Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-16 12:36:46 (14384): vboxwrapper version 26210
2026-03-16 12:36:46 (14384): BOINC client version: 8.0.2
2026-03-16 12:36:46 (14384): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2026-03-16 12:36:47 (14384): Successfully copied 'init_data.xml' to the shared directory.
2026-03-16 12:36:47 (14384): Create VM. (boinc_ce159fa80e101853, slot#8)
2026-03-16 12:36:47 (14384): Setting Memory Size for VM. (4700MB)
2026-03-16 12:36:48 (14384): Setting CPU Count for VM. (7)
2026-03-16 12:36:48 (14384): Setting Chipset Options for VM.
2026-03-16 12:36:48 (14384): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-16 12:36:48 (14384): Setting Boot Options for VM.
2026-03-16 12:36:49 (14384): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-16 12:36:49 (14384): Enabling VM Network Access.
2026-03-16 12:36:49 (14384): Disabling USB Support for VM.
2026-03-16 12:36:50 (14384): Disabling COM Port Support for VM.
2026-03-16 12:36:50 (14384): Disabling LPT Port Support for VM.
2026-03-16 12:36:50 (14384): Disabling Audio Support for VM.
2026-03-16 12:36:50 (14384): Disabling Clipboard Support for VM.
2026-03-16 12:36:51 (14384): Disabling Drag and Drop Support for VM.
2026-03-16 12:36:51 (14384): Adding storage controller(s) to VM.
2026-03-16 12:36:51 (14384): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-16 12:36:52 (14384): Adding VirtualBox Guest Additions to VM.
2026-03-16 12:36:52 (14384): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-16 12:36:52 (14384): forwarding host port 65133 to guest port 80
2026-03-16 12:36:53 (14384): Enabling remote desktop for VM.
2026-03-16 12:36:53 (14384): Required extension pack not installed, remote desktop not enabled.
2026-03-16 12:36:53 (14384): Enabling shared directory for VM.
2026-03-16 12:36:53 (14384): Starting VM using VBoxManage interface. (boinc_ce159fa80e101853, slot#8)
2026-03-16 12:36:57 (14384): Successfully started VM. (PID = '17584')
2026-03-16 12:36:57 (14384): Reporting VM Process ID to BOINC.
2026-03-16 12:36:57 (14384): Guest Log: BIOS: VirtualBox 6.1.50
2026-03-16 12:36:57 (14384): Guest Log: CPUID EDX: 0x178bfbff
2026-03-16 12:36:57 (14384): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-16 12:36:57 (14384): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-16 12:36:57 (14384): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-16 12:36:57 (14384): Detected: Web Application Enabled (http://localhost:65133)
2026-03-16 12:36:57 (14384): Preference change detected
2026-03-16 12:36:57 (14384): Setting CPU throttle for VM. (100%)
2026-03-16 12:36:57 (14384): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-16 12:36:59 (14384): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-16 12:36:59 (14384): Guest Log: BIOS: Booting from Hard Disk...
2026-03-16 12:37:02 (14384): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-16 12:37:02 (14384): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-16 12:37:02 (14384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-16 12:37:07 (14384): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-16 12:37:07 (14384): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-16 12:37:13 (14384): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000136 main     Log opened 2026-03-16T12:37:12.050762000Z
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000201 main     OS Product: Linux
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000219 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000235 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000260 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000261 main     Process ID: 1351
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000261 main     Package type: LINUX_64BITS_GENERIC
2026-03-16 12:37:13 (14384): Guest Log: 00:00:00.000789 main     5.2.32 r132073 started. Verbose level = 0
2026-03-16 12:37:13 (14384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-16 12:37:13 (14384): Guest Log: [INFO] Mounting shared directory
2026-03-16 12:37:13 (14384): Guest Log: [INFO] Checking for init_data.xml
2026-03-16 12:37:16 (14384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-16 12:37:16 (14384): Guest Log: [INFO] Detected branch: prod
2026-03-16 12:37:17 (14384): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-16 12:37:17 (14384): Guest Log: Copying input files
2026-03-16 12:37:18 (14384): Guest Log: Copied input files into RunAtlas.
2026-03-16 12:37:18 (14384): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-16 12:37:18 (14384): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-16 12:37:18 (14384): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-16 12:37:18 (14384): Guest Log: Further information can be found at the LHC@home message board.
2026-03-16 12:37:22 (14384): Guest Log: 00:00:10.006158 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 239 245 000ns (GuestNow=1 773 661 042 814 742 000 ns GuestLast=1 773 664 632 053 987 000 ns fSetTimeLastLoop=true )
2026-03-16 12:37:26 (14384): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-16 12:37:26 (14384): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-16 12:37:26 (14384): Guest Log: 2.6.3.0 1627 0 30192 157351 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-16 12:37:27 (14384): Guest Log: copied the webapp to /var/www
2026-03-16 12:37:27 (14384): Guest Log: ATHENA_PROC_NUMBER=7
2026-03-16 12:37:27 (14384): Guest Log: ATHENA_CORE_NUMBER=7
2026-03-16 12:37:27 (14384): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-16 12:37:27 (14384): Guest Log:  *** Starting ATLAS job. (PandaID=7053292838 taskID=48967085) ***
2026-03-16 14:16:59 (14384): Status Report: Elapsed Time: '6000.000000'
2026-03-16 14:16:59 (14384): Status Report: CPU Time: '38332.109375'
2026-03-16 14:17:34 (14384): Guest Log:  *** Job finished ***
2026-03-16 14:17:34 (14384): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:26:51,051 | INFO     | [data] copytool_out thread has finished
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:26:53,988 | INFO     | [data] queue_monitor thread has finished
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:15,158 | INFO     | [monitor] cgroup control has ended
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:15,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359182649152)>', '<ExcThread(monitor, started 140358298093312)>']
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:16,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:16,646 | INFO     | [monitor] control thread has ended
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,788 | INFO     | all workflow threads have been joined
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,788 | INFO     | end of generic workflow (traces error code: 0)
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,788 | INFO     | traces error code: 0
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,878 [wrapper] ==== pilot stdout END ====
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,882 [wrapper] ==== wrapper stdout RESUME ====
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,887 [wrapper] pilotpid: 6037
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:20,891 [wrapper] Pilot exit status: 0
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:21,090 [wrapper] pandaids: 7053292838
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:21,121 [wrapper] cleanup supervisor_pilot 25852 6038
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:21,126 [wrapper] Test setup, not cleaning
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:21,130 [wrapper] apfmon messages muted
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:21,135 [wrapper] ==== wrapper stdout END ====
2026-03-16 14:17:34 (14384): Guest Log: 2026-03-16 13:27:21,139 [wrapper] ==== wrapper stderr END ====
2026-03-16 14:17:34 (14384): Guest Log:  *** Error codes and diagnostics ***
2026-03-16 14:17:34 (14384): Guest Log:     "exeErrorCode": 0,
2026-03-16 14:17:34 (14384): Guest Log:     "exeErrorDiag": "",
2026-03-16 14:17:34 (14384): Guest Log:     "pilotErrorCode": 0,
2026-03-16 14:17:34 (14384): Guest Log:     "pilotErrorDiag": "",
2026-03-16 14:17:34 (14384): Guest Log:  *** Listing of results directory ***
2026-03-16 14:17:34 (14384): Guest Log: total 198696
2026-03-16 14:17:34 (14384): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 13 11:56 queuedata.json
2026-03-16 14:17:34 (14384): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 13 11:56 pilot3.tar.gz
2026-03-16 14:17:34 (14384): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 13 11:56 runpilot2-wrapper.sh
2026-03-16 14:17:34 (14384): Guest Log: -rwxr-xr-x. 1 atlas atlas    597524 Mar 16 11:37 input.tar.gz
2026-03-16 14:17:34 (14384): Guest Log: -rwxr-xr-x. 1 atlas atlas      9129 Mar 16 11:37 init_data.xml
2026-03-16 14:17:34 (14384): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 16 11:37 start_atlas.sh
2026-03-16 14:17:34 (14384): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 16 11:37 EVNT.48967083._000836.pool.root.1 -> /data/./ATLAS.root_0
2026-03-16 14:17:34 (14384): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar 16 11:37 pandaJob.out
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas   1006429 Mar 16 11:38 agis_schedconf.cvmfs.json
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 16 11:38 agis_ddmendpoints.agis.ALL.json
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas       422 Mar 16 11:38 workernode_map.json
2026-03-16 14:17:34 (14384): Guest Log: drwx------. 5 atlas atlas      4096 Mar 16 11:38 pilot3
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas        95 Mar 16 13:26 pilot_heartbeat.json
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas 197073125 Mar 16 13:26 HITS.48967085._020373.pool.root.1
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas      1026 Mar 16 13:26 memory_monitor_summary.json
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas    338204 Mar 16 13:26 log.48967085._020373.job.log.tgz.1
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas      6337 Mar 16 13:26 heartbeat.json
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas      4608 Mar 16 13:27 pilotlog.txt
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas    922544 Mar 16 13:27 log.48967085._020373.job.log.1
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas       357 Mar 16 13:27 output.list
2026-03-16 14:17:34 (14384): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 16 13:27 runtime_log
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas   1280000 Mar 16 13:27 result.tar.gz
2026-03-16 14:17:34 (14384): Guest Log: -rw-r--r--. 1 atlas atlas      8742 Mar 16 13:27 runtime_log.err
2026-03-16 14:17:34 (14384): Guest Log: -rw-------. 1 atlas atlas       650 Mar 16 13:27 GK3MDmwIGL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpJpLDmkNQ6Mm.diag
2026-03-16 14:17:35 (14384): Guest Log: Looking for outputfile HITS.48967085._020373.pool.root.1
2026-03-16 14:17:35 (14384): Guest Log: HITS file was successfully produced
2026-03-16 14:17:35 (14384): Guest Log: -rw-------. 1 atlas atlas 197073125 Mar 16 13:26 /home/atlas/RunAtlas/HITS.48967085._020373.pool.root.1
2026-03-16 14:17:35 (14384): Guest Log: Successfully finished the ATLAS job!
2026-03-16 14:17:35 (14384): Guest Log: Copying the results back to the shared directory!
2026-03-16 14:17:35 (14384): Guest Log:  *** Contents of shared directory: ***
2026-03-16 14:17:35 (14384): Guest Log: total 401240
2026-03-16 14:17:35 (14384): Guest Log: -rwxrwxrwx. 1 root root 211884186 Mar 16 11:36 ATLAS.root_0
2026-03-16 14:17:35 (14384): Guest Log: -rwxrwxrwx. 1 root root 197073125 Mar 16 13:17 HITS.pool.root.1
2026-03-16 14:17:35 (14384): Guest Log: -rwxrwxrwx. 1 root root      9129 Mar 16 11:36 init_data.xml
2026-03-16 14:17:35 (14384): Guest Log: -rwxrwxrwx. 1 root root    597524 Mar 16 10:33 input.tar.gz
2026-03-16 14:17:35 (14384): Guest Log: -rwxrwxrwx. 1 root root   1280000 Mar 16 13:17 result.tar.gz
2026-03-16 14:17:35 (14384): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 16 10:33 start_atlas.sh
2026-03-16 14:17:35 (14384): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-16 14:17:35 (14384): VM Completion File Detected.
2026-03-16 14:17:35 (14384): Powering off VM.
2026-03-16 14:17:36 (14384): Successfully stopped VM.
2026-03-16 14:17:36 (14384): Deregistering VM. (boinc_ce159fa80e101853, slot#8)
2026-03-16 14:17:37 (14384): Removing network bandwidth throttle group from VM.
2026-03-16 14:17:37 (14384): Removing VM from VirtualBox.
2026-03-16 14:17:42 (14384): called boinc_finish(0)

</stderr_txt>
]]>

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