Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:03:11 (1266211): wrapper (7.7.26015): starting
05:03:11 (1266211): wrapper: running run_atlas (--nthreads 9)
[2026-03-16 05:03:11] Arguments: --nthreads 9
[2026-03-16 05:03:11] Threads: 9
[2026-03-16 05:03:11] Checking for CVMFS
[2026-03-16 05:03:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 05:03:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 05:03:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 05:03:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 05:03:12] 2.13.3.0 9943 115598 307716 157346 0 235 19862564 39288832 3060 16776704 0 140174640 99.595 212719726 33722 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 05:03:12] CVMFS is ok
[2026-03-16 05:03:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 05:03:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 05:03:12] Further information can be found at the LHC@home message board.
[2026-03-16 05:03:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 05:03:12] Checking for apptainer binary...
[2026-03-16 05:03:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 05:03:12] Running /usr/bin/apptainer --version
[2026-03-16 05:03:12] apptainer version 1.4.5-2.el9
[2026-03-16 05:03:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 05:03:12] c-210-6.aglt2.org
[2026-03-16 05:03:12] apptainer works
[2026-03-16 05:03:12] Set ATHENA_PROC_NUMBER=9
[2026-03-16 05:03:12] Set ATHENA_CORE_NUMBER=9
[2026-03-16 05:03:12] Starting ATLAS job with PandaID=7056653913
[2026-03-16 05:03:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 06:47:39]  *** The last 200 lines of the pilot log: ***
[2026-03-16 06:47:39] 2026-03-16 10:46:57,418 | INFO     | intersect: -8347938135.305337
[2026-03-16 06:47:39] 2026-03-16 10:46:57,419 | INFO     | chi2: 0.02053294383171524
[2026-03-16 06:47:39] 2026-03-16 10:46:57,419 | INFO     | current chi2=0.02053294383171524 (change=98.33475106270798 %)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,419 | INFO     | sum of square deviations: 241429643.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,419 | INFO     | sum of deviations: 970487948.5000002
[2026-03-16 06:47:39] 2026-03-16 10:46:57,420 | INFO     | mean x: 1773655207.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,420 | INFO     | mean y: 2567493.9891304346
[2026-03-16 06:47:39] 2026-03-16 10:46:57,420 | INFO     | intersect: -7127091409.052105
[2026-03-16 06:47:39] 2026-03-16 10:46:57,420 | INFO     | chi2: 0.006605259399718782
[2026-03-16 06:47:39] 2026-03-16 10:46:57,420 | INFO     | current chi2=0.006605259399718782 (change=67.83091867462142 %)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,420 | INFO     | sum of square deviations: 204163828.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,421 | INFO     | sum of deviations: 1587370365.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,421 | INFO     | mean x: 1773655360.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,421 | INFO     | mean y: 2565067.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,421 | INFO     | intersect: -13787575839.779072
[2026-03-16 06:47:39] 2026-03-16 10:46:57,421 | INFO     | chi2: 0.00035925504805994096
[2026-03-16 06:47:39] 2026-03-16 10:46:57,422 | INFO     | current chi2=0.00035925504805994096 (change=94.56107585910651 %)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,422 | INFO     | sum of square deviations: 170944600.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,422 | INFO     | sum of deviations: 1158860096.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,422 | INFO     | mean x: 1773655512.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,422 | INFO     | mean y: 2567026.6463414636
[2026-03-16 06:47:39] 2026-03-16 10:46:57,423 | INFO     | intersect: -12021320199.750767
[2026-03-16 06:47:39] 2026-03-16 10:46:57,423 | INFO     | chi2: 0.00018679425604086334
[2026-03-16 06:47:39] 2026-03-16 10:46:57,423 | INFO     | current chi2=0.00018679425604086334 (change=48.00511306672102 %)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,423 | INFO     | sum of square deviations: 141539398.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,424 | INFO     | sum of deviations: 852262903.0000001
[2026-03-16 06:47:39] 2026-03-16 10:46:57,424 | INFO     | mean x: 1773655665.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,424 | INFO     | mean y: 2568617.077922078
[2026-03-16 06:47:39] 2026-03-16 10:46:57,424 | INFO     | intersect: -10677291176.979528
[2026-03-16 06:47:39] 2026-03-16 10:46:57,424 | INFO     | chi2: 0.00011454727416039256
[2026-03-16 06:47:39] 2026-03-16 10:46:57,424 | INFO     | current chi2=0.00011454727416039256 (change=38.6773037949657 %)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,424 | INFO     | sum of square deviations: 115715658.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | sum of deviations: 628407024.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | mean x: 1773655817.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | mean y: 2569930.902777778
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | intersect: -9629469449.301844
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | chi2: 7.210810604842875e-05
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | current chi2=7.210810604842875e-05 (change=37.04947884882813 %)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | sum of square deviations: 93240818.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | sum of deviations: 460838652.0000001
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | mean x: 1773655970.0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | mean y: 2571069.7462686566
[2026-03-16 06:47:39] 2026-03-16 10:46:57,425 | INFO     | intersect: -8763645742.364416
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | chi2: 5.4448793275059754e-05
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | current chi2=5.4448793275059754e-05 (change=24.490052146854023 %)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | left removable region: 70
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | sum of square deviations: 5441962.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | sum of deviations: 15296512.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | mean x: 1773656854.5
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | mean y: 2575928.1153846155
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | intersect: -4982898382.957125
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | chi2: 9.131743105813184e-06
[2026-03-16 06:47:39] 2026-03-16 10:46:57,426 | INFO     | current memory leak: 2.81 B/s (using 26 data points, chi2=0.00)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | could have reported an average CPU frequency of 2720 MHz (7 samples)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | ..............................
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . Timing measurements:
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . get job = 0 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . initial setup = 5 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . payload setup = 3 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . stage-in = 0 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . payload execution = 6194 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . stage-out = 0 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | . log creation = 0 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,427 | INFO     | ..............................
[2026-03-16 06:47:39] 2026-03-16 10:46:57,917 | INFO     | 
[2026-03-16 06:47:39] 2026-03-16 10:46:57,917 | INFO     | job summary report
[2026-03-16 06:47:39] 2026-03-16 10:46:57,917 | INFO     | --------------------------------------------------
[2026-03-16 06:47:39] 2026-03-16 10:46:57,917 | INFO     | PanDA job id: 7056653913
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | task id: 48967102
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | errors: (none)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | pilot state: finished 
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | transexitcode: 0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | exeerrorcode: 0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | exeerrordiag: 
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | exitcode: 0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | exitmsg: OK
[2026-03-16 06:47:39] 2026-03-16 10:46:57,918 | INFO     | cpuconsumptiontime: 50912 s
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | nevents: 400
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | neventsw: 0
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | pid: 1280544
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | pgrp: 1280544
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | corecount: 9
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | event service: False
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | sizes: {0: 2280254, 11: 2280254, 6201: 2307183, 6203: 2316375}
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | --------------------------------------------------
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | 
[2026-03-16 06:47:39] 2026-03-16 10:46:57,919 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-16 06:47:39] 2026-03-16 10:46:57,936 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,939 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 06:47:39] 2026-03-16 10:46:57,939 | INFO     | job 7056653913 has completed (purged errors)
[2026-03-16 06:47:39] 2026-03-16 10:46:57,939 | INFO     | overall cleanup function is called
[2026-03-16 06:47:39] 2026-03-16 10:46:58,947 | INFO     | --- collectZombieJob: --- 10, [1280544]
[2026-03-16 06:47:39] 2026-03-16 10:46:58,947 | INFO     | zombie collector waiting for pid 1280544
[2026-03-16 06:47:39] 2026-03-16 10:46:58,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 06:47:39] 2026-03-16 10:46:58,948 | INFO     | collected zombie processes
[2026-03-16 06:47:39] 2026-03-16 10:46:58,948 | INFO     | will attempt to kill all subprocesses of pid=1280544
[2026-03-16 06:47:39] 2026-03-16 10:46:59,216 | INFO     | process IDs to be killed: [1280544] (in reverse order)
[2026-03-16 06:47:39] 2026-03-16 10:46:59,294 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 06:47:39] 2026-03-16 10:46:59,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 06:47:39] 2026-03-16 10:46:59,303 | INFO     | did not find any defunct processes belonging to 1280544
[2026-03-16 06:47:39] 2026-03-16 10:46:59,312 | INFO     | did not find any defunct processes belonging to 1280544
[2026-03-16 06:47:39] 2026-03-16 10:46:59,312 | INFO     | ready for new job
[2026-03-16 06:47:39] 2026-03-16 10:46:59,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 06:47:39] 2026-03-16 10:46:59,314 | INFO     | **************************************
[2026-03-16 06:47:39] 2026-03-16 10:46:59,315 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 06:47:39] 2026-03-16 10:46:59,315 | INFO     | **************************************
[2026-03-16 06:47:39] 2026-03-16 10:46:59,315 | INFO     | 
[2026-03-16 06:47:39] 2026-03-16 10:46:59,317 | INFO     | architecture information:
[2026-03-16 06:47:39] 2026-03-16 10:46:59,317 | INFO     | executing command: cat /etc/os-release
[2026-03-16 06:47:39] 2026-03-16 10:46:59,329 | INFO     | cat /etc/os-release:
[2026-03-16 06:47:39] NAME="CentOS Linux"
[2026-03-16 06:47:39] VERSION="7 (Core)"
[2026-03-16 06:47:39] ID="centos"
[2026-03-16 06:47:39] ID_LIKE="rhel fedora"
[2026-03-16 06:47:39] VERSION_ID="7"
[2026-03-16 06:47:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 06:47:39] ANSI_COLOR="0;31"
[2026-03-16 06:47:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 06:47:39] HOME_URL="https://www.centos.org/"
[2026-03-16 06:47:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 06:47:39] 
[2026-03-16 06:47:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 06:47:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 06:47:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 06:47:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 06:47:39] 
[2026-03-16 06:47:39] 2026-03-16 10:46:59,329 | INFO     | **************************************
[2026-03-16 06:47:39] 2026-03-16 10:46:59,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-16 06:47:39] 2026-03-16 10:46:59,846 | INFO     | sufficient remaining disk space (49900683264 B)
[2026-03-16 06:47:39] 2026-03-16 10:46:59,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 06:47:39] 2026-03-16 10:46:59,847 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 06:47:39] 2026-03-16 10:46:59,847 | INFO     | update_server=False
[2026-03-16 06:47:39] 2026-03-16 10:46:59,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 06:47:39] 2026-03-16 10:46:59,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 06:47:39] 2026-03-16 10:46:59,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 06:47:39] 2026-03-16 10:46:59,848 | INFO     | aborting loop
[2026-03-16 06:47:39] 2026-03-16 10:47:00,092 | INFO     | all payload control threads have been joined
[2026-03-16 06:47:39] 2026-03-16 10:47:00,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 06:47:39] 2026-03-16 10:47:00,394 | INFO     | all job control threads have been joined
[2026-03-16 06:47:39] 2026-03-16 10:47:00,684 | INFO     | all data control threads have been joined
[2026-03-16 06:47:39] 2026-03-16 10:47:00,852 | INFO     | [job] retrieve thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:00,853 | INFO     | [job] job monitor thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,064 | INFO     | [payload] failed_post thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,097 | INFO     | [payload] control thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,181 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,182 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,400 | INFO     | [job] control thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,689 | INFO     | [data] control thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,905 | INFO     | [payload] validate_post thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:01,992 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:02,073 | INFO     | [data] copytool_in thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:02,181 | INFO     | [job] validate thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:02,345 | INFO     | [data] copytool_out thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:02,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 06:47:39] 2026-03-16 10:47:03,493 | INFO     | [job] queue monitor thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:03,853 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:10,368 | INFO     | job.realtimelogging is not enabled
[2026-03-16 06:47:39] 2026-03-16 10:47:11,375 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 06:47:39] 2026-03-16 10:47:29,581 | INFO     | PID=1270278 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 06:47:39] 2026-03-16 10:47:29,582 | INFO     | .. there are 14 such processes running
[2026-03-16 06:47:39] 2026-03-16 10:47:29,583 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 06:47:39] 2026-03-16 10:47:29,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 06:47:39] 2026-03-16 10:47:29,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 06:47:39] 2026-03-16 10:47:33,010 | INFO     | [monitor] cgroup control has ended
[2026-03-16 06:47:39] 2026-03-16 10:47:33,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945623447360)>', '<ExcThread(monitor, started 139945251428096)>']
[2026-03-16 06:47:39] 2026-03-16 10:47:34,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 06:47:39] 2026-03-16 10:47:34,616 | INFO     | [monitor] control thread has ended
[2026-03-16 06:47:39] 2026-03-16 10:47:38,967 | INFO     | all workflow threads have been joined
[2026-03-16 06:47:39] 2026-03-16 10:47:38,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 06:47:39] 2026-03-16 10:47:38,968 | INFO     | traces error code: 0
[2026-03-16 06:47:39] 2026-03-16 10:47:38,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 06:47:39] 2026-03-16 10:47:39,221 [wrapper] ==== pilot stdout END ====
[2026-03-16 06:47:39] 2026-03-16 10:47:39,237 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 06:47:39] 2026-03-16 10:47:39,252 [wrapper] pilotpid: 1270278
[2026-03-16 06:47:39] 2026-03-16 10:47:39,286 [wrapper] Pilot exit status: 0
[2026-03-16 06:47:39] 2026-03-16 10:47:39,400 [wrapper] pandaids: 7056653913
[2026-03-16 06:47:39] 2026-03-16 10:47:39,564 [wrapper] cleanup supervisor_pilot 1533916 1270279
[2026-03-16 06:47:39] 2026-03-16 10:47:39,587 [wrapper] Test setup, not cleaning
[2026-03-16 06:47:39] 2026-03-16 10:47:39,597 [wrapper] apfmon messages muted
[2026-03-16 06:47:39] 2026-03-16 10:47:39,600 [wrapper] ==== wrapper stdout END ====
[2026-03-16 06:47:39] 2026-03-16 10:47:39,602 [wrapper] ==== wrapper stderr END ====
[2026-03-16 06:47:39]  *** Error codes and diagnostics ***
[2026-03-16 06:47:39]     "exeErrorCode": 0,
[2026-03-16 06:47:39]     "exeErrorDiag": "",
[2026-03-16 06:47:39]     "pilotErrorCode": 0,
[2026-03-16 06:47:39]     "pilotErrorDiag": "",
[2026-03-16 06:47:39]  *** Listing of results directory ***
[2026-03-16 06:47:39] total 406224
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 04:25 pilot3.tar.gz
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 05:01 queuedata.json
[2026-03-16 06:47:39] -rwx------. 1 boincer umatlas     36322 Mar 16 05:01 runpilot2-wrapper.sh
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas       100 Mar 16 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 06:47:39] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 16 05:03 run_atlas
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas       105 Mar 16 05:03 job.xml
[2026-03-16 06:47:39] -rw-r--r--. 2 boincer umatlas 215484680 Mar 16 05:03 EVNT.48967100._000055.pool.root.1
[2026-03-16 06:47:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 05:03 start_atlas.sh
[2026-03-16 06:47:39] drwxrwx--x. 2 boincer umatlas      4096 Mar 16 05:03 shared
[2026-03-16 06:47:39] -rw-r--r--. 2 boincer umatlas    597529 Mar 16 05:03 input.tar.gz
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas         0 Mar 16 05:03 boinc_lockfile
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas      2578 Mar 16 05:03 pandaJob.out
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas        57 Mar 16 05:03 setup.sh.local
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas   1006405 Mar 16 05:03 agis_schedconf.cvmfs.json
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas   1511579 Mar 16 05:03 agis_ddmendpoints.agis.ALL.json
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas       434 Mar 16 05:03 workernode_map.json
[2026-03-16 06:47:39] drwx------. 5 boincer umatlas      4096 Mar 16 05:03 pilot3
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas      6661 Mar 16 06:38 init_data.xml
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas 194041896 Mar 16 06:46 HITS.48967102._001390.pool.root.1
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas       529 Mar 16 06:46 boinc_task_state.xml
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas      1040 Mar 16 06:46 memory_monitor_summary.json
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas    353016 Mar 16 06:46 log.48967102._001390.job.log.tgz.1
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas      6370 Mar 16 06:46 heartbeat.json
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas        95 Mar 16 06:47 pilot_heartbeat.json
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas        27 Mar 16 06:47 wrapper_checkpoint.txt
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas      8192 Mar 16 06:47 boinc_mmap_file
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas      4892 Mar 16 06:47 pilotlog.txt
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas    901960 Mar 16 06:47 log.48967102._001390.job.log.1
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas       357 Mar 16 06:47 output.list
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas       620 Mar 16 06:47 runtime_log
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas   1269760 Mar 16 06:47 result.tar.gz
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas      9336 Mar 16 06:47 runtime_log.err
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas       651 Mar 16 06:47 KLjMDmb0IM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyfsLDmyEkLYm.diag
[2026-03-16 06:47:39] -rw-r--r--. 1 boincer umatlas     20899 Mar 16 06:47 stderr.txt
[2026-03-16 06:47:39] HITS file was successfully produced:
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas 194041896 Mar 16 06:46 shared/HITS.pool.root.1
[2026-03-16 06:47:39]  *** Contents of shared directory: ***
[2026-03-16 06:47:39] total 401776
[2026-03-16 06:47:39] -rw-r--r--. 2 boincer umatlas 215484680 Mar 16 05:03 ATLAS.root_0
[2026-03-16 06:47:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 05:03 start_atlas.sh
[2026-03-16 06:47:39] -rw-r--r--. 2 boincer umatlas    597529 Mar 16 05:03 input.tar.gz
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas 194041896 Mar 16 06:46 HITS.pool.root.1
[2026-03-16 06:47:39] -rw-------. 1 boincer umatlas   1269760 Mar 16 06:47 result.tar.gz
06:47:41 (1266211): run_atlas exited; CPU time 51031.394782
06:47:41 (1266211): called boinc_finish(0)

</stderr_txt>
]]>

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