Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:27:55 (556424): wrapper (7.7.26015): starting
05:27:55 (556424): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 05:27:55] Arguments: --nthreads 8
[2026-03-16 05:27:55] Threads: 8
[2026-03-16 05:27:55] Checking for CVMFS
[2026-03-16 05:27:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 05:27:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 05:27:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 05:27:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 05:27:56] 2.13.3.0 6005 116361 159768 157347 2 58 37418446 39288833 109 16776704 0 68210461 99.610 77170285 36716 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 05:27:56] CVMFS is ok
[2026-03-16 05:27:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 05:27:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 05:27:56] Further information can be found at the LHC@home message board.
[2026-03-16 05:27:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 05:27:56] Checking for apptainer binary...
[2026-03-16 05:27:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 05:27:56] Running /usr/bin/apptainer --version
[2026-03-16 05:27:56] apptainer version 1.4.5-2.el9
[2026-03-16 05:27:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 05:27:56] c-210-18.aglt2.org
[2026-03-16 05:27:56] apptainer works
[2026-03-16 05:27:56] Set ATHENA_PROC_NUMBER=8
[2026-03-16 05:27:56] Set ATHENA_CORE_NUMBER=8
[2026-03-16 05:27:56] Starting ATLAS job with PandaID=7045870932
[2026-03-16 05:27:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 06:54:18]  *** The last 200 lines of the pilot log: ***
[2026-03-16 06:54:18]  is_tar=False
[2026-03-16 06:54:18]  lfn=log.48997926._001877.job.log.tgz.1
[2026-03-16 06:54:18]  mtime=0
[2026-03-16 06:54:18]  protocol_id=None
[2026-03-16 06:54:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 06:54:18]  replicas=None
[2026-03-16 06:54:18]  scope=mc23_13p6TeV
[2026-03-16 06:54:18]  status=None
[2026-03-16 06:54:18]  status_code=0
[2026-03-16 06:54:18]  storage_token=
[2026-03-16 06:54:18]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7045870932/log.48997926._001877.job.log.tgz.1
[2026-03-16 06:54:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/0c/log.48997926._001877.job.log.tgz.1
[2026-03-16 06:54:18]  workdir=None
[2026-03-16 06:54:18] ]
[2026-03-16 06:54:18] 2026-03-16 10:53:37,539 | INFO     | transferring file log.48997926._001877.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7045870932/log.48997926._001877.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-16 06:54:18] 2026-03-16 10:53:37,540 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7045870932/log.48997926._001877.job.log.tgz.1 /tmp/boinchome/slots/1/log.48997926._001877.job
[2026-03-16 06:54:18] 2026-03-16 10:53:37,556 | INFO     | adding to output.list: log.48997926._001877.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/0c/log.48997926._001877.job.log.tg
[2026-03-16 06:54:18] 2026-03-16 10:53:37,557 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 06:54:18] 2026-03-16 10:53:37,558 | INFO     | summary of transferred files:
[2026-03-16 06:54:18] 2026-03-16 10:53:37,558 | INFO     |  -- lfn=log.48997926._001877.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 06:54:18] 2026-03-16 10:53:37,558 | INFO     | stage-out finished correctly
[2026-03-16 06:54:18] 2026-03-16 10:53:38,679 | INFO     | time since job start (5133s) is within the limit (349056.0s)
[2026-03-16 06:54:18] 2026-03-16 10:53:40,122 | INFO     | PID=561777 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 06:54:18] 2026-03-16 10:53:40,123 | INFO     | .. there are 6 such processes running
[2026-03-16 06:54:18] 2026-03-16 10:53:40,211 | WARNING  | process 573215 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 06:54:18] 2026-03-16 10:53:40,212 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7045870932/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 06:54:18] 2026-03-16 10:53:40,307 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 06:54:18] 2026-03-16 10:53:40,550 | INFO     | number of running child processes to parent process 573215: 1
[2026-03-16 06:54:18] 2026-03-16 10:53:40,551 | INFO     | maximum number of monitored processes: 6
[2026-03-16 06:54:18] 2026-03-16 10:53:41,123 | INFO     | time since job start (5136s) is within the limit (349056.0s)
[2026-03-16 06:54:18] 2026-03-16 10:53:41,973 | INFO     | job 7045870932 has state=finished
[2026-03-16 06:54:18] 2026-03-16 10:53:41,974 | INFO     | preparing for final server update for job 7045870932 in state='finished'
[2026-03-16 06:54:18] 2026-03-16 10:53:41,974 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7045870932/jobReport.json
[2026-03-16 06:54:18] 2026-03-16 10:53:41,978 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-16 06:54:18] 2026-03-16 10:53:41,979 | INFO     | this job has now completed (state=finished)
[2026-03-16 06:54:18] 2026-03-16 10:53:41,979 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 06:54:18] 2026-03-16 10:53:41,979 | INFO     | log transfer has been attempted: DONE
[2026-03-16 06:54:18] 2026-03-16 10:53:41,979 | INFO     | job 7045870932 has finished - writing final server update
[2026-03-16 06:54:18] 2026-03-16 10:53:41,979 | INFO     | total number of processed events: 400 (read)
[2026-03-16 06:54:18] 2026-03-16 10:53:41,987 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7045870932/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 06:54:18] 2026-03-16 10:53:41,988 | INFO     | extracted standard info from prmon json
[2026-03-16 06:54:18] 2026-03-16 10:53:41,988 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 06:54:18] 2026-03-16 10:53:41,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 06:54:18] 2026-03-16 10:53:41,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 06:54:18] 2026-03-16 10:53:41,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 06:54:18] 2026-03-16 10:53:41,991 | INFO     | fitting pss+swap vs Time
[2026-03-16 06:54:18] 2026-03-16 10:53:41,992 | INFO     | sum of square deviations: 141539398.0
[2026-03-16 06:54:18] 2026-03-16 10:53:41,992 | INFO     | sum of deviations: -7312539944.000001
[2026-03-16 06:54:18] 2026-03-16 10:53:41,992 | INFO     | mean x: 1773655925.0
[2026-03-16 06:54:18] 2026-03-16 10:53:41,992 | INFO     | mean y: 2708172.1948051946
[2026-03-16 06:54:18] 2026-03-16 10:53:41,993 | INFO     | intersect: 91637475464.866
[2026-03-16 06:54:18] 2026-03-16 10:53:41,993 | INFO     | chi2: 0.043812747180711924
[2026-03-16 06:54:18] 2026-03-16 10:53:41,993 | INFO     | current memory leak: -51.66 B/s (using 77 data points, chi2=0.04)
[2026-03-16 06:54:18] 2026-03-16 10:53:41,993 | INFO     | could have reported an average CPU frequency of 2767 MHz (6 samples)
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | ..............................
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | . Timing measurements:
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | . get job = 0 s
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | . initial setup = 4 s
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | . payload setup = 2 s
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | . stage-in = 0 s
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | . payload execution = 5113 s
[2026-03-16 06:54:18] 2026-03-16 10:53:41,994 | INFO     | . stage-out = 1 s
[2026-03-16 06:54:18] 2026-03-16 10:53:41,995 | INFO     | . log creation = 0 s
[2026-03-16 06:54:18] 2026-03-16 10:53:41,995 | INFO     | ..............................
[2026-03-16 06:54:18] 2026-03-16 10:53:42,248 | INFO     | 
[2026-03-16 06:54:18] 2026-03-16 10:53:42,248 | INFO     | job summary report
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | --------------------------------------------------
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | PanDA job id: 7045870932
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | task id: 48997926
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | errors: (none)
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | pilot state: finished 
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | transexitcode: 0
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | exeerrorcode: 0
[2026-03-16 06:54:18] 2026-03-16 10:53:42,249 | INFO     | exeerrordiag: 
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | exitcode: 0
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | exitmsg: OK
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | cpuconsumptiontime: 38584 s
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | nevents: 400
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | neventsw: 0
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | pid: 573215
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | pgrp: 573215
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | corecount: 8
[2026-03-16 06:54:18] 2026-03-16 10:53:42,250 | INFO     | event service: False
[2026-03-16 06:54:18] 2026-03-16 10:53:42,251 | INFO     | sizes: {0: 2279176, 1: 2280294, 11: 2280294, 5120: 2306737, 5122: 2315735, 5125: 2315791, 5126: 2316113}
[2026-03-16 06:54:18] 2026-03-16 10:53:42,251 | INFO     | --------------------------------------------------
[2026-03-16 06:54:18] 2026-03-16 10:53:42,251 | INFO     | 
[2026-03-16 06:54:18] 2026-03-16 10:53:42,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-16 06:54:18] 2026-03-16 10:53:42,275 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,276 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,279 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 06:54:18] 2026-03-16 10:53:42,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,279 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 06:54:18] 2026-03-16 10:53:42,279 | INFO     | job 7045870932 has completed (purged errors)
[2026-03-16 06:54:18] 2026-03-16 10:53:42,280 | INFO     | overall cleanup function is called
[2026-03-16 06:54:18] 2026-03-16 10:53:43,287 | INFO     | --- collectZombieJob: --- 10, [573215]
[2026-03-16 06:54:18] 2026-03-16 10:53:43,287 | INFO     | zombie collector waiting for pid 573215
[2026-03-16 06:54:18] 2026-03-16 10:53:43,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 06:54:18] 2026-03-16 10:53:43,288 | INFO     | collected zombie processes
[2026-03-16 06:54:18] 2026-03-16 10:53:43,288 | INFO     | will attempt to kill all subprocesses of pid=573215
[2026-03-16 06:54:18] 2026-03-16 10:53:43,511 | INFO     | process IDs to be killed: [573215] (in reverse order)
[2026-03-16 06:54:18] 2026-03-16 10:53:43,579 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 06:54:18] 2026-03-16 10:53:43,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 06:54:18] 2026-03-16 10:53:43,588 | INFO     | did not find any defunct processes belonging to 573215
[2026-03-16 06:54:18] 2026-03-16 10:53:43,595 | INFO     | did not find any defunct processes belonging to 573215
[2026-03-16 06:54:18] 2026-03-16 10:53:43,596 | INFO     | ready for new job
[2026-03-16 06:54:18] 2026-03-16 10:53:43,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 06:54:18] 2026-03-16 10:53:43,598 | INFO     | **************************************
[2026-03-16 06:54:18] 2026-03-16 10:53:43,599 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 06:54:18] 2026-03-16 10:53:43,599 | INFO     | **************************************
[2026-03-16 06:54:18] 2026-03-16 10:53:43,599 | INFO     | 
[2026-03-16 06:54:18] 2026-03-16 10:53:43,601 | INFO     | architecture information:
[2026-03-16 06:54:18] 2026-03-16 10:53:43,601 | INFO     | executing command: cat /etc/os-release
[2026-03-16 06:54:18] 2026-03-16 10:53:43,615 | INFO     | cat /etc/os-release:
[2026-03-16 06:54:18] NAME="CentOS Linux"
[2026-03-16 06:54:18] VERSION="7 (Core)"
[2026-03-16 06:54:18] ID="centos"
[2026-03-16 06:54:18] ID_LIKE="rhel fedora"
[2026-03-16 06:54:18] VERSION_ID="7"
[2026-03-16 06:54:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 06:54:18] ANSI_COLOR="0;31"
[2026-03-16 06:54:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 06:54:18] HOME_URL="https://www.centos.org/"
[2026-03-16 06:54:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 06:54:18] 
[2026-03-16 06:54:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 06:54:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 06:54:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 06:54:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 06:54:18] 
[2026-03-16 06:54:18] 2026-03-16 10:53:43,616 | INFO     | **************************************
[2026-03-16 06:54:18] 2026-03-16 10:53:44,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-16 06:54:18] 2026-03-16 10:53:44,134 | INFO     | sufficient remaining disk space (53492056064 B)
[2026-03-16 06:54:18] 2026-03-16 10:53:44,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 06:54:18] 2026-03-16 10:53:44,134 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 06:54:18] 2026-03-16 10:53:44,134 | INFO     | update_server=False
[2026-03-16 06:54:18] 2026-03-16 10:53:44,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 06:54:18] 2026-03-16 10:53:44,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 06:54:18] 2026-03-16 10:53:44,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 06:54:18] 2026-03-16 10:53:44,135 | INFO     | aborting loop
[2026-03-16 06:54:18] 2026-03-16 10:53:44,710 | INFO     | all job control threads have been joined
[2026-03-16 06:54:18] 2026-03-16 10:53:44,842 | INFO     | all payload control threads have been joined
[2026-03-16 06:54:18] 2026-03-16 10:53:44,880 | INFO     | all data control threads have been joined
[2026-03-16 06:54:18] 2026-03-16 10:53:45,139 | INFO     | [job] retrieve thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:45,140 | INFO     | [job] job monitor thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:45,487 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:45,716 | INFO     | [job] control thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:45,848 | INFO     | [payload] control thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:45,885 | INFO     | [data] control thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:46,089 | INFO     | [job] validate thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:46,140 | INFO     | [data] copytool_out thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:46,176 | INFO     | [payload] validate_post thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:46,209 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:46,383 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:46,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 06:54:18] 2026-03-16 10:53:46,525 | INFO     | [payload] failed_post thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:46,630 | INFO     | [data] copytool_in thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:47,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 06:54:18] 2026-03-16 10:53:48,117 | INFO     | [job] queue monitor thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:50,429 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:53:54,761 | INFO     | job.realtimelogging is not enabled
[2026-03-16 06:54:18] 2026-03-16 10:53:55,766 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 06:54:18] 2026-03-16 10:54:11,914 | INFO     | [monitor] cgroup control has ended
[2026-03-16 06:54:18] 2026-03-16 10:54:13,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744518240064)>', '<ExcThread(monitor, started 139744008730368)>']
[2026-03-16 06:54:18] 2026-03-16 10:54:14,462 | INFO     | PID=561777 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 06:54:18] 2026-03-16 10:54:14,463 | INFO     | .. there are 6 such processes running
[2026-03-16 06:54:18] 2026-03-16 10:54:14,464 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 06:54:18] 2026-03-16 10:54:14,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 06:54:18] 2026-03-16 10:54:14,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 06:54:18] 2026-03-16 10:54:14,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 06:54:18] 2026-03-16 10:54:14,465 | INFO     | [monitor] control thread has ended
[2026-03-16 06:54:18] 2026-03-16 10:54:18,311 | INFO     | all workflow threads have been joined
[2026-03-16 06:54:18] 2026-03-16 10:54:18,311 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 06:54:18] 2026-03-16 10:54:18,312 | INFO     | traces error code: 0
[2026-03-16 06:54:18] 2026-03-16 10:54:18,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 06:54:18] 2026-03-16 10:54:18,478 [wrapper] ==== pilot stdout END ====
[2026-03-16 06:54:18] 2026-03-16 10:54:18,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 06:54:18] 2026-03-16 10:54:18,483 [wrapper] pilotpid: 561777
[2026-03-16 06:54:18] 2026-03-16 10:54:18,486 [wrapper] Pilot exit status: 0
[2026-03-16 06:54:18] 2026-03-16 10:54:18,496 [wrapper] pandaids: 7045870932
[2026-03-16 06:54:18] 2026-03-16 10:54:18,543 [wrapper] cleanup supervisor_pilot  712781 561778
[2026-03-16 06:54:18] 2026-03-16 10:54:18,546 [wrapper] Test setup, not cleaning
[2026-03-16 06:54:18] 2026-03-16 10:54:18,549 [wrapper] apfmon messages muted
[2026-03-16 06:54:18] 2026-03-16 10:54:18,551 [wrapper] ==== wrapper stdout END ====
[2026-03-16 06:54:18] 2026-03-16 10:54:18,554 [wrapper] ==== wrapper stderr END ====
[2026-03-16 06:54:18]  *** Error codes and diagnostics ***
[2026-03-16 06:54:18]     "exeErrorCode": 0,
[2026-03-16 06:54:18]     "exeErrorDiag": "",
[2026-03-16 06:54:18]     "pilotErrorCode": 0,
[2026-03-16 06:54:18]     "pilotErrorDiag": "",
[2026-03-16 06:54:18]  *** Listing of results directory ***
[2026-03-16 06:54:18] total 601256
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas      5111 Mar  8 00:00 queuedata.json
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas    584627 Mar  8 00:00 pilot3.tar.gz
[2026-03-16 06:54:18] -rwx------. 1 boincer umatlas     36322 Mar  8 00:01 runpilot2-wrapper.sh
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas       100 Mar 16 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 06:54:18] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 16 05:27 run_atlas
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas       105 Mar 16 05:27 job.xml
[2026-03-16 06:54:18] -rw-r--r--. 2 boincer umatlas 341926465 Mar 16 05:27 EVNT.48997924._000075.pool.root.1
[2026-03-16 06:54:18] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 05:27 start_atlas.sh
[2026-03-16 06:54:18] drwxrwx--x. 2 boincer umatlas      4096 Mar 16 05:27 shared
[2026-03-16 06:54:18] -rw-r--r--. 2 boincer umatlas    597954 Mar 16 05:27 input.tar.gz
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas         0 Mar 16 05:27 boinc_lockfile
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas      2586 Mar 16 05:27 pandaJob.out
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas        57 Mar 16 05:27 setup.sh.local
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas   1006405 Mar 16 05:28 agis_schedconf.cvmfs.json
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas   1511579 Mar 16 05:28 agis_ddmendpoints.agis.ALL.json
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas       442 Mar 16 05:28 workernode_map.json
[2026-03-16 06:54:18] drwx------. 5 boincer umatlas      4096 Mar 16 05:28 pilot3
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas      6661 Mar 16 06:47 init_data.xml
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas       529 Mar 16 06:52 boinc_task_state.xml
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas 267628492 Mar 16 06:52 HITS.48997926._001877.pool.root.1
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas      1040 Mar 16 06:53 memory_monitor_summary.json
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas    334874 Mar 16 06:53 log.48997926._001877.job.log.tgz.1
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas      6386 Mar 16 06:53 heartbeat.json
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas      8192 Mar 16 06:53 boinc_mmap_file
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas        27 Mar 16 06:53 wrapper_checkpoint.txt
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas        95 Mar 16 06:54 pilot_heartbeat.json
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas      4890 Mar 16 06:54 pilotlog.txt
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas    759604 Mar 16 06:54 log.48997926._001877.job.log.1
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas       357 Mar 16 06:54 output.list
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas       620 Mar 16 06:54 runtime_log
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas   1116160 Mar 16 06:54 result.tar.gz
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas      9341 Mar 16 06:54 runtime_log.err
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas       648 Mar 16 06:54 7IgLDmMRLJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVjVLDmnGSRVo.diag
[2026-03-16 06:54:18] -rw-r--r--. 1 boincer umatlas     21631 Mar 16 06:54 stderr.txt
[2026-03-16 06:54:18] HITS file was successfully produced:
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas 267628492 Mar 16 06:52 shared/HITS.pool.root.1
[2026-03-16 06:54:18]  *** Contents of shared directory: ***
[2026-03-16 06:54:18] total 596968
[2026-03-16 06:54:18] -rw-r--r--. 2 boincer umatlas 341926465 Mar 16 05:27 ATLAS.root_0
[2026-03-16 06:54:18] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 05:27 start_atlas.sh
[2026-03-16 06:54:18] -rw-r--r--. 2 boincer umatlas    597954 Mar 16 05:27 input.tar.gz
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas 267628492 Mar 16 06:52 HITS.pool.root.1
[2026-03-16 06:54:18] -rw-------. 1 boincer umatlas   1116160 Mar 16 06:54 result.tar.gz
06:54:20 (556424): run_atlas exited; CPU time 38661.345152
06:54:20 (556424): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN