026-03-16 23:37:46] Set ATHENA_PROC_NUMBER=4
[2026-03-16 23:37:46] Set ATHENA_CORE_NUMBER=4
[2026-03-16 23:37:46] Starting ATLAS job with PandaID=7056888373
[2026-03-16 23:37:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 03:51:13]  *** The last 200 lines of the pilot log: ***
[2026-03-17 03:51:13] 2026-03-17 02:47:52,229 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 03:51:13] 2026-03-17 02:47:52,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 03:51:13] 2026-03-17 02:47:52,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 03:51:13] 2026-03-17 02:47:52,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 03:51:13] 2026-03-17 02:47:52,232 | INFO     | fitting pss+swap vs Time
[2026-03-17 03:51:13] 2026-03-17 02:47:52,232 | INFO     | sum of square deviations: 4616114457.5
[2026-03-17 03:51:13] 2026-03-17 02:47:52,233 | INFO     | sum of deviations: 20768201916.5
[2026-03-17 03:51:13] 2026-03-17 02:47:52,233 | INFO     | mean x: 1773708177.5
[2026-03-17 03:51:13] 2026-03-17 02:47:52,233 | INFO     | mean y: 2322585.361788618
[2026-03-17 03:51:13] 2026-03-17 02:47:52,233 | INFO     | intersect: -7977706920.062844
[2026-03-17 03:51:13] 2026-03-17 02:47:52,233 | INFO     | chi2: 1.925461683824735
[2026-03-17 03:51:13] 2026-03-17 02:47:52,233 | INFO     | sum of square deviations: 4340323240.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,234 | INFO     | sum of deviations: 35955636748.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,234 | INFO     | mean x: 1773708025.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,234 | INFO     | mean y: 2330842.128630705
[2026-03-17 03:51:13] 2026-03-17 02:47:52,234 | INFO     | intersect: -14691229502.90975
[2026-03-17 03:51:13] 2026-03-17 02:47:52,234 | INFO     | chi2: 1.1182657195306454
[2026-03-17 03:51:13] 2026-03-17 02:47:52,235 | INFO     | current chi2=1.1182657195306454 (change=41.92220344217271 %)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,235 | INFO     | sum of square deviations: 4075741535.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | sum of deviations: 35378521970.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | mean x: 1773707872.5
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | mean y: 2330509.4322033897
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | intersect: -15393926195.44818
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | chi2: 1.118080496021244
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | current chi2=1.118080496021244 (change=0.016563461274575458 %)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | right removable region: 235
[2026-03-17 03:51:13] 2026-03-17 02:47:52,236 | INFO     | sum of square deviations: 4340323240.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,237 | INFO     | sum of deviations: -6104005564.999998
[2026-03-17 03:51:13] 2026-03-17 02:47:52,237 | INFO     | mean x: 1773708330.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,237 | INFO     | mean y: 2337288.182572614
[2026-03-17 03:51:13] 2026-03-17 02:47:52,237 | INFO     | intersect: 2496788719.1794157
[2026-03-17 03:51:13] 2026-03-17 02:47:52,237 | INFO     | chi2: 0.825673003998664
[2026-03-17 03:51:13] 2026-03-17 02:47:52,237 | INFO     | current chi2=0.825673003998664 (change=57.11818048965025 %)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,237 | INFO     | sum of square deviations: 4075741535.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,238 | INFO     | sum of deviations: -8297972373.999999
[2026-03-17 03:51:13] 2026-03-17 02:47:52,238 | INFO     | mean x: 1773708482.5
[2026-03-17 03:51:13] 2026-03-17 02:47:52,238 | INFO     | mean y: 2338550.4491525423
[2026-03-17 03:51:13] 2026-03-17 02:47:52,238 | INFO     | intersect: 3613505711.3016276
[2026-03-17 03:51:13] 2026-03-17 02:47:52,239 | INFO     | chi2: 0.8228362823037497
[2026-03-17 03:51:13] 2026-03-17 02:47:52,239 | INFO     | current chi2=0.8228362823037497 (change=0.34356478668628165 %)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,239 | INFO     | left removable region: 20
[2026-03-17 03:51:13] 2026-03-17 02:47:52,239 | INFO     | sum of square deviations: 3081657780.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | sum of deviations: 4486849693.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | mean x: 1773708452.0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | mean y: 2349154.353488372
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | intersect: -2580145006.7365546
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | chi2: 0.0010208224960955442
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | current memory leak: 1.46 B/s (using 215 data points, chi2=0.00)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | could have reported an average CPU frequency of 3552 MHz (12 samples)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | ..............................
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . Timing measurements:
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . get job = 0 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . initial setup = 6 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . payload setup = 5 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . stage-in = 0 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . payload execution = 14967 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . stage-out = 0 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | . log creation = 0 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,240 | INFO     | ..............................
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | 
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | job summary report
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | --------------------------------------------------
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | PanDA job id: 7056888373
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | task id: 49176159
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | errors: (none)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | pilot state: finished 
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | transexitcode: 0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | exeerrorcode: 0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | exeerrordiag: 
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | exitcode: 0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | exitmsg: OK
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | cpuconsumptiontime: 57935 s
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | nevents: 400
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | neventsw: 0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | pid: 3796129
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | pgrp: 3796129
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | corecount: 4
[2026-03-17 03:51:13] 2026-03-17 02:47:52,288 | INFO     | event service: False
[2026-03-17 03:51:13] 2026-03-17 02:47:52,289 | INFO     | sizes: {0: 2280312, 11: 2280312, 14976: 2311246, 14977: 2320268, 14978: 2320518}
[2026-03-17 03:51:13] 2026-03-17 02:47:52,289 | INFO     | --------------------------------------------------
[2026-03-17 03:51:13] 2026-03-17 02:47:52,289 | INFO     | 
[2026-03-17 03:51:13] 2026-03-17 02:47:52,289 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/0
[2026-03-17 03:51:13] 2026-03-17 02:47:52,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,304 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,304 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,304 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | job 7056888373 has completed (purged errors)
[2026-03-17 03:51:13] 2026-03-17 02:47:52,305 | INFO     | overall cleanup function is called
[2026-03-17 03:51:13] 2026-03-17 02:47:53,312 | INFO     | --- collectZombieJob: --- 10, [3796129]
[2026-03-17 03:51:13] 2026-03-17 02:47:53,312 | INFO     | zombie collector waiting for pid 3796129
[2026-03-17 03:51:13] 2026-03-17 02:47:53,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 03:51:13] 2026-03-17 02:47:53,312 | INFO     | collected zombie processes
[2026-03-17 03:51:13] 2026-03-17 02:47:53,312 | INFO     | will attempt to kill all subprocesses of pid=3796129
[2026-03-17 03:51:13] 2026-03-17 02:47:53,805 | INFO     | process IDs to be killed: [3796129] (in reverse order)
[2026-03-17 03:51:13] 2026-03-17 02:47:54,035 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 03:51:13] 2026-03-17 02:47:54,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 03:51:13] 2026-03-17 02:47:54,065 | INFO     | did not find any defunct processes belonging to 3796129
[2026-03-17 03:51:13] 2026-03-17 02:47:54,097 | INFO     | did not find any defunct processes belonging to 3796129
[2026-03-17 03:51:13] 2026-03-17 02:47:54,097 | INFO     | ready for new job
[2026-03-17 03:51:13] 2026-03-17 02:47:54,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 03:51:13] 2026-03-17 02:47:54,098 | INFO     | **************************************
[2026-03-17 03:51:13] 2026-03-17 02:47:54,099 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 03:51:13] 2026-03-17 02:47:54,099 | INFO     | **************************************
[2026-03-17 03:51:13] 2026-03-17 02:47:54,099 | INFO     | 
[2026-03-17 03:51:13] 2026-03-17 02:47:54,104 | INFO     | architecture information:
[2026-03-17 03:51:13] 2026-03-17 02:47:54,105 | INFO     | executing command: cat /etc/os-release
[2026-03-17 03:51:13] 2026-03-17 02:47:54,121 | INFO     | cat /etc/os-release:
[2026-03-17 03:51:13] NAME="CentOS Linux"
[2026-03-17 03:51:13] VERSION="7 (Core)"
[2026-03-17 03:51:13] ID="centos"
[2026-03-17 03:51:13] ID_LIKE="rhel fedora"
[2026-03-17 03:51:13] VERSION_ID="7"
[2026-03-17 03:51:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 03:51:13] ANSI_COLOR="0;31"
[2026-03-17 03:51:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 03:51:13] HOME_URL="https://www.centos.org/"
[2026-03-17 03:51:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 03:51:13] 
[2026-03-17 03:51:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 03:51:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 03:51:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 03:51:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 03:51:13] 
[2026-03-17 03:51:13] 2026-03-17 02:47:54,121 | INFO     | **************************************
[2026-03-17 03:51:13] 2026-03-17 02:47:54,627 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/0
[2026-03-17 03:51:13] 2026-03-17 02:47:54,651 | INFO     | sufficient remaining disk space (20772290560 B)
[2026-03-17 03:51:13] 2026-03-17 02:47:54,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 03:51:13] 2026-03-17 02:47:54,652 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 03:51:13] 2026-03-17 02:47:54,652 | INFO     | update_server=False
[2026-03-17 03:51:13] 2026-03-17 02:47:54,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 03:51:13] 2026-03-17 02:47:54,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 03:51:13] 2026-03-17 02:47:54,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 03:51:13] 2026-03-17 02:47:55,047 | INFO     | all job control threads have been joined
[2026-03-17 03:51:13] 2026-03-17 02:47:55,181 | INFO     | all payload control threads have been joined
[2026-03-17 03:51:13] 2026-03-17 02:47:55,398 | INFO     | job.realtimelogging is not enabled
[2026-03-17 03:51:13] 2026-03-17 02:47:55,629 | INFO     | all data control threads have been joined
[2026-03-17 03:51:13] 2026-03-17 02:47:55,658 | INFO     | [job] retrieve thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,011 | INFO     | [payload] validate_post thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,052 | INFO     | [job] control thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,195 | INFO     | [payload] control thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,402 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,535 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,535 | INFO     | [data] copytool_in thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,542 | INFO     | [payload] failed_post thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,637 | INFO     | [data] control thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,659 | INFO     | [data] copytool_out thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:56,758 | WARNING  | process 3796129 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 03:51:13] 2026-03-17 02:47:56,898 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:57,107 | INFO     | using path: /var/lib/boinc/var/slot156/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 03:51:13] 2026-03-17 02:47:57,150 | INFO     | [job] validate thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:57,153 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:57,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 03:51:13] 2026-03-17 02:47:57,558 | INFO     | number of running child processes to parent process 3796129: 1
[2026-03-17 03:51:13] 2026-03-17 02:47:57,559 | INFO     | maximum number of monitored processes: 6
[2026-03-17 03:51:13] 2026-03-17 02:47:57,559 | INFO     | aborting job monitoring since job object (job id=7056888373) has expired
[2026-03-17 03:51:13] 2026-03-17 02:47:57,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 03:51:13] 2026-03-17 02:47:57,559 | INFO     | will abort loop
[2026-03-17 03:51:13] 2026-03-17 02:47:58,307 | INFO     | [job] queue monitor thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:58,567 | INFO     | [job] job monitor thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:47:58,658 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 03:51:13] 2026-03-17 02:48:25,075 | INFO     | PID=3790127 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 03:51:13] 2026-03-17 02:48:25,076 | INFO     | .. there are 45 such processes running
[2026-03-17 03:51:13] 2026-03-17 02:48:25,076 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 03:51:13] 2026-03-17 02:48:25,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 03:51:13] 2026-03-17 02:48:25,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 03:51:13] 2026-03-17 02:48:27,364 | INFO     | [monitor] cgroup control has ended
[2026-03-17 03:51:13] 2026-03-17 02:48:29,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22673715582784)>', '<ExcThread(monitor, started 22673400788736)>']
[2026-03-17 03:51:13] 2026-03-17 02:48:30,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 03:51:13] 2026-03-17 02:48:30,103 | INFO     | [monitor] control thread has ended
[2026-03-17 03:51:13] 2026-03-17 02:48:34,358 | INFO     | all workflow threads have been joined
[2026-03-17 03:51:13] 2026-03-17 02:48:34,358 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 03:51:13] 2026-03-17 02:48:34,358 | INFO     | traces error code: 0
[2026-03-17 03:51:13] 2026-03-17 02:48:34,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 03:51:13] 2026-03-17 02:48:34,476 [wrapper] ==== pilot stdout END ====
[2026-03-17 03:51:13] 2026-03-17 02:48:34,477 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 03:51:13] 2026-03-17 02:48:34,479 [wrapper] pilotpid: 3790127
[2026-03-17 03:51:13] 2026-03-17 02:48:34,481 [wrapper] Pilot exit status: 0
[2026-03-17 03:51:13] 2026-03-17 02:48:34,488 [wrapper] pandaids: 7056888373
[2026-03-17 03:51:13] 2026-03-17 02:48:34,633 [wrapper] cleanup supervisor_pilot  543097 3790128
[2026-03-17 03:51:13] 2026-03-17 02:48:34,635 [wrapper] Test setup, not cleaning
[2026-03-17 03:51:13] 2026-03-17 02:48:34,636 [wrapper] apfmon messages muted
[2026-03-17 03:51:13] 2026-03-17 02:48:34,638 [wrapper] ==== wrapper stdout END ====
[2026-03-17 03:51:13] 2026-03-17 02:48:34,639 [wrapper] ==== wrapper stderr END ====
[2026-03-17 03:51:13]  *** Error codes and diagnostics ***
[2026-03-17 03:51:13]     "exeErrorCode": 0,
[2026-03-17 03:51:13]     "exeErrorDiag": "",
[2026-03-17 03:51:13]     "pilotErrorCode": 0,
[2026-03-17 03:51:13]     "pilotErrorDiag": "",
[2026-03-17 03:51:13]  *** Listing of results directory ***
[2026-03-17 03:51:13] total 489908
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc    585013 Mar 16 13:24 pilot3.tar.gz
[2026-03-17 03:51:13] -rwx------. 1 boinc boinc     36322 Mar 16 13:55 runpilot2-wrapper.sh
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc      5111 Mar 16 13:58 queuedata.json
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc       100 Mar 16 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 03:51:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 23:37 run_atlas
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc       105 Mar 16 23:37 job.xml
[2026-03-17 03:51:13] -rw-r--r--. 2 boinc boinc 244385683 Mar 16 23:37 EVNT.49132792._000002.pool.root.1
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc      6709 Mar 16 23:37 init_data.xml
[2026-03-17 03:51:13] -rw-r--r--. 2 boinc boinc     15845 Mar 16 23:37 start_atlas.sh
[2026-03-17 03:51:13] drwxrwx--x. 2 boinc boinc      4096 Mar 16 23:37 shared
[2026-03-17 03:51:13] -rw-r--r--. 2 boinc boinc    597540 Mar 16 23:37 input.tar.gz
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc         0 Mar 16 23:37 boinc_lockfile
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc      2613 Mar 16 23:37 pandaJob.out
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc   1006429 Mar 16 23:37 agis_schedconf.cvmfs.json
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc       443 Mar 16 23:38 workernode_map.json
[2026-03-17 03:51:13] drwx------. 5 boinc boinc      4096 Mar 16 23:38 pilot3
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc 248299661 Mar 17 03:47 HITS.49176159._000043.pool.root.1
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc       530 Mar 17 03:47 boinc_task_state.xml
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc        95 Mar 17 03:47 pilot_heartbeat.json
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc      1031 Mar 17 03:47 memory_monitor_summary.json
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc   1511579 Mar 17 03:47 agis_ddmendpoints.agis.ALL.json
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc    419858 Mar 17 03:47 log.49176159._000043.job.log.tgz.1
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc      6347 Mar 17 03:47 heartbeat.json
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc      5435 Mar 17 03:48 pilotlog.txt
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc   2098870 Mar 17 03:48 log.49176159._000043.job.log.1
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc       357 Mar 17 03:48 output.list
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc       620 Mar 17 03:48 runtime_log
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc   2539520 Mar 17 03:48 result.tar.gz
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc      9222 Mar 17 03:48 runtime_log.err
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc       665 Mar 17 03:48 LuhKDmneMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGBwLDm9lJqEn.diag
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc        28 Mar 17 03:51 wrapper_checkpoint.txt
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc      8192 Mar 17 03:51 boinc_mmap_file
[2026-03-17 03:51:13] -rw-r--r--. 1 boinc boinc     20831 Mar 17 03:51 stderr.txt
[2026-03-17 03:51:13] HITS file was successfully produced:
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc 248299661 Mar 17 03:47 shared/HITS.pool.root.1
[2026-03-17 03:51:13]  *** Contents of shared directory: ***
[2026-03-17 03:51:13] total 484232
[2026-03-17 03:51:13] -rw-r--r--. 2 boinc boinc 244385683 Mar 16 23:37 ATLAS.root_0
[2026-03-17 03:51:13] -rw-r--r--. 2 boinc boinc     15845 Mar 16 23:37 start_atlas.sh
[2026-03-17 03:51:13] -rw-r--r--. 2 boinc boinc    597540 Mar 16 23:37 input.tar.gz
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc 248299661 Mar 17 03:47 HITS.pool.root.1
[2026-03-17 03:51:13] -rw-------. 1 boinc boinc   2539520 Mar 17 03:48 result.tar.gz
03:51:14 (3785226): run_atlas exited; CPU time 58665.158467
03:51:14 (3785226): called boinc_finish(0)

</stderr_txt>
]]>

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